(Linear) (Six-base) MAPSORT of: KIEE2024.seq Check: 7536 from: 1 to: 1812 KIEE2024.orf With 182 enzymes: SgfI * July 15, 2010 18:53 .. AarI CACCTGCnnnn'nnnn_ Cuts at: 0 1698 1812 Size: 1698 114 AclI AA'CG_TT Cuts at: 0 223 1812 Size: 223 1589 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 273 1812 Size: 273 1539 AflIII A'CryG_T Cuts at: 0 1003 1812 Size: 1003 809 AhdI GACnn_n'nnGTC Cuts at: 0 538 1812 Size: 538 1274 AleI CACnn'nnGTG Cuts at: 0 1649 1812 Size: 1649 163 AloI GAACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 425 457 1812 Size: 425 32 1355 Fragments arranged by size: 1355 425 32 AlwNI CAG_nnn'CTG Cuts at: 0 1583 1662 1812 Size: 1583 79 150 Fragments arranged by size: 1583 150 79 ApoI r'AATT_y Cuts at: 0 490 1291 1812 Size: 490 801 521 Fragments arranged by size: 801 521 490 AvaI C'yCGr_G Cuts at: 0 424 1776 1812 Size: 424 1352 36 Fragments arranged by size: 1352 424 36 BamHI G'GATC_C Cuts at: 0 1175 1812 Size: 1175 637 BanI G'GyrC_C Cuts at: 0 265 355 1812 Size: 265 90 1457 Fragments arranged by size: 1457 265 90 BanII G_rGCy'C Cuts at: 0 195 587 1735 1812 Size: 195 392 1148 77 Fragments arranged by size: 1148 392 195 77 BbeI G_GCGC'C Cuts at: 0 269 1812 Size: 269 1543 BbsI GAAGACnn'nnnn_ Cuts at: 0 142 1812 Size: 142 1670 BbvCI CC'TCA_GC Cuts at: 0 890 1346 1812 Size: 890 456 466 Fragments arranged by size: 890 466 456 BciVI GTATCCnnnnn_n' Cuts at: 0 1309 1812 Size: 1309 503 BclI T'GATC_A Cuts at: 0 1023 1433 1812 Size: 1023 410 379 Fragments arranged by size: 1023 410 379 BglII A'GATC_T Cuts at: 0 1331 1812 Size: 1331 481 BmgBI CAC'GTC Cuts at: 0 1006 1812 Size: 1006 806 BmrI ACTGGGnnnn_n' Cuts at: 0 618 1261 1638 1812 Size: 618 643 377 174 Fragments arranged by size: 643 618 377 174 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 120 263 746 1812 Size: 120 143 483 1066 Fragments arranged by size: 1066 483 143 120 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 716 1812 Size: 716 1096 Bpu10I CC'TnA_GC Cuts at: 0 890 1346 1812 Size: 890 456 466 Fragments arranged by size: 890 466 456 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 170 1812 Size: 170 1642 BsaI GGTCTCn'nnnn_ Cuts at: 0 525 1812 Size: 525 1287 BsaAI yAC'GTr Cuts at: 0 1320 1812 Size: 1320 492 BsaHI Gr'CG_yC Cuts at: 0 266 1193 1812 Size: 266 927 619 Fragments arranged by size: 927 619 266 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 425 455 867 897 922 952 1812 Size: 425 30 412 30 25 30 860 Fragments arranged by size: 860 425 412 30 30 30 25 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 146 306 309 577 675 1342 1363 1692 Size: 146 160 3 268 98 667 21 329 Cuts at: 1692 1812 Size: 120 Fragments arranged by size: 667 329 268 160 146 120 98 21 3 BseYI C'CCAG_C Cuts at: 0 345 635 952 1670 1726 1812 Size: 345 290 317 718 56 86 Fragments arranged by size: 718 345 317 290 86 56 BsiEI CG_ry'CG Cuts at: 0 1469 1812 Size: 1469 343 BsiHKAI G_wGCw'C Cuts at: 0 33 195 587 1812 Size: 33 162 392 1225 Fragments arranged by size: 1225 392 162 33 Bsp1286I G_dGCh'C Cuts at: 0 33 195 587 1735 1812 Size: 33 162 392 1148 77 Fragments arranged by size: 1148 392 162 77 33 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 1582 1698 1812 Size: 1582 116 114 Fragments arranged by size: 1582 116 114 BsrBI CCG'CTC Cuts at: 0 1416 1812 Size: 1416 396 BsrDI GCAATG_nn' Cuts at: 0 300 417 917 1812 Size: 300 117 500 895 Fragments arranged by size: 895 500 300 117 BssSI C'ACGA_G Cuts at: 0 237 1812 Size: 237 1575 BstXI CCAn_nnnn'nTGG Cuts at: 0 859 1812 Size: 859 953 BstYI r'GATC_y Cuts at: 0 1175 1331 1812 Size: 1175 156 481 Fragments arranged by size: 1175 481 156 Bsu36I CC'TnA_GG Cuts at: 0 967 1812 Size: 967 845 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 0 1393 1812 Size: 1393 419 BtsI GCAGTG_nn' Cuts at: 0 591 1584 1812 Size: 591 993 228 Fragments arranged by size: 993 591 228 EaeI y'GGCC_r Cuts at: 0 605 914 1554 1812 Size: 605 309 640 258 Fragments arranged by size: 640 605 309 258 EarI CTCTTCn'nnn_ Cuts at: 0 312 715 1049 1812 Size: 312 403 334 763 Fragments arranged by size: 763 403 334 312 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 1426 1507 1812 Size: 1426 81 305 Fragments arranged by size: 1426 305 81 EcoICRI GAG'CTC Cuts at: 0 193 585 1812 Size: 193 392 1227 Fragments arranged by size: 1227 392 193 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 273 716 1812 Size: 273 443 1096 Fragments arranged by size: 1096 443 273 EcoO109I rG'GnC_Cy Cuts at: 0 963 1812 Size: 963 849 EcoRI G'AATT_C Cuts at: 0 1291 1812 Size: 1291 521 EcoRV GAT'ATC Cuts at: 0 5 1812 Size: 5 1807 FalI AAGnnnnnCTTnnnnnnnn_nnnnn' Cuts at: 0 38 579 1812 Size: 38 541 1233 Fragments arranged by size: 1233 541 38 FspI TGC'GCA Cuts at: 0 597 1812 Size: 597 1215 HaeII r_GCGC'y Cuts at: 0 269 1374 1812 Size: 269 1105 438 Fragments arranged by size: 1105 438 269 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 524 556 1791 1812 Size: 524 32 1235 21 Fragments arranged by size: 1235 524 32 21 HincII GTy'rAC Cuts at: 0 227 681 1257 1769 1812 Size: 227 454 576 512 43 Fragments arranged by size: 576 512 454 227 43 HpaI GTT'AAC Cuts at: 0 227 1812 Size: 227 1585 KasI G'GCGC_C Cuts at: 0 265 1812 Size: 265 1547 MfeI C'AATT_G Cuts at: 0 482 1812 Size: 482 1330 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 0 184 1812 Size: 184 1628 MscI TGG'CCA Cuts at: 0 607 916 1812 Size: 607 309 896 Fragments arranged by size: 896 607 309 MslI CAynn'nnrTG Cuts at: 0 1649 1812 Size: 1649 163 MspA1I CmG'CkG Cuts at: 0 339 648 822 1721 1812 Size: 339 309 174 899 91 Fragments arranged by size: 899 339 309 174 91 NarI GG'CG_CC Cuts at: 0 266 1812 Size: 266 1546 PflMI CCAn_nnn'nTGG Cuts at: 0 283 352 1812 Size: 283 69 1460 Fragments arranged by size: 1460 283 69 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 425 457 1812 Size: 425 32 1355 Fragments arranged by size: 1355 425 32 PpuMI rG'GwC_Cy Cuts at: 0 963 1812 Size: 963 849 PstI C_TGCA'G Cuts at: 0 401 578 1394 1579 1667 1695 1812 Size: 401 177 816 185 88 28 117 Fragments arranged by size: 816 401 185 177 117 88 28 PvuII CAG'CTG Cuts at: 0 339 648 1812 Size: 339 309 1164 Fragments arranged by size: 1164 339 309 SacI G_AGCT'C Cuts at: 0 195 587 1812 Size: 195 392 1225 Fragments arranged by size: 1225 392 195 SbfI CC_TGCA'GG Cuts at: 0 1667 1812 Size: 1667 145 SfcI C'TryA_G Cuts at: 0 251 397 574 930 1390 1575 1663 1691 Size: 251 146 177 356 460 185 88 28 Cuts at: 1691 1812 Size: 121 Fragments arranged by size: 460 356 251 185 177 146 121 88 28 SfoI GGC'GCC Cuts at: 0 267 1812 Size: 267 1545 SmaI CCC'GGG Cuts at: 0 1778 1812 Size: 1778 34 SmlI C'TyrA_G Cuts at: 0 185 1812 Size: 185 1627 SpeI A'CTAG_T Cuts at: 0 462 1812 Size: 462 1350 SspI AAT'ATT Cuts at: 0 79 1812 Size: 79 1733 StuI AGG'CCT Cuts at: 0 1305 1812 Size: 1305 507 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 294 1812 Size: 294 1518 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 1331 1648 1812 Size: 1331 317 164 Fragments arranged by size: 1331 317 164 XmaI C'CCGG_G Cuts at: 0 1776 1812 Size: 1776 36 XmnI GAAnn'nnTTC Cuts at: 0 204 382 440 491 1295 1785 1812 Size: 204 178 58 51 804 490 27 Fragments arranged by size: 804 490 204 178 58 51 27 Enzymes that do cut: AarI AclI AcuI AflIII AhdI AleI AloI AlwNI ApoI AvaI BamHI BanI BanII BbeI BbsI BbvCI BciVI BclI BglII BmgBI BmrI BplI BpmI Bpu10I BpuEI BsaI BsaAI BsaHI BsaXI BseRI BseYI BsiEI BsiHKAI Bsp1286I BspMI BsrBI BsrDI BssSI BstXI BstYI Bsu36I BtgZI BtsI EaeI EarI EciI EcoICRI Eco57MI EcoO109I EcoRI EcoRV FalI FspI HaeII Hin4I HincII HpaI KasI MfeI MmeI MscI MslI MspA1I NarI PflMI PpiI PpuMI PstI PvuII SacI SbfI SfcI SfoI SmaI SmlI SpeI SspI StuI TaqII XcmI XmaI XmnI Enzymes that do not cut: AatII AccI Acc65I AfeI AflII AgeI AlfI ApaI ApaLI AscI AseI AsiSI AvrII BaeI BcgI BfrBI BglI BlpI Bme1580I BmtI BsaBI BsaWI BsgI BsiWI BsmI BsmBI BspEI BspHI BsrFI BsrGI BssHII BstAPI BstBI BstEII BstZ17I BtgI ClaI CspCI DraI DraIII DrdI EagI EcoNI FseI FspAI HindIII KpnI MluI NaeI NcoI NdeI NgoMIV NheI NotI NruI NsiI NspI PacI PasI PciI PfoI PmeI PmlI PshAI PsiI PspOMI PspXI PsrI PvuI RsrII SacII SalI SanDI SapI ScaI SexAI SfiI SgfI SgrAI SnaBI SphI SrfI StyI SwaI TatI TstI Tth111I XbaI XhoI ZraI