FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3130, 323 aa 1>>>pF1KE3130 323 - 323 aa - 323 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.4115+/-0.00111; mu= 3.2039+/- 0.066 mean_var=198.3825+/-41.225, 0's: 0 Z-trim(109.5): 18 B-trim: 232 in 2/50 Lambda= 0.091059 statistics sampled from 10903 (10914) to 10903 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.684), E-opt: 0.2 (0.335), width: 16 Scan time: 2.660 The best scores are: opt bits E(32554) CCDS6253.2 OTUD6B gene_id:51633|Hs108|chr8 ( 323) 2081 285.7 3.5e-77 CCDS69513.1 OTUD6B gene_id:51633|Hs108|chr8 ( 192) 1228 173.4 1.3e-43 CCDS14395.1 OTUD6A gene_id:139562|Hs108|chrX ( 288) 1057 151.1 9.9e-37 >>CCDS6253.2 OTUD6B gene_id:51633|Hs108|chr8 (323 aa) initn: 2081 init1: 2081 opt: 2081 Z-score: 1499.2 bits: 285.7 E(32554): 3.5e-77 Smith-Waterman score: 2081; 100.0% identity (100.0% similar) in 323 aa overlap (1-323:1-323) 10 20 30 40 50 60 pF1KE3 MEPRVRVEGWKVPTSRCRFLLARVLGYLVVMEAVLTEELDEEEQLLRRHRKEKKELQAKI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS62 MEPRVRVEGWKVPTSRCRFLLARVLGYLVVMEAVLTEELDEEEQLLRRHRKEKKELQAKI 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 QGMKNAVPKNDKKRRKQLTEDVAKLEKEMEQKHREELEQLKLTTKENKIDSVAVNISNLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS62 QGMKNAVPKNDKKRRKQLTEDVAKLEKEMEQKHREELEQLKLTTKENKIDSVAVNISNLV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 LENQPPRISKAQKRREKKAALEKEREERIAEAEIENLTGARHMESEKLAQILAARQLEIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS62 LENQPPRISKAQKRREKKAALEKEREERIAEAEIENLTGARHMESEKLAQILAARQLEIK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 QIPSDGHCMYKAIEDQLKEKDCALTVVALRSQTAEYMQSHVEDFLPFLTNPNTGDMYTPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS62 QIPSDGHCMYKAIEDQLKEKDCALTVVALRSQTAEYMQSHVEDFLPFLTNPNTGDMYTPE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 EFQKYCEDIVNTAAWGGQLELRALSHILQTPIEIIQADSPPIIVGEEYSKKPLILVYMRH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS62 EFQKYCEDIVNTAAWGGQLELRALSHILQTPIEIIQADSPPIIVGEEYSKKPLILVYMRH 250 260 270 280 290 300 310 320 pF1KE3 AYGLGEHYNSVTRLVNIVTENCS ::::::::::::::::::::::: CCDS62 AYGLGEHYNSVTRLVNIVTENCS 310 320 >>CCDS69513.1 OTUD6B gene_id:51633|Hs108|chr8 (192 aa) initn: 1228 init1: 1228 opt: 1228 Z-score: 896.7 bits: 173.4 E(32554): 1.3e-43 Smith-Waterman score: 1228; 99.5% identity (100.0% similar) in 189 aa overlap (135-323:4-192) 110 120 130 140 150 160 pF1KE3 KENKIDSVAVNISNLVLENQPPRISKAQKRREKKAALEKEREERIAEAEIENLTGARHME .::::::::::::::::::::::::::::: CCDS69 MISKEKKAALEKEREERIAEAEIENLTGARHME 10 20 30 170 180 190 200 210 220 pF1KE3 SEKLAQILAARQLEIKQIPSDGHCMYKAIEDQLKEKDCALTVVALRSQTAEYMQSHVEDF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 SEKLAQILAARQLEIKQIPSDGHCMYKAIEDQLKEKDCALTVVALRSQTAEYMQSHVEDF 40 50 60 70 80 90 230 240 250 260 270 280 pF1KE3 LPFLTNPNTGDMYTPEEFQKYCEDIVNTAAWGGQLELRALSHILQTPIEIIQADSPPIIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS69 LPFLTNPNTGDMYTPEEFQKYCEDIVNTAAWGGQLELRALSHILQTPIEIIQADSPPIIV 100 110 120 130 140 150 290 300 310 320 pF1KE3 GEEYSKKPLILVYMRHAYGLGEHYNSVTRLVNIVTENCS ::::::::::::::::::::::::::::::::::::::: CCDS69 GEEYSKKPLILVYMRHAYGLGEHYNSVTRLVNIVTENCS 160 170 180 190 >>CCDS14395.1 OTUD6A gene_id:139562|Hs108|chrX (288 aa) initn: 1056 init1: 507 opt: 1057 Z-score: 772.9 bits: 151.1 E(32554): 9.9e-37 Smith-Waterman score: 1057; 56.7% identity (85.5% similar) in 275 aa overlap (41-314:7-275) 20 30 40 50 60 70 pF1KE3 KVPTSRCRFLLARVLGYLVVMEAVLTEELDEEEQLLRRHRKEKKELQAKIQGMKNAVPKN :....::::..:..::::.:...::.:::. CCDS14 MDDPKSEQQRILRRHQRERQELQAQIRSLKNSVPKT 10 20 30 80 90 100 110 120 130 pF1KE3 DKKRRKQLTEDVAKLEKEMEQKHREELEQLKLTTKENKIDSVAVNISNLVLENQPPRISK :: .:::: .:::..: :: ::::.:::... ...:.::. ..... :::.::: :: CCDS14 DKTKRKQLLQDVARMEAEMAQKHRQELEKFQ---DDSSIESVVEDLAKMNLENRPPRSSK 40 50 60 70 80 90 140 150 160 170 180 pF1KE3 AQKRREKKAALEKEREERIAEAEI-ENLTGARHMESEKLAQILAARQLEIKQIPSDGHCM :...::. . :.::.: : .::. :.:.: .. : :::: ::.:: ::.: ::.::::: CCDS14 AHRKRERMESEERERQESIFQAEMSEHLAGFKREEEEKLAAILGARGLEMKAIPADGHCM 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE3 YKAIEDQLKEKDCALTVVALRSQTAEYMQSHVEDFLPFLTNPNTGDMYTPEEFQKYCEDI :.::.::: ...: :: .:: ::..::..::::..::.:.: . ..:. ::..: CCDS14 YRAIQDQLV---FSVSVEMLRCRTASYMKKHVDEFLPFFSNPETSDSFGYDDFMIYCDNI 160 170 180 190 200 210 250 260 270 280 290 300 pF1KE3 VNTAAWGGQLELRALSHILQTPIEIIQADSPPIIVGEEYSKKPLILVYMRHAYGLGEHYN : :.:::::::::::::.:.::::.:::::: .:.:::: :::.::::.:.::.:::::: CCDS14 VRTTAWGGQLELRALSHVLKTPIEVIQADSPTLIIGEEYVKKPIILVYLRYAYSLGEHYN 220 230 240 250 260 270 310 320 pF1KE3 SVTRLVNIVTENCS ::: : CCDS14 SVTPLEAGAAGGVLPRLL 280 323 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 16:05:43 2016 done: Sun Nov 6 16:05:43 2016 Total Scan time: 2.660 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]