Result of FASTA (omim) for pFN21AB6662
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6662, 451 aa
  1>>>pF1KB6662 451 - 451 aa - 451 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.0370+/-0.000397; mu= 13.9058+/- 0.025
 mean_var=226.8888+/-47.100, 0's: 0 Z-trim(120.0): 454  B-trim: 1836 in 1/53
 Lambda= 0.085147
 statistics sampled from 34142 (34621) to 34142 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.74), E-opt: 0.2 (0.406), width:  16
 Scan time: 10.540

The best scores are:                                      opt bits E(85289)
NP_619729 (OMIM: 153622,176807,614266) macrophage  ( 451) 3054 387.9 2.9e-107
NP_619730 (OMIM: 153622,176807,614266) macrophage  ( 388) 2291 294.1 4.3e-79
NP_002436 (OMIM: 153622,176807,614266) macrophage  ( 358) 2287 293.6 5.8e-79
NP_776194 (OMIM: 611306) scavenger receptor class  ( 495)  643 91.8 4.4e-18
XP_005263375 (OMIM: 249500,606709) PREDICTED: neur ( 555)  438 66.7 1.8e-10
XP_011530689 (OMIM: 249500,606709) PREDICTED: neur ( 573)  438 66.7 1.8e-10
NP_003610 (OMIM: 249500,606709) neurotrypsin precu ( 875)  438 67.0 2.3e-10
NP_115587 (OMIM: 607318) lysyl oxidase homolog 4 p ( 756)  410 63.4 2.3e-09
XP_006718083 (OMIM: 607318) PREDICTED: lysyl oxida ( 757)  410 63.4 2.3e-09
XP_005270273 (OMIM: 607318) PREDICTED: lysyl oxida ( 757)  410 63.4 2.3e-09
NP_981961 (OMIM: 605545) scavenger receptor cystei (1121)  408 63.4 3.5e-09
XP_005253586 (OMIM: 605545) PREDICTED: scavenger r (1124)  408 63.4 3.5e-09
NP_004235 (OMIM: 605545) scavenger receptor cystei (1156)  408 63.4 3.6e-09
XP_016875720 (OMIM: 605545) PREDICTED: scavenger r (1161)  408 63.4 3.6e-09
XP_011518923 (OMIM: 606079) PREDICTED: scavenger r ( 766)  402 62.5 4.6e-09
XP_011518922 (OMIM: 606079) PREDICTED: scavenger r (1182)  402 62.7   6e-09
XP_011518921 (OMIM: 606079) PREDICTED: scavenger r (1182)  402 62.7   6e-09
XP_011518920 (OMIM: 606079) PREDICTED: scavenger r (1214)  402 62.7 6.1e-09
XP_011518918 (OMIM: 606079) PREDICTED: scavenger r (1421)  402 62.8 6.7e-09
XP_011518919 (OMIM: 606079) PREDICTED: scavenger r (1428)  402 62.8 6.7e-09
NP_777601 (OMIM: 606079) scavenger receptor cystei (1453)  402 62.8 6.8e-09
NP_001284579 (OMIM: 606079) scavenger receptor cys (1463)  402 62.8 6.8e-09
NP_542782 (OMIM: 607639) scavenger receptor cystei ( 575)  373 58.7 4.6e-08
NP_115992 (OMIM: 607163) lysyl oxidase homolog 3 i ( 753)  371 58.6 6.4e-08
XP_011531436 (OMIM: 607163) PREDICTED: lysyl oxida ( 753)  371 58.6 6.4e-08
NP_005558 (OMIM: 600626) galectin-3-binding protei ( 585)  368 58.1 7.1e-08
XP_016867239 (OMIM: 607639) PREDICTED: scavenger r ( 406)  355 56.3 1.7e-07
NP_002309 (OMIM: 606663) lysyl oxidase homolog 2 p ( 774)  359 57.2 1.8e-07
NP_001276093 (OMIM: 607163) lysyl oxidase homolog  ( 608)  353 56.3 2.6e-07
XP_011537717 (OMIM: 601969) PREDICTED: deleted in  (1766)  356 57.3 3.8e-07
XP_011537716 (OMIM: 601969) PREDICTED: deleted in  (1783)  356 57.3 3.9e-07
NP_004397 (OMIM: 601969) deleted in malignant brai (1785)  356 57.3 3.9e-07
XP_011537715 (OMIM: 601969) PREDICTED: deleted in  (2282)  355 57.3 4.9e-07
XP_016871287 (OMIM: 601969) PREDICTED: deleted in  (1990)  354 57.1 4.9e-07
NP_060049 (OMIM: 601969) deleted in malignant brai (2403)  355 57.4   5e-07
XP_011537713 (OMIM: 601969) PREDICTED: deleted in  (2403)  355 57.4   5e-07
XP_011537711 (OMIM: 601969) PREDICTED: deleted in  (2411)  355 57.4   5e-07
XP_011537710 (OMIM: 601969) PREDICTED: deleted in  (2411)  355 57.4   5e-07
XP_011537712 (OMIM: 601969) PREDICTED: deleted in  (2411)  355 57.4   5e-07
XP_011537709 (OMIM: 601969) PREDICTED: deleted in  (2411)  355 57.4   5e-07
NP_001307573 (OMIM: 601969) deleted in malignant b (2412)  355 57.4   5e-07
XP_011537705 (OMIM: 601969) PREDICTED: deleted in  (2413)  355 57.4   5e-07
XP_011537703 (OMIM: 601969) PREDICTED: deleted in  (2413)  355 57.4   5e-07
XP_011537704 (OMIM: 601969) PREDICTED: deleted in  (2413)  355 57.4   5e-07
NP_015568 (OMIM: 601969) deleted in malignant brai (2413)  355 57.4   5e-07
XP_011537707 (OMIM: 601969) PREDICTED: deleted in  (2413)  355 57.4   5e-07
XP_011537702 (OMIM: 601969) PREDICTED: deleted in  (2434)  355 57.4 5.1e-07
XP_006717728 (OMIM: 601969) PREDICTED: deleted in  (2510)  355 57.4 5.2e-07
XP_011537701 (OMIM: 601969) PREDICTED: deleted in  (2510)  355 57.4 5.2e-07
XP_011537700 (OMIM: 601969) PREDICTED: deleted in  (2521)  355 57.4 5.2e-07


>>NP_619729 (OMIM: 153622,176807,614266) macrophage scav  (451 aa)
 initn: 3054 init1: 3054 opt: 3054  Z-score: 2046.8  bits: 387.9 E(85289): 2.9e-107
Smith-Waterman score: 3054; 100.0% identity (100.0% similar) in 451 aa overlap (1-451:1-451)

               10        20        30        40        50        60
pF1KB6 MEQWDHFHNQQEDTDSCSESVKFDARSMTALLPPNPKNSPSLQEKLKSFKAALIALYLLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 MEQWDHFHNQQEDTDSCSESVKFDARSMTALLPPNPKNSPSLQEKLKSFKAALIALYLLV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 FAVLIPLIGIVAAQLLKWETKNCSVSSTNANDITQSLTGKGNDSEEEMRFQEVFMEHMSN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 FAVLIPLIGIVAAQLLKWETKNCSVSSTNANDITQSLTGKGNDSEEEMRFQEVFMEHMSN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 MEKRIQHILDMEANLMDTEHFQNFSMTTDQRFNDILLQLSTLFSSVQGHGNAIDEISKSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 MEKRIQHILDMEANLMDTEHFQNFSMTTDQRFNDILLQLSTLFSSVQGHGNAIDEISKSL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 ISLNTTLLDLQLNIENLNGKIQENTFKQQEEISKLEERVYNVSAEIMAMKEEQVHLEQEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 ISLNTTLLDLQLNIENLNGKIQENTFKQQEEISKLEERVYNVSAEIMAMKEEQVHLEQEI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 KGEVKVLNNITNDLRLKDWEHSQTLRNITLIQGPPGPPGEKGDRGPTGESGPRGFPGPIG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 KGEVKVLNNITNDLRLKDWEHSQTLRNITLIQGPPGPPGEKGDRGPTGESGPRGFPGPIG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 PPGLKGDRGAIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGGSGPHE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 PPGLKGDRGAIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGGSGPHE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB6 GRVEILHSGQWGTICDDRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 GRVEILHSGQWGTICDDRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCF
              370       380       390       400       410       420

              430       440       450 
pF1KB6 GRESSIEECKIRQWGTRACSHSEDAGVTCTL
       :::::::::::::::::::::::::::::::
NP_619 GRESSIEECKIRQWGTRACSHSEDAGVTCTL
              430       440       450 

>>NP_619730 (OMIM: 153622,176807,614266) macrophage scav  (388 aa)
 initn: 2281 init1: 2281 opt: 2291  Z-score: 1540.9  bits: 294.1 E(85289): 4.3e-79
Smith-Waterman score: 2458; 85.8% identity (86.0% similar) in 451 aa overlap (1-451:1-388)

               10        20        30        40        50        60
pF1KB6 MEQWDHFHNQQEDTDSCSESVKFDARSMTALLPPNPKNSPSLQEKLKSFKAALIALYLLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 MEQWDHFHNQQEDTDSCSESVKFDARSMTALLPPNPKNSPSLQEKLKSFKAALIALYLLV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 FAVLIPLIGIVAAQLLKWETKNCSVSSTNANDITQSLTGKGNDSEEEMRFQEVFMEHMSN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 FAVLIPLIGIVAAQLLKWETKNCSVSSTNANDITQSLTGKGNDSEEEMRFQEVFMEHMSN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 MEKRIQHILDMEANLMDTEHFQNFSMTTDQRFNDILLQLSTLFSSVQGHGNAIDEISKSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 MEKRIQHILDMEANLMDTEHFQNFSMTTDQRFNDILLQLSTLFSSVQGHGNAIDEISKSL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 ISLNTTLLDLQLNIENLNGKIQENTFKQQEEISKLEERVYNVSAEIMAMKEEQVHLEQEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 ISLNTTLLDLQLNIENLNGKIQENTFKQQEEISKLEERVYNVSAEIMAMKEEQVHLEQEI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 KGEVKVLNNITNDLRLKDWEHSQTLRNITLIQGPPGPPGEKGDRGPTGESGPRGFPGPIG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_619 KGEVKVLNNITNDLRLKDWEHSQTLRNITLIQGPPGPPGEKGDRGPTGESGPRGFPGPIG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 PPGLKGDRGAIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGGSGPHE
       ::::::::::::::::::::::::::::::::::::::::::::.               
NP_619 PPGLKGDRGAIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLS---------------
              310       320       330       340                    

              370       380       390       400       410       420
pF1KB6 GRVEILHSGQWGTICDDRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCF
                                                       ::::::::::::
NP_619 ------------------------------------------------TGPIWLNEVFCF
                                                         350       

              430       440       450 
pF1KB6 GRESSIEECKIRQWGTRACSHSEDAGVTCTL
       :::::::::::::::::::::::::::::::
NP_619 GRESSIEECKIRQWGTRACSHSEDAGVTCTL
       360       370       380        

>>NP_002436 (OMIM: 153622,176807,614266) macrophage scav  (358 aa)
 initn: 2447 init1: 2287 opt: 2287  Z-score: 1538.6  bits: 293.6 E(85289): 5.8e-79
Smith-Waterman score: 2287; 99.7% identity (99.7% similar) in 346 aa overlap (1-346:1-346)

               10        20        30        40        50        60
pF1KB6 MEQWDHFHNQQEDTDSCSESVKFDARSMTALLPPNPKNSPSLQEKLKSFKAALIALYLLV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MEQWDHFHNQQEDTDSCSESVKFDARSMTALLPPNPKNSPSLQEKLKSFKAALIALYLLV
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 FAVLIPLIGIVAAQLLKWETKNCSVSSTNANDITQSLTGKGNDSEEEMRFQEVFMEHMSN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 FAVLIPLIGIVAAQLLKWETKNCSVSSTNANDITQSLTGKGNDSEEEMRFQEVFMEHMSN
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 MEKRIQHILDMEANLMDTEHFQNFSMTTDQRFNDILLQLSTLFSSVQGHGNAIDEISKSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 MEKRIQHILDMEANLMDTEHFQNFSMTTDQRFNDILLQLSTLFSSVQGHGNAIDEISKSL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 ISLNTTLLDLQLNIENLNGKIQENTFKQQEEISKLEERVYNVSAEIMAMKEEQVHLEQEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 ISLNTTLLDLQLNIENLNGKIQENTFKQQEEISKLEERVYNVSAEIMAMKEEQVHLEQEI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 KGEVKVLNNITNDLRLKDWEHSQTLRNITLIQGPPGPPGEKGDRGPTGESGPRGFPGPIG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_002 KGEVKVLNNITNDLRLKDWEHSQTLRNITLIQGPPGPPGEKGDRGPTGESGPRGFPGPIG
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 PPGLKGDRGAIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGGSGPHE
       :::::::::::::::::::::::::::::::::::::::::::: :              
NP_002 PPGLKGDRGAIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLRPVQLTDHIRAGPS  
              310       320       330       340       350          

              370       380       390       400       410       420
pF1KB6 GRVEILHSGQWGTICDDRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCF

>>NP_776194 (OMIM: 611306) scavenger receptor class A me  (495 aa)
 initn: 790 init1: 451 opt: 643  Z-score: 445.7  bits: 91.8 E(85289): 4.4e-18
Smith-Waterman score: 910; 35.5% identity (63.9% similar) in 482 aa overlap (13-449:15-492)

                 10         20        30            40             
pF1KB6   MEQWDHFHNQQEDTDS-CSESVKFDARSMTALL----PPNPKNSPSL----QEKLKSF
                     ::.: : .:  ::.::.. :      :  :   :.      .:...
NP_776 MENKAMYLHTVSDCDTSSICEDS--FDGRSLSKLNLCEDGPCHKRRASICCTQLGSLSAL
               10        20          30        40        50        

      50        60        70              80        90          100
pF1KB6 KAALIALYLLVFAVLIPLIGIVAAQL------LKWETKNCSVSSTNANDITQSLTG---K
       : :...:::::: .:. .. .....       ::  :.: .  . .  :.   :     .
NP_776 KHAVLGLYLLVFLILVGIFILAVSRPRSSPDDLKALTRNVNRLNESFRDLQLRLLQAPLQ
       60        70        80        90       100       110        

              110             120        130       140       150   
pF1KB6 GNDSEEEMRFQEVFMEH------MSNMEKRIQHIL-DMEANLMDTEHFQNFSMTTDQ--R
       .. .:.  . :......      ...  .:..  :  ..:. ..::  :  ..  :.  .
NP_776 ADLTEQVWKVQDALQNQSDSLLALAGAVQRLEGALWGLQAQAVQTE--QAVALLRDRTGQ
      120       130       140       150       160         170      

                 160           170       180       190       200   
pF1KB6 FNDI----LLQLSTLFSSVQ----GHGNAIDEISKSLISLNTTLLDLQLNIENLNGKIQE
        .:     : ::..  .: :     :.. .: ... .  :.  : :.   ...:: ... 
NP_776 QSDTAQLELYQLQVESNSSQLLLRRHAGLLDGLARRVGILGEELADVGGVLRGLNHSLSY
        180       190       200       210       220       230      

           210       220       230       240       250       260   
pF1KB6 NTFKQQEEISKLEERVYNVSAEIMAMKEEQVHLEQEIKGEVKVLNNITNDLRLKDWEHSQ
       ..  .. ... :.  : :.: .   ..  .: .: ..: :. .:: .:.:::::::::: 
NP_776 DVALHRTRLQDLRVLVSNASEDTRRLRLAHVGMELQLKQELAMLNAVTEDLRLKDWEHSI
        240       250       260       270       280       290      

           270       280       290             300       310       
pF1KB6 TLRNITLIQGPPGPPGEKGDRGPTGESG-P-----RGFPGPIGPPGLKGDRGAIGFPGSR
       .::::.: .::::: :..::.:  :. : :     ::.::  : ::: : .:  :  :. 
NP_776 ALRNISLAKGPPGPKGDQGDEGKEGRPGIPGLPGLRGLPGERGTPGLPGPKGDDGKLGAT
        300       310       320       330       340       350      

       320       330         340         350       360       370   
pF1KB6 GLPGYAGRPGNSGPKGQKGEKG--SGNT--LTPFTKVRLVGGSGPHEGRVEILHSGQWGT
       :  :. :  :. ::::.:::::  .:..  .     .:::.::::::::::. :. .:::
NP_776 GPMGMRGFKGDRGPKGEKGEKGDRAGDASGVEAPMMIRLVNGSGPHEGRVEVYHDRRWGT
        360       370       380       390       400       410      

           380       390       400       410       420       430   
pF1KB6 ICDDRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCFGRESSIEECKIRQ
       .::: :. . :.:::: ::. ::. :...:.:::::: ::...: : : : .: .:.. .
NP_776 VCDDGWDKKDGDVVCRMLGFRGVEEVYRTARFGQGTGRIWMDDVACKGTEETIFRCSFSK
        420       430       440       450       460       470      

           440       450  
pF1KB6 WGTRACSHSEDAGVTCTL 
       ::.  :.:.:::.:::   
NP_776 WGVTNCGHAEDASVTCNRH
        480       490     

>>XP_005263375 (OMIM: 249500,606709) PREDICTED: neurotry  (555 aa)
 initn: 438 init1: 438 opt: 438  Z-score: 309.1  bits: 66.7 E(85289): 1.8e-10
Smith-Waterman score: 438; 52.9% identity (77.9% similar) in 104 aa overlap (347-450:277-380)

        320       330       340       350       360       370      
pF1KB6 RGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGGSGPHEGRVEILHSGQWGTICD
                                     :  .::.:::. ::::::. :.:::::.::
XP_005 LLCEKDIWQGGVCPQKMAAAVTCSFSHGPTFPIIRLAGGSSVHEGRVELYHAGQWGTVCD
        250       260       270       280       290       300      

        380       390       400       410       420       430      
pF1KB6 DRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCFGRESSIEECKIRQWGT
       :.:.   ..:.::.::  :.  . . :.::.:.::. :.:: : : : :::.:   .:: 
XP_005 DQWDDADAEVICRQLGLSGIAKAWHQAYFGEGSGPVMLDEVRCTGNELSIEQCPKSSWGE
        310       320       330       340       350       360      

        440       450                                              
pF1KB6 RACSHSEDAGVTCTL                                             
       . :.:.:::::.::                                              
XP_005 HNCGHKEDAGVSCTPLTDGVIRLAGGKGSHEGRLEVYYRGQWGTVCDDGWTELNTYVVCR
        370       380       390       400       410       420      

>--
 initn: 384 init1: 199 opt: 397  Z-score: 281.8  bits: 61.7 E(85289): 5.8e-09
Smith-Waterman score: 397; 50.5% identity (73.8% similar) in 107 aa overlap (346-449:381-485)

         320       330       340         350       360       370   
pF1KB6 SRGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTK--VRLVGGSGPHEGRVEILHSGQWGT
                                     :.:   .::.::.: ::::.:. . :::::
XP_005 GNELSIEQCPKSSWGEHNCGHKEDAGVSCTPLTDGVIRLAGGKGSHEGRLEVYYRGQWGT
              360       370       380       390       400       410

           380       390        400       410       420       430  
pF1KB6 ICDDRWEVRVGQVVCRSLGYP-GVQAVHKAAHFGQGTGPIWLNEVFCFGRESSIEECKIR
       .::: :      ::::.::.  : ::  .: :: ..::::::..: : :.:. . .:. :
XP_005 VCDDGWTELNTYVVCRQLGFKYGKQA--SANHFEESTGPIWLDDVSCSGKETRFLQCSRR
              420       430         440       450       460        

            440       450                                          
pF1KB6 QWGTRACSHSEDAGVTCTL                                         
       ::: . ::: ::....:                                           
XP_005 QWGRHDCSHREDVSIACYPGGEGHRLSLGFPVRLMDGENKKEGRVEVFINGQWGTICDDG
      470       480       490       500       510       520        

>>XP_011530689 (OMIM: 249500,606709) PREDICTED: neurotry  (573 aa)
 initn: 438 init1: 438 opt: 438  Z-score: 308.9  bits: 66.7 E(85289): 1.8e-10
Smith-Waterman score: 438; 52.9% identity (77.9% similar) in 104 aa overlap (347-450:277-380)

        320       330       340       350       360       370      
pF1KB6 RGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGGSGPHEGRVEILHSGQWGTICD
                                     :  .::.:::. ::::::. :.:::::.::
XP_011 LLCEKDIWQGGVCPQKMAAAVTCSFSHGPTFPIIRLAGGSSVHEGRVELYHAGQWGTVCD
        250       260       270       280       290       300      

        380       390       400       410       420       430      
pF1KB6 DRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCFGRESSIEECKIRQWGT
       :.:.   ..:.::.::  :.  . . :.::.:.::. :.:: : : : :::.:   .:: 
XP_011 DQWDDADAEVICRQLGLSGIAKAWHQAYFGEGSGPVMLDEVRCTGNELSIEQCPKSSWGE
        310       320       330       340       350       360      

        440       450                                              
pF1KB6 RACSHSEDAGVTCTL                                             
       . :.:.:::::.::                                              
XP_011 HNCGHKEDAGVSCTPLTDGVIRLAGGKGSHEGRLEVYYRGQWGTVCDDGWTELNTYVVCR
        370       380       390       400       410       420      

>>NP_003610 (OMIM: 249500,606709) neurotrypsin precursor  (875 aa)
 initn: 727 init1: 438 opt: 438  Z-score: 306.9  bits: 67.0 E(85289): 2.3e-10
Smith-Waterman score: 438; 52.9% identity (77.9% similar) in 104 aa overlap (347-450:277-380)

        320       330       340       350       360       370      
pF1KB6 RGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGGSGPHEGRVEILHSGQWGTICD
                                     :  .::.:::. ::::::. :.:::::.::
NP_003 LLCEKDIWQGGVCPQKMAAAVTCSFSHGPTFPIIRLAGGSSVHEGRVELYHAGQWGTVCD
        250       260       270       280       290       300      

        380       390       400       410       420       430      
pF1KB6 DRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCFGRESSIEECKIRQWGT
       :.:.   ..:.::.::  :.  . . :.::.:.::. :.:: : : : :::.:   .:: 
NP_003 DQWDDADAEVICRQLGLSGIAKAWHQAYFGEGSGPVMLDEVRCTGNELSIEQCPKSSWGE
        310       320       330       340       350       360      

        440       450                                              
pF1KB6 RACSHSEDAGVTCTL                                             
       . :.:.:::::.::                                              
NP_003 HNCGHKEDAGVSCTPLTDGVIRLAGGKGSHEGRLEVYYRGQWGTVCDDGWTELNTYVVCR
        370       380       390       400       410       420      

>--
 initn: 727 init1: 357 opt: 368  Z-score: 260.5  bits: 58.4 E(85289): 9.1e-08
Smith-Waterman score: 397; 50.5% identity (73.8% similar) in 107 aa overlap (346-449:381-485)

         320       330       340         350       360       370   
pF1KB6 SRGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTK--VRLVGGSGPHEGRVEILHSGQWGT
                                     :.:   .::.::.: ::::.:. . :::::
NP_003 GNELSIEQCPKSSWGEHNCGHKEDAGVSCTPLTDGVIRLAGGKGSHEGRLEVYYRGQWGT
              360       370       380       390       400       410

           380       390        400       410       420       430  
pF1KB6 ICDDRWEVRVGQVVCRSLGYP-GVQAVHKAAHFGQGTGPIWLNEVFCFGRESSIEECKIR
       .::: :      ::::.::.  : ::  .: :: ..::::::..: : :.:. . .:. :
NP_003 VCDDGWTELNTYVVCRQLGFKYGKQA--SANHFEESTGPIWLDDVSCSGKETRFLQCSRR
              420       430         440       450       460        

            440       450                                          
pF1KB6 QWGTRACSHSEDAGVTCTL                                         
       ::: . ::: ::....:                                           
NP_003 QWGRHDCSHREDVSIACYPGGEGHRLSLGFPVRLMDGENKKEGRVEVFINGQWGTICDDG
      470       480       490       500       510       520        

>--
 initn: 418 init1: 357 opt: 368  Z-score: 260.5  bits: 58.4 E(85289): 9.1e-08
Smith-Waterman score: 368; 46.8% identity (68.5% similar) in 111 aa overlap (339-449:489-599)

      310       320       330       340       350       360        
pF1KB6 GAIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGGSGPHEGRVEILHS
                                     : :. :.    :::. : . .:::::.. .
NP_003 ETRFLQCSRRQWGRHDCSHREDVSIACYPGGEGHRLSLGFPVRLMDGENKKEGRVEVFIN
      460       470       480       490       500       510        

      370       380       390       400       410       420        
pF1KB6 GQWGTICDDRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCFGRESSIEE
       ::::::::: :  . . :.::.::: :   ..  :.::.: ::: ...: : : : :. .
NP_003 GQWGTICDDGWTDKDAAVICRQLGYKGPARARTMAYFGEGKGPIHVDNVKCTGNERSLAD
      520       530       540       550       560       570        

      430       440       450                                      
pF1KB6 CKIRQWGTRACSHSEDAGVTCTL                                     
       :  .. : . : ::::::: :                                       
NP_003 CIKQDIGRHNCRHSEDAGVICDYFGKKASGNSNKESLSSVCGLRLLHRRQKRIIGGKNSL
      580       590       600       610       620       630        

>>NP_115587 (OMIM: 607318) lysyl oxidase homolog 4 precu  (756 aa)
 initn: 675 init1: 374 opt: 410  Z-score: 289.0  bits: 63.4 E(85289): 2.3e-09
Smith-Waterman score: 410; 52.4% identity (78.6% similar) in 103 aa overlap (348-449:30-132)

       320       330       340       350        360       370      
pF1KB6 GLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGG-SGPHEGRVEILHSGQWGTICD
                                     ::.::::  : :.:::.:.::.:::::.::
NP_115  MAWSPPATLFLFLLLLGQPPPSRPQSLGTTKLRLVGPESKPEEGRLEVLHQGQWGTVCD
                10        20        30        40        50         

        380       390       400       410       420       430      
pF1KB6 DRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCFGRESSIEECKIRQWGT
       : . .. . :.::.::. .. .  ..:..::: :::::..: : : :::...:    ::.
NP_115 DNFAIQEATVACRQLGFEAALTWAHSAKYGQGEGPIWLDNVRCVGTESSLDQCGSNGWGV
      60        70        80        90       100       110         

        440       450                                              
pF1KB6 RACSHSEDAGVTCTL                                             
         ::::::.:: :                                               
NP_115 SDCSHSEDVGVICHPRRHRGYLSETVSNALGPQGRRLEEVRLKPILASAKQHSPVTEGAV
     120       130       140       150       160       170         

>--
 initn: 453 init1: 315 opt: 330  Z-score: 235.9  bits: 53.6 E(85289): 2.1e-06
Smith-Waterman score: 330; 41.1% identity (66.7% similar) in 129 aa overlap (323-451:288-412)

            300       310       320       330       340       350  
pF1KB6 RGFPGPIGPPGLKGDRGAIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRL
                                     :: :    :: .  .:::     :  .:::
NP_115 MANCQVQVAPARGKLRPACPGGMHAVVSCVAG-PHFRPPKTKPQRKGSWAE-EP--RVRL
       260       270       280        290       300          310   

            360       370       380       390       400       410  
pF1KB6 VGGSGPHEGRVEILHSGQWGTICDDRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPI
        .:.   :::::.: . ::::.:: ::..  ..::::.::. ... .  .:..::: :::
NP_115 RSGAQVGEGRVEVLMNRQWGTVCDHRWNLISASVVCRQLGFGSAREALFGARLGQGLGPI
           320       330       340       350       360       370   

            420       430       440       450                      
pF1KB6 WLNEVFCFGRESSIEECKIRQWGTRACSHSEDAGVTCTL                     
        :.:: : : : .. .:   . .  .:.: .::.: :..                     
NP_115 HLSEVRCRGYERTLSDCPALEGSQNGCQHENDAAVRCNVPNMGFQNQVRLAGGRIPEEGL
           380       390       400       410       420       430   

NP_115 LEVQVEVNGVPRWGSVCSENWGLTEAMVACRQLGLGFAIHAYKETWFWSGTPRAQEVVMS
           440       450       460       470       480       490   

>>XP_006718083 (OMIM: 607318) PREDICTED: lysyl oxidase h  (757 aa)
 initn: 675 init1: 374 opt: 410  Z-score: 289.0  bits: 63.4 E(85289): 2.3e-09
Smith-Waterman score: 410; 52.4% identity (78.6% similar) in 103 aa overlap (348-449:30-132)

       320       330       340       350        360       370      
pF1KB6 GLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGG-SGPHEGRVEILHSGQWGTICD
                                     ::.::::  : :.:::.:.::.:::::.::
XP_006  MAWSPPATLFLFLLLLGQPPPSRPQSLGTTKLRLVGPESKPEEGRLEVLHQGQWGTVCD
                10        20        30        40        50         

        380       390       400       410       420       430      
pF1KB6 DRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCFGRESSIEECKIRQWGT
       : . .. . :.::.::. .. .  ..:..::: :::::..: : : :::...:    ::.
XP_006 DNFAIQEATVACRQLGFEAALTWAHSAKYGQGEGPIWLDNVRCVGTESSLDQCGSNGWGV
      60        70        80        90       100       110         

        440       450                                              
pF1KB6 RACSHSEDAGVTCTL                                             
         ::::::.:: :                                               
XP_006 SDCSHSEDVGVICHPRRHRGYLSETVSNALGPQGRRLEEVRLKPILASAKQHSPVTEGAV
     120       130       140       150       160       170         

>--
 initn: 453 init1: 315 opt: 340  Z-score: 242.5  bits: 54.8 E(85289): 9e-07
Smith-Waterman score: 340; 41.1% identity (66.7% similar) in 129 aa overlap (323-451:288-413)

            300       310       320       330       340       350  
pF1KB6 RGFPGPIGPPGLKGDRGAIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRL
                                     :: :    :: .  .:::     :  .:::
XP_006 MANCQVQVAPARGKLRPACPGGMHAVVSCVAG-PHFRPPKTKPQRKGSWAEQEP--RVRL
       260       270       280        290       300       310      

            360       370       380       390       400       410  
pF1KB6 VGGSGPHEGRVEILHSGQWGTICDDRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPI
        .:.   :::::.: . ::::.:: ::..  ..::::.::. ... .  .:..::: :::
XP_006 RSGAQVGEGRVEVLMNRQWGTVCDHRWNLISASVVCRQLGFGSAREALFGARLGQGLGPI
          320       330       340       350       360       370    

            420       430       440       450                      
pF1KB6 WLNEVFCFGRESSIEECKIRQWGTRACSHSEDAGVTCTL                     
        :.:: : : : .. .:   . .  .:.: .::.: :..                     
XP_006 HLSEVRCRGYERTLSDCPALEGSQNGCQHENDAAVRCNVPNMGFQNQVRLAGGRIPEEGL
          380       390       400       410       420       430    

XP_006 LEVQVEVNGVPRWGSVCSENWGLTEAMVACRQLGLGFAIHAYKETWFWSGTPRAQEVVMS
          440       450       460       470       480       490    

>>XP_005270273 (OMIM: 607318) PREDICTED: lysyl oxidase h  (757 aa)
 initn: 675 init1: 374 opt: 410  Z-score: 289.0  bits: 63.4 E(85289): 2.3e-09
Smith-Waterman score: 410; 52.4% identity (78.6% similar) in 103 aa overlap (348-449:30-132)

       320       330       340       350        360       370      
pF1KB6 GLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGG-SGPHEGRVEILHSGQWGTICD
                                     ::.::::  : :.:::.:.::.:::::.::
XP_005  MAWSPPATLFLFLLLLGQPPPSRPQSLGTTKLRLVGPESKPEEGRLEVLHQGQWGTVCD
                10        20        30        40        50         

        380       390       400       410       420       430      
pF1KB6 DRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCFGRESSIEECKIRQWGT
       : . .. . :.::.::. .. .  ..:..::: :::::..: : : :::...:    ::.
XP_005 DNFAIQEATVACRQLGFEAALTWAHSAKYGQGEGPIWLDNVRCVGTESSLDQCGSNGWGV
      60        70        80        90       100       110         

        440       450                                              
pF1KB6 RACSHSEDAGVTCTL                                             
         ::::::.:: :                                               
XP_005 SDCSHSEDVGVICHPRRHRGYLSETVSNALGPQGRRLEEVRLKPILASAKQHSPVTEGAV
     120       130       140       150       160       170         

>--
 initn: 453 init1: 315 opt: 340  Z-score: 242.5  bits: 54.8 E(85289): 9e-07
Smith-Waterman score: 340; 41.1% identity (66.7% similar) in 129 aa overlap (323-451:288-413)

            300       310       320       330       340       350  
pF1KB6 RGFPGPIGPPGLKGDRGAIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRL
                                     :: :    :: .  .:::     :  .:::
XP_005 MANCQVQVAPARGKLRPACPGGMHAVVSCVAG-PHFRPPKTKPQRKGSWAEQEP--RVRL
       260       270       280        290       300       310      

            360       370       380       390       400       410  
pF1KB6 VGGSGPHEGRVEILHSGQWGTICDDRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPI
        .:.   :::::.: . ::::.:: ::..  ..::::.::. ... .  .:..::: :::
XP_005 RSGAQVGEGRVEVLMNRQWGTVCDHRWNLISASVVCRQLGFGSAREALFGARLGQGLGPI
          320       330       340       350       360       370    

            420       430       440       450                      
pF1KB6 WLNEVFCFGRESSIEECKIRQWGTRACSHSEDAGVTCTL                     
        :.:: : : : .. .:   . .  .:.: .::.: :..                     
XP_005 HLSEVRCRGYERTLSDCPALEGSQNGCQHENDAAVRCNVPNMGFQNQVRLAGGRIPEEGL
          380       390       400       410       420       430    

XP_005 LEVQVEVNGVPRWGSVCSENWGLTEAMVACRQLGLGFAIHAYKETWFWSGTPRAQEVVMS
          440       450       460       470       480       490    




451 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 01:32:24 2016 done: Tue Nov  8 01:32:25 2016
 Total Scan time: 10.540 Total Display time:  0.050

Function used was FASTA [36.3.4 Apr, 2011]
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