FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB6662, 451 aa 1>>>pF1KB6662 451 - 451 aa - 451 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.0370+/-0.000397; mu= 13.9058+/- 0.025 mean_var=226.8888+/-47.100, 0's: 0 Z-trim(120.0): 454 B-trim: 1836 in 1/53 Lambda= 0.085147 statistics sampled from 34142 (34621) to 34142 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.74), E-opt: 0.2 (0.406), width: 16 Scan time: 10.540 The best scores are: opt bits E(85289) NP_619729 (OMIM: 153622,176807,614266) macrophage ( 451) 3054 387.9 2.9e-107 NP_619730 (OMIM: 153622,176807,614266) macrophage ( 388) 2291 294.1 4.3e-79 NP_002436 (OMIM: 153622,176807,614266) macrophage ( 358) 2287 293.6 5.8e-79 NP_776194 (OMIM: 611306) scavenger receptor class ( 495) 643 91.8 4.4e-18 XP_005263375 (OMIM: 249500,606709) PREDICTED: neur ( 555) 438 66.7 1.8e-10 XP_011530689 (OMIM: 249500,606709) PREDICTED: neur ( 573) 438 66.7 1.8e-10 NP_003610 (OMIM: 249500,606709) neurotrypsin precu ( 875) 438 67.0 2.3e-10 NP_115587 (OMIM: 607318) lysyl oxidase homolog 4 p ( 756) 410 63.4 2.3e-09 XP_006718083 (OMIM: 607318) PREDICTED: lysyl oxida ( 757) 410 63.4 2.3e-09 XP_005270273 (OMIM: 607318) PREDICTED: lysyl oxida ( 757) 410 63.4 2.3e-09 NP_981961 (OMIM: 605545) scavenger receptor cystei (1121) 408 63.4 3.5e-09 XP_005253586 (OMIM: 605545) PREDICTED: scavenger r (1124) 408 63.4 3.5e-09 NP_004235 (OMIM: 605545) scavenger receptor cystei (1156) 408 63.4 3.6e-09 XP_016875720 (OMIM: 605545) PREDICTED: scavenger r (1161) 408 63.4 3.6e-09 XP_011518923 (OMIM: 606079) PREDICTED: scavenger r ( 766) 402 62.5 4.6e-09 XP_011518922 (OMIM: 606079) PREDICTED: scavenger r (1182) 402 62.7 6e-09 XP_011518921 (OMIM: 606079) PREDICTED: scavenger r (1182) 402 62.7 6e-09 XP_011518920 (OMIM: 606079) PREDICTED: scavenger r (1214) 402 62.7 6.1e-09 XP_011518918 (OMIM: 606079) PREDICTED: scavenger r (1421) 402 62.8 6.7e-09 XP_011518919 (OMIM: 606079) PREDICTED: scavenger r (1428) 402 62.8 6.7e-09 NP_777601 (OMIM: 606079) scavenger receptor cystei (1453) 402 62.8 6.8e-09 NP_001284579 (OMIM: 606079) scavenger receptor cys (1463) 402 62.8 6.8e-09 NP_542782 (OMIM: 607639) scavenger receptor cystei ( 575) 373 58.7 4.6e-08 NP_115992 (OMIM: 607163) lysyl oxidase homolog 3 i ( 753) 371 58.6 6.4e-08 XP_011531436 (OMIM: 607163) PREDICTED: lysyl oxida ( 753) 371 58.6 6.4e-08 NP_005558 (OMIM: 600626) galectin-3-binding protei ( 585) 368 58.1 7.1e-08 XP_016867239 (OMIM: 607639) PREDICTED: scavenger r ( 406) 355 56.3 1.7e-07 NP_002309 (OMIM: 606663) lysyl oxidase homolog 2 p ( 774) 359 57.2 1.8e-07 NP_001276093 (OMIM: 607163) lysyl oxidase homolog ( 608) 353 56.3 2.6e-07 XP_011537717 (OMIM: 601969) PREDICTED: deleted in (1766) 356 57.3 3.8e-07 XP_011537716 (OMIM: 601969) PREDICTED: deleted in (1783) 356 57.3 3.9e-07 NP_004397 (OMIM: 601969) deleted in malignant brai (1785) 356 57.3 3.9e-07 XP_011537715 (OMIM: 601969) PREDICTED: deleted in (2282) 355 57.3 4.9e-07 XP_016871287 (OMIM: 601969) PREDICTED: deleted in (1990) 354 57.1 4.9e-07 NP_060049 (OMIM: 601969) deleted in malignant brai (2403) 355 57.4 5e-07 XP_011537713 (OMIM: 601969) PREDICTED: deleted in (2403) 355 57.4 5e-07 XP_011537711 (OMIM: 601969) PREDICTED: deleted in (2411) 355 57.4 5e-07 XP_011537710 (OMIM: 601969) PREDICTED: deleted in (2411) 355 57.4 5e-07 XP_011537712 (OMIM: 601969) PREDICTED: deleted in (2411) 355 57.4 5e-07 XP_011537709 (OMIM: 601969) PREDICTED: deleted in (2411) 355 57.4 5e-07 NP_001307573 (OMIM: 601969) deleted in malignant b (2412) 355 57.4 5e-07 XP_011537705 (OMIM: 601969) PREDICTED: deleted in (2413) 355 57.4 5e-07 XP_011537703 (OMIM: 601969) PREDICTED: deleted in (2413) 355 57.4 5e-07 XP_011537704 (OMIM: 601969) PREDICTED: deleted in (2413) 355 57.4 5e-07 NP_015568 (OMIM: 601969) deleted in malignant brai (2413) 355 57.4 5e-07 XP_011537707 (OMIM: 601969) PREDICTED: deleted in (2413) 355 57.4 5e-07 XP_011537702 (OMIM: 601969) PREDICTED: deleted in (2434) 355 57.4 5.1e-07 XP_006717728 (OMIM: 601969) PREDICTED: deleted in (2510) 355 57.4 5.2e-07 XP_011537701 (OMIM: 601969) PREDICTED: deleted in (2510) 355 57.4 5.2e-07 XP_011537700 (OMIM: 601969) PREDICTED: deleted in (2521) 355 57.4 5.2e-07 >>NP_619729 (OMIM: 153622,176807,614266) macrophage scav (451 aa) initn: 3054 init1: 3054 opt: 3054 Z-score: 2046.8 bits: 387.9 E(85289): 2.9e-107 Smith-Waterman score: 3054; 100.0% identity (100.0% similar) in 451 aa overlap (1-451:1-451) 10 20 30 40 50 60 pF1KB6 MEQWDHFHNQQEDTDSCSESVKFDARSMTALLPPNPKNSPSLQEKLKSFKAALIALYLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 MEQWDHFHNQQEDTDSCSESVKFDARSMTALLPPNPKNSPSLQEKLKSFKAALIALYLLV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 FAVLIPLIGIVAAQLLKWETKNCSVSSTNANDITQSLTGKGNDSEEEMRFQEVFMEHMSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 FAVLIPLIGIVAAQLLKWETKNCSVSSTNANDITQSLTGKGNDSEEEMRFQEVFMEHMSN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 MEKRIQHILDMEANLMDTEHFQNFSMTTDQRFNDILLQLSTLFSSVQGHGNAIDEISKSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 MEKRIQHILDMEANLMDTEHFQNFSMTTDQRFNDILLQLSTLFSSVQGHGNAIDEISKSL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB6 ISLNTTLLDLQLNIENLNGKIQENTFKQQEEISKLEERVYNVSAEIMAMKEEQVHLEQEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 ISLNTTLLDLQLNIENLNGKIQENTFKQQEEISKLEERVYNVSAEIMAMKEEQVHLEQEI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB6 KGEVKVLNNITNDLRLKDWEHSQTLRNITLIQGPPGPPGEKGDRGPTGESGPRGFPGPIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 KGEVKVLNNITNDLRLKDWEHSQTLRNITLIQGPPGPPGEKGDRGPTGESGPRGFPGPIG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB6 PPGLKGDRGAIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGGSGPHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 PPGLKGDRGAIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGGSGPHE 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB6 GRVEILHSGQWGTICDDRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 GRVEILHSGQWGTICDDRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCF 370 380 390 400 410 420 430 440 450 pF1KB6 GRESSIEECKIRQWGTRACSHSEDAGVTCTL ::::::::::::::::::::::::::::::: NP_619 GRESSIEECKIRQWGTRACSHSEDAGVTCTL 430 440 450 >>NP_619730 (OMIM: 153622,176807,614266) macrophage scav (388 aa) initn: 2281 init1: 2281 opt: 2291 Z-score: 1540.9 bits: 294.1 E(85289): 4.3e-79 Smith-Waterman score: 2458; 85.8% identity (86.0% similar) in 451 aa overlap (1-451:1-388) 10 20 30 40 50 60 pF1KB6 MEQWDHFHNQQEDTDSCSESVKFDARSMTALLPPNPKNSPSLQEKLKSFKAALIALYLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 MEQWDHFHNQQEDTDSCSESVKFDARSMTALLPPNPKNSPSLQEKLKSFKAALIALYLLV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 FAVLIPLIGIVAAQLLKWETKNCSVSSTNANDITQSLTGKGNDSEEEMRFQEVFMEHMSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 FAVLIPLIGIVAAQLLKWETKNCSVSSTNANDITQSLTGKGNDSEEEMRFQEVFMEHMSN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 MEKRIQHILDMEANLMDTEHFQNFSMTTDQRFNDILLQLSTLFSSVQGHGNAIDEISKSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 MEKRIQHILDMEANLMDTEHFQNFSMTTDQRFNDILLQLSTLFSSVQGHGNAIDEISKSL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB6 ISLNTTLLDLQLNIENLNGKIQENTFKQQEEISKLEERVYNVSAEIMAMKEEQVHLEQEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 ISLNTTLLDLQLNIENLNGKIQENTFKQQEEISKLEERVYNVSAEIMAMKEEQVHLEQEI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB6 KGEVKVLNNITNDLRLKDWEHSQTLRNITLIQGPPGPPGEKGDRGPTGESGPRGFPGPIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_619 KGEVKVLNNITNDLRLKDWEHSQTLRNITLIQGPPGPPGEKGDRGPTGESGPRGFPGPIG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB6 PPGLKGDRGAIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGGSGPHE ::::::::::::::::::::::::::::::::::::::::::::. NP_619 PPGLKGDRGAIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLS--------------- 310 320 330 340 370 380 390 400 410 420 pF1KB6 GRVEILHSGQWGTICDDRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCF :::::::::::: NP_619 ------------------------------------------------TGPIWLNEVFCF 350 430 440 450 pF1KB6 GRESSIEECKIRQWGTRACSHSEDAGVTCTL ::::::::::::::::::::::::::::::: NP_619 GRESSIEECKIRQWGTRACSHSEDAGVTCTL 360 370 380 >>NP_002436 (OMIM: 153622,176807,614266) macrophage scav (358 aa) initn: 2447 init1: 2287 opt: 2287 Z-score: 1538.6 bits: 293.6 E(85289): 5.8e-79 Smith-Waterman score: 2287; 99.7% identity (99.7% similar) in 346 aa overlap (1-346:1-346) 10 20 30 40 50 60 pF1KB6 MEQWDHFHNQQEDTDSCSESVKFDARSMTALLPPNPKNSPSLQEKLKSFKAALIALYLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 MEQWDHFHNQQEDTDSCSESVKFDARSMTALLPPNPKNSPSLQEKLKSFKAALIALYLLV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 FAVLIPLIGIVAAQLLKWETKNCSVSSTNANDITQSLTGKGNDSEEEMRFQEVFMEHMSN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 FAVLIPLIGIVAAQLLKWETKNCSVSSTNANDITQSLTGKGNDSEEEMRFQEVFMEHMSN 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 MEKRIQHILDMEANLMDTEHFQNFSMTTDQRFNDILLQLSTLFSSVQGHGNAIDEISKSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 MEKRIQHILDMEANLMDTEHFQNFSMTTDQRFNDILLQLSTLFSSVQGHGNAIDEISKSL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB6 ISLNTTLLDLQLNIENLNGKIQENTFKQQEEISKLEERVYNVSAEIMAMKEEQVHLEQEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 ISLNTTLLDLQLNIENLNGKIQENTFKQQEEISKLEERVYNVSAEIMAMKEEQVHLEQEI 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB6 KGEVKVLNNITNDLRLKDWEHSQTLRNITLIQGPPGPPGEKGDRGPTGESGPRGFPGPIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 KGEVKVLNNITNDLRLKDWEHSQTLRNITLIQGPPGPPGEKGDRGPTGESGPRGFPGPIG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB6 PPGLKGDRGAIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGGSGPHE :::::::::::::::::::::::::::::::::::::::::::: : NP_002 PPGLKGDRGAIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLRPVQLTDHIRAGPS 310 320 330 340 350 370 380 390 400 410 420 pF1KB6 GRVEILHSGQWGTICDDRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCF >>NP_776194 (OMIM: 611306) scavenger receptor class A me (495 aa) initn: 790 init1: 451 opt: 643 Z-score: 445.7 bits: 91.8 E(85289): 4.4e-18 Smith-Waterman score: 910; 35.5% identity (63.9% similar) in 482 aa overlap (13-449:15-492) 10 20 30 40 pF1KB6 MEQWDHFHNQQEDTDS-CSESVKFDARSMTALL----PPNPKNSPSL----QEKLKSF ::.: : .: ::.::.. : : : :. .:... NP_776 MENKAMYLHTVSDCDTSSICEDS--FDGRSLSKLNLCEDGPCHKRRASICCTQLGSLSAL 10 20 30 40 50 50 60 70 80 90 100 pF1KB6 KAALIALYLLVFAVLIPLIGIVAAQL------LKWETKNCSVSSTNANDITQSLTG---K : :...:::::: .:. .. ..... :: :.: . . . :. : . NP_776 KHAVLGLYLLVFLILVGIFILAVSRPRSSPDDLKALTRNVNRLNESFRDLQLRLLQAPLQ 60 70 80 90 100 110 110 120 130 140 150 pF1KB6 GNDSEEEMRFQEVFMEH------MSNMEKRIQHIL-DMEANLMDTEHFQNFSMTTDQ--R .. .:. . :...... ... .:.. : ..:. ..:: : .. :. . NP_776 ADLTEQVWKVQDALQNQSDSLLALAGAVQRLEGALWGLQAQAVQTE--QAVALLRDRTGQ 120 130 140 150 160 170 160 170 180 190 200 pF1KB6 FNDI----LLQLSTLFSSVQ----GHGNAIDEISKSLISLNTTLLDLQLNIENLNGKIQE .: : ::.. .: : :.. .: ... . :. : :. ...:: ... NP_776 QSDTAQLELYQLQVESNSSQLLLRRHAGLLDGLARRVGILGEELADVGGVLRGLNHSLSY 180 190 200 210 220 230 210 220 230 240 250 260 pF1KB6 NTFKQQEEISKLEERVYNVSAEIMAMKEEQVHLEQEIKGEVKVLNNITNDLRLKDWEHSQ .. .. ... :. : :.: . .. .: .: ..: :. .:: .:.:::::::::: NP_776 DVALHRTRLQDLRVLVSNASEDTRRLRLAHVGMELQLKQELAMLNAVTEDLRLKDWEHSI 240 250 260 270 280 290 270 280 290 300 310 pF1KB6 TLRNITLIQGPPGPPGEKGDRGPTGESG-P-----RGFPGPIGPPGLKGDRGAIGFPGSR .::::.: .::::: :..::.: :. : : ::.:: : ::: : .: : :. NP_776 ALRNISLAKGPPGPKGDQGDEGKEGRPGIPGLPGLRGLPGERGTPGLPGPKGDDGKLGAT 300 310 320 330 340 350 320 330 340 350 360 370 pF1KB6 GLPGYAGRPGNSGPKGQKGEKG--SGNT--LTPFTKVRLVGGSGPHEGRVEILHSGQWGT : :. : :. ::::.::::: .:.. . .:::.::::::::::. :. .::: NP_776 GPMGMRGFKGDRGPKGEKGEKGDRAGDASGVEAPMMIRLVNGSGPHEGRVEVYHDRRWGT 360 370 380 390 400 410 380 390 400 410 420 430 pF1KB6 ICDDRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCFGRESSIEECKIRQ .::: :. . :.:::: ::. ::. :...:.:::::: ::...: : : : .: .:.. . NP_776 VCDDGWDKKDGDVVCRMLGFRGVEEVYRTARFGQGTGRIWMDDVACKGTEETIFRCSFSK 420 430 440 450 460 470 440 450 pF1KB6 WGTRACSHSEDAGVTCTL ::. :.:.:::.::: NP_776 WGVTNCGHAEDASVTCNRH 480 490 >>XP_005263375 (OMIM: 249500,606709) PREDICTED: neurotry (555 aa) initn: 438 init1: 438 opt: 438 Z-score: 309.1 bits: 66.7 E(85289): 1.8e-10 Smith-Waterman score: 438; 52.9% identity (77.9% similar) in 104 aa overlap (347-450:277-380) 320 330 340 350 360 370 pF1KB6 RGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGGSGPHEGRVEILHSGQWGTICD : .::.:::. ::::::. :.:::::.:: XP_005 LLCEKDIWQGGVCPQKMAAAVTCSFSHGPTFPIIRLAGGSSVHEGRVELYHAGQWGTVCD 250 260 270 280 290 300 380 390 400 410 420 430 pF1KB6 DRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCFGRESSIEECKIRQWGT :.:. ..:.::.:: :. . . :.::.:.::. :.:: : : : :::.: .:: XP_005 DQWDDADAEVICRQLGLSGIAKAWHQAYFGEGSGPVMLDEVRCTGNELSIEQCPKSSWGE 310 320 330 340 350 360 440 450 pF1KB6 RACSHSEDAGVTCTL . :.:.:::::.:: XP_005 HNCGHKEDAGVSCTPLTDGVIRLAGGKGSHEGRLEVYYRGQWGTVCDDGWTELNTYVVCR 370 380 390 400 410 420 >-- initn: 384 init1: 199 opt: 397 Z-score: 281.8 bits: 61.7 E(85289): 5.8e-09 Smith-Waterman score: 397; 50.5% identity (73.8% similar) in 107 aa overlap (346-449:381-485) 320 330 340 350 360 370 pF1KB6 SRGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTK--VRLVGGSGPHEGRVEILHSGQWGT :.: .::.::.: ::::.:. . ::::: XP_005 GNELSIEQCPKSSWGEHNCGHKEDAGVSCTPLTDGVIRLAGGKGSHEGRLEVYYRGQWGT 360 370 380 390 400 410 380 390 400 410 420 430 pF1KB6 ICDDRWEVRVGQVVCRSLGYP-GVQAVHKAAHFGQGTGPIWLNEVFCFGRESSIEECKIR .::: : ::::.::. : :: .: :: ..::::::..: : :.:. . .:. : XP_005 VCDDGWTELNTYVVCRQLGFKYGKQA--SANHFEESTGPIWLDDVSCSGKETRFLQCSRR 420 430 440 450 460 440 450 pF1KB6 QWGTRACSHSEDAGVTCTL ::: . ::: ::....: XP_005 QWGRHDCSHREDVSIACYPGGEGHRLSLGFPVRLMDGENKKEGRVEVFINGQWGTICDDG 470 480 490 500 510 520 >>XP_011530689 (OMIM: 249500,606709) PREDICTED: neurotry (573 aa) initn: 438 init1: 438 opt: 438 Z-score: 308.9 bits: 66.7 E(85289): 1.8e-10 Smith-Waterman score: 438; 52.9% identity (77.9% similar) in 104 aa overlap (347-450:277-380) 320 330 340 350 360 370 pF1KB6 RGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGGSGPHEGRVEILHSGQWGTICD : .::.:::. ::::::. :.:::::.:: XP_011 LLCEKDIWQGGVCPQKMAAAVTCSFSHGPTFPIIRLAGGSSVHEGRVELYHAGQWGTVCD 250 260 270 280 290 300 380 390 400 410 420 430 pF1KB6 DRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCFGRESSIEECKIRQWGT :.:. ..:.::.:: :. . . :.::.:.::. :.:: : : : :::.: .:: XP_011 DQWDDADAEVICRQLGLSGIAKAWHQAYFGEGSGPVMLDEVRCTGNELSIEQCPKSSWGE 310 320 330 340 350 360 440 450 pF1KB6 RACSHSEDAGVTCTL . :.:.:::::.:: XP_011 HNCGHKEDAGVSCTPLTDGVIRLAGGKGSHEGRLEVYYRGQWGTVCDDGWTELNTYVVCR 370 380 390 400 410 420 >>NP_003610 (OMIM: 249500,606709) neurotrypsin precursor (875 aa) initn: 727 init1: 438 opt: 438 Z-score: 306.9 bits: 67.0 E(85289): 2.3e-10 Smith-Waterman score: 438; 52.9% identity (77.9% similar) in 104 aa overlap (347-450:277-380) 320 330 340 350 360 370 pF1KB6 RGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGGSGPHEGRVEILHSGQWGTICD : .::.:::. ::::::. :.:::::.:: NP_003 LLCEKDIWQGGVCPQKMAAAVTCSFSHGPTFPIIRLAGGSSVHEGRVELYHAGQWGTVCD 250 260 270 280 290 300 380 390 400 410 420 430 pF1KB6 DRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCFGRESSIEECKIRQWGT :.:. ..:.::.:: :. . . :.::.:.::. :.:: : : : :::.: .:: NP_003 DQWDDADAEVICRQLGLSGIAKAWHQAYFGEGSGPVMLDEVRCTGNELSIEQCPKSSWGE 310 320 330 340 350 360 440 450 pF1KB6 RACSHSEDAGVTCTL . :.:.:::::.:: NP_003 HNCGHKEDAGVSCTPLTDGVIRLAGGKGSHEGRLEVYYRGQWGTVCDDGWTELNTYVVCR 370 380 390 400 410 420 >-- initn: 727 init1: 357 opt: 368 Z-score: 260.5 bits: 58.4 E(85289): 9.1e-08 Smith-Waterman score: 397; 50.5% identity (73.8% similar) in 107 aa overlap (346-449:381-485) 320 330 340 350 360 370 pF1KB6 SRGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTK--VRLVGGSGPHEGRVEILHSGQWGT :.: .::.::.: ::::.:. . ::::: NP_003 GNELSIEQCPKSSWGEHNCGHKEDAGVSCTPLTDGVIRLAGGKGSHEGRLEVYYRGQWGT 360 370 380 390 400 410 380 390 400 410 420 430 pF1KB6 ICDDRWEVRVGQVVCRSLGYP-GVQAVHKAAHFGQGTGPIWLNEVFCFGRESSIEECKIR .::: : ::::.::. : :: .: :: ..::::::..: : :.:. . .:. : NP_003 VCDDGWTELNTYVVCRQLGFKYGKQA--SANHFEESTGPIWLDDVSCSGKETRFLQCSRR 420 430 440 450 460 440 450 pF1KB6 QWGTRACSHSEDAGVTCTL ::: . ::: ::....: NP_003 QWGRHDCSHREDVSIACYPGGEGHRLSLGFPVRLMDGENKKEGRVEVFINGQWGTICDDG 470 480 490 500 510 520 >-- initn: 418 init1: 357 opt: 368 Z-score: 260.5 bits: 58.4 E(85289): 9.1e-08 Smith-Waterman score: 368; 46.8% identity (68.5% similar) in 111 aa overlap (339-449:489-599) 310 320 330 340 350 360 pF1KB6 GAIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGGSGPHEGRVEILHS : :. :. :::. : . .:::::.. . NP_003 ETRFLQCSRRQWGRHDCSHREDVSIACYPGGEGHRLSLGFPVRLMDGENKKEGRVEVFIN 460 470 480 490 500 510 370 380 390 400 410 420 pF1KB6 GQWGTICDDRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCFGRESSIEE ::::::::: : . . :.::.::: : .. :.::.: ::: ...: : : : :. . NP_003 GQWGTICDDGWTDKDAAVICRQLGYKGPARARTMAYFGEGKGPIHVDNVKCTGNERSLAD 520 530 540 550 560 570 430 440 450 pF1KB6 CKIRQWGTRACSHSEDAGVTCTL : .. : . : ::::::: : NP_003 CIKQDIGRHNCRHSEDAGVICDYFGKKASGNSNKESLSSVCGLRLLHRRQKRIIGGKNSL 580 590 600 610 620 630 >>NP_115587 (OMIM: 607318) lysyl oxidase homolog 4 precu (756 aa) initn: 675 init1: 374 opt: 410 Z-score: 289.0 bits: 63.4 E(85289): 2.3e-09 Smith-Waterman score: 410; 52.4% identity (78.6% similar) in 103 aa overlap (348-449:30-132) 320 330 340 350 360 370 pF1KB6 GLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGG-SGPHEGRVEILHSGQWGTICD ::.:::: : :.:::.:.::.:::::.:: NP_115 MAWSPPATLFLFLLLLGQPPPSRPQSLGTTKLRLVGPESKPEEGRLEVLHQGQWGTVCD 10 20 30 40 50 380 390 400 410 420 430 pF1KB6 DRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCFGRESSIEECKIRQWGT : . .. . :.::.::. .. . ..:..::: :::::..: : : :::...: ::. NP_115 DNFAIQEATVACRQLGFEAALTWAHSAKYGQGEGPIWLDNVRCVGTESSLDQCGSNGWGV 60 70 80 90 100 110 440 450 pF1KB6 RACSHSEDAGVTCTL ::::::.:: : NP_115 SDCSHSEDVGVICHPRRHRGYLSETVSNALGPQGRRLEEVRLKPILASAKQHSPVTEGAV 120 130 140 150 160 170 >-- initn: 453 init1: 315 opt: 330 Z-score: 235.9 bits: 53.6 E(85289): 2.1e-06 Smith-Waterman score: 330; 41.1% identity (66.7% similar) in 129 aa overlap (323-451:288-412) 300 310 320 330 340 350 pF1KB6 RGFPGPIGPPGLKGDRGAIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRL :: : :: . .::: : .::: NP_115 MANCQVQVAPARGKLRPACPGGMHAVVSCVAG-PHFRPPKTKPQRKGSWAE-EP--RVRL 260 270 280 290 300 310 360 370 380 390 400 410 pF1KB6 VGGSGPHEGRVEILHSGQWGTICDDRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPI .:. :::::.: . ::::.:: ::.. ..::::.::. ... . .:..::: ::: NP_115 RSGAQVGEGRVEVLMNRQWGTVCDHRWNLISASVVCRQLGFGSAREALFGARLGQGLGPI 320 330 340 350 360 370 420 430 440 450 pF1KB6 WLNEVFCFGRESSIEECKIRQWGTRACSHSEDAGVTCTL :.:: : : : .. .: . . .:.: .::.: :.. NP_115 HLSEVRCRGYERTLSDCPALEGSQNGCQHENDAAVRCNVPNMGFQNQVRLAGGRIPEEGL 380 390 400 410 420 430 NP_115 LEVQVEVNGVPRWGSVCSENWGLTEAMVACRQLGLGFAIHAYKETWFWSGTPRAQEVVMS 440 450 460 470 480 490 >>XP_006718083 (OMIM: 607318) PREDICTED: lysyl oxidase h (757 aa) initn: 675 init1: 374 opt: 410 Z-score: 289.0 bits: 63.4 E(85289): 2.3e-09 Smith-Waterman score: 410; 52.4% identity (78.6% similar) in 103 aa overlap (348-449:30-132) 320 330 340 350 360 370 pF1KB6 GLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGG-SGPHEGRVEILHSGQWGTICD ::.:::: : :.:::.:.::.:::::.:: XP_006 MAWSPPATLFLFLLLLGQPPPSRPQSLGTTKLRLVGPESKPEEGRLEVLHQGQWGTVCD 10 20 30 40 50 380 390 400 410 420 430 pF1KB6 DRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCFGRESSIEECKIRQWGT : . .. . :.::.::. .. . ..:..::: :::::..: : : :::...: ::. XP_006 DNFAIQEATVACRQLGFEAALTWAHSAKYGQGEGPIWLDNVRCVGTESSLDQCGSNGWGV 60 70 80 90 100 110 440 450 pF1KB6 RACSHSEDAGVTCTL ::::::.:: : XP_006 SDCSHSEDVGVICHPRRHRGYLSETVSNALGPQGRRLEEVRLKPILASAKQHSPVTEGAV 120 130 140 150 160 170 >-- initn: 453 init1: 315 opt: 340 Z-score: 242.5 bits: 54.8 E(85289): 9e-07 Smith-Waterman score: 340; 41.1% identity (66.7% similar) in 129 aa overlap (323-451:288-413) 300 310 320 330 340 350 pF1KB6 RGFPGPIGPPGLKGDRGAIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRL :: : :: . .::: : .::: XP_006 MANCQVQVAPARGKLRPACPGGMHAVVSCVAG-PHFRPPKTKPQRKGSWAEQEP--RVRL 260 270 280 290 300 310 360 370 380 390 400 410 pF1KB6 VGGSGPHEGRVEILHSGQWGTICDDRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPI .:. :::::.: . ::::.:: ::.. ..::::.::. ... . .:..::: ::: XP_006 RSGAQVGEGRVEVLMNRQWGTVCDHRWNLISASVVCRQLGFGSAREALFGARLGQGLGPI 320 330 340 350 360 370 420 430 440 450 pF1KB6 WLNEVFCFGRESSIEECKIRQWGTRACSHSEDAGVTCTL :.:: : : : .. .: . . .:.: .::.: :.. XP_006 HLSEVRCRGYERTLSDCPALEGSQNGCQHENDAAVRCNVPNMGFQNQVRLAGGRIPEEGL 380 390 400 410 420 430 XP_006 LEVQVEVNGVPRWGSVCSENWGLTEAMVACRQLGLGFAIHAYKETWFWSGTPRAQEVVMS 440 450 460 470 480 490 >>XP_005270273 (OMIM: 607318) PREDICTED: lysyl oxidase h (757 aa) initn: 675 init1: 374 opt: 410 Z-score: 289.0 bits: 63.4 E(85289): 2.3e-09 Smith-Waterman score: 410; 52.4% identity (78.6% similar) in 103 aa overlap (348-449:30-132) 320 330 340 350 360 370 pF1KB6 GLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRLVGG-SGPHEGRVEILHSGQWGTICD ::.:::: : :.:::.:.::.:::::.:: XP_005 MAWSPPATLFLFLLLLGQPPPSRPQSLGTTKLRLVGPESKPEEGRLEVLHQGQWGTVCD 10 20 30 40 50 380 390 400 410 420 430 pF1KB6 DRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPIWLNEVFCFGRESSIEECKIRQWGT : . .. . :.::.::. .. . ..:..::: :::::..: : : :::...: ::. XP_005 DNFAIQEATVACRQLGFEAALTWAHSAKYGQGEGPIWLDNVRCVGTESSLDQCGSNGWGV 60 70 80 90 100 110 440 450 pF1KB6 RACSHSEDAGVTCTL ::::::.:: : XP_005 SDCSHSEDVGVICHPRRHRGYLSETVSNALGPQGRRLEEVRLKPILASAKQHSPVTEGAV 120 130 140 150 160 170 >-- initn: 453 init1: 315 opt: 340 Z-score: 242.5 bits: 54.8 E(85289): 9e-07 Smith-Waterman score: 340; 41.1% identity (66.7% similar) in 129 aa overlap (323-451:288-413) 300 310 320 330 340 350 pF1KB6 RGFPGPIGPPGLKGDRGAIGFPGSRGLPGYAGRPGNSGPKGQKGEKGSGNTLTPFTKVRL :: : :: . .::: : .::: XP_005 MANCQVQVAPARGKLRPACPGGMHAVVSCVAG-PHFRPPKTKPQRKGSWAEQEP--RVRL 260 270 280 290 300 310 360 370 380 390 400 410 pF1KB6 VGGSGPHEGRVEILHSGQWGTICDDRWEVRVGQVVCRSLGYPGVQAVHKAAHFGQGTGPI .:. :::::.: . ::::.:: ::.. ..::::.::. ... . .:..::: ::: XP_005 RSGAQVGEGRVEVLMNRQWGTVCDHRWNLISASVVCRQLGFGSAREALFGARLGQGLGPI 320 330 340 350 360 370 420 430 440 450 pF1KB6 WLNEVFCFGRESSIEECKIRQWGTRACSHSEDAGVTCTL :.:: : : : .. .: . . .:.: .::.: :.. XP_005 HLSEVRCRGYERTLSDCPALEGSQNGCQHENDAAVRCNVPNMGFQNQVRLAGGRIPEEGL 380 390 400 410 420 430 XP_005 LEVQVEVNGVPRWGSVCSENWGLTEAMVACRQLGLGFAIHAYKETWFWSGTPRAQEVVMS 440 450 460 470 480 490 451 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 01:32:24 2016 done: Tue Nov 8 01:32:25 2016 Total Scan time: 10.540 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]