FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6676, 286 aa 1>>>pF1KE6676 286 - 286 aa - 286 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.8147+/-0.000879; mu= 17.2758+/- 0.052 mean_var=56.5145+/-11.610, 0's: 0 Z-trim(105.3): 29 B-trim: 0 in 0/49 Lambda= 0.170606 statistics sampled from 8323 (8339) to 8323 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.626), E-opt: 0.2 (0.256), width: 16 Scan time: 1.550 The best scores are: opt bits E(32554) CCDS5956.1 CLN8 gene_id:2055|Hs108|chr8 ( 286) 2010 502.9 1.1e-142 >>CCDS5956.1 CLN8 gene_id:2055|Hs108|chr8 (286 aa) initn: 2010 init1: 2010 opt: 2010 Z-score: 2675.1 bits: 502.9 E(32554): 1.1e-142 Smith-Waterman score: 2010; 100.0% identity (100.0% similar) in 286 aa overlap (1-286:1-286) 10 20 30 40 50 60 pF1KE6 MNPASDGGTSESIFDLDYASWGIRSTLMVAGFVFYLGVFVVCHQLSSSLNATYRSLVARE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 MNPASDGGTSESIFDLDYASWGIRSTLMVAGFVFYLGVFVVCHQLSSSLNATYRSLVARE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 KVFWDLAATRAVFGVQSTAAGLWALLGDPVLHADKARGQQNWCWFHITTATGFFCFENVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 KVFWDLAATRAVFGVQSTAAGLWALLGDPVLHADKARGQQNWCWFHITTATGFFCFENVA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 VHLSNLIFRTFDLFLVIHHLFAFLGFLGCLVNLQAGHYLAMTTLLLEMSTPFTCVSWMLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 VHLSNLIFRTFDLFLVIHHLFAFLGFLGCLVNLQAGHYLAMTTLLLEMSTPFTCVSWMLL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 KAGWSESLFWKLNQWLMIHMFHCRMVLTYHMWWVCFWHWDGLVSSLYLPHLTLFLVGLAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS59 KAGWSESLFWKLNQWLMIHMFHCRMVLTYHMWWVCFWHWDGLVSSLYLPHLTLFLVGLAL 190 200 210 220 230 240 250 260 270 280 pF1KE6 LTLIINPYWTHKKTQQLLNPVDWNFAQPEAKSRPEGNGQLLRKKRP :::::::::::::::::::::::::::::::::::::::::::::: CCDS59 LTLIINPYWTHKKTQQLLNPVDWNFAQPEAKSRPEGNGQLLRKKRP 250 260 270 280 286 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 15:19:57 2016 done: Tue Nov 8 15:19:57 2016 Total Scan time: 1.550 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]