FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5176, 115 aa 1>>>pF1KE5176 115 - 115 aa - 115 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5389+/-0.000682; mu= 9.4653+/- 0.041 mean_var=68.3225+/-13.596, 0's: 0 Z-trim(110.2): 16 B-trim: 81 in 1/52 Lambda= 0.155164 statistics sampled from 11434 (11438) to 11434 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.743), E-opt: 0.2 (0.351), width: 16 Scan time: 1.260 The best scores are: opt bits E(32554) CCDS47599.1 CRCP gene_id:27297|Hs108|chr7 ( 115) 714 167.9 1.3e-42 CCDS55116.1 CRCP gene_id:27297|Hs108|chr7 ( 141) 707 166.3 4.5e-42 CCDS5532.1 CRCP gene_id:27297|Hs108|chr7 ( 148) 638 150.9 2.1e-37 CCDS47600.1 CRCP gene_id:27297|Hs108|chr7 ( 71) 417 101.3 8.6e-23 >>CCDS47599.1 CRCP gene_id:27297|Hs108|chr7 (115 aa) initn: 714 init1: 714 opt: 714 Z-score: 878.7 bits: 167.9 E(32554): 1.3e-42 Smith-Waterman score: 714; 100.0% identity (100.0% similar) in 115 aa overlap (1-115:1-115) 10 20 30 40 50 60 pF1KE5 MEVKDANSALLSNYETLKYISKTPCRHQSPEIVREFLTALKSHKLTKAEKLQLLNHRPVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 MEVKDANSALLSNYETLKYISKTPCRHQSPEIVREFLTALKSHKLTKAEKLQLLNHRPVT 10 20 30 40 50 60 70 80 90 100 110 pF1KE5 AVEIQLMVEESEERLTEEQIEALLHTVTSILPAEPEAEQKKNTNSNVAMDEEDPA ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 AVEIQLMVEESEERLTEEQIEALLHTVTSILPAEPEAEQKKNTNSNVAMDEEDPA 70 80 90 100 110 >>CCDS55116.1 CRCP gene_id:27297|Hs108|chr7 (141 aa) initn: 707 init1: 707 opt: 707 Z-score: 868.9 bits: 166.3 E(32554): 4.5e-42 Smith-Waterman score: 707; 100.0% identity (100.0% similar) in 114 aa overlap (2-115:28-141) 10 20 30 pF1KE5 MEVKDANSALLSNYETLKYISKTPCRHQSPEIVR ::::::::::::::::::::::::::::::::: CCDS55 MQRGDPGEHLGARSWHLGAVGGGGDSCEVKDANSALLSNYETLKYISKTPCRHQSPEIVR 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE5 EFLTALKSHKLTKAEKLQLLNHRPVTAVEIQLMVEESEERLTEEQIEALLHTVTSILPAE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 EFLTALKSHKLTKAEKLQLLNHRPVTAVEIQLMVEESEERLTEEQIEALLHTVTSILPAE 70 80 90 100 110 120 100 110 pF1KE5 PEAEQKKNTNSNVAMDEEDPA ::::::::::::::::::::: CCDS55 PEAEQKKNTNSNVAMDEEDPA 130 140 >>CCDS5532.1 CRCP gene_id:27297|Hs108|chr7 (148 aa) initn: 638 init1: 638 opt: 638 Z-score: 785.1 bits: 150.9 E(32554): 2.1e-37 Smith-Waterman score: 638; 100.0% identity (100.0% similar) in 102 aa overlap (14-115:47-148) 10 20 30 40 pF1KE5 MEVKDANSALLSNYETLKYISKTPCRHQSPEIVREFLTALKSH :::::::::::::::::::::::::::::: CCDS55 FQLLTDLKEQRKESGKNKHSSGQQNLNTITYETLKYISKTPCRHQSPEIVREFLTALKSH 20 30 40 50 60 70 50 60 70 80 90 100 pF1KE5 KLTKAEKLQLLNHRPVTAVEIQLMVEESEERLTEEQIEALLHTVTSILPAEPEAEQKKNT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS55 KLTKAEKLQLLNHRPVTAVEIQLMVEESEERLTEEQIEALLHTVTSILPAEPEAEQKKNT 80 90 100 110 120 130 110 pF1KE5 NSNVAMDEEDPA :::::::::::: CCDS55 NSNVAMDEEDPA 140 >>CCDS47600.1 CRCP gene_id:27297|Hs108|chr7 (71 aa) initn: 417 init1: 417 opt: 417 Z-score: 522.6 bits: 101.3 E(32554): 8.6e-23 Smith-Waterman score: 417; 100.0% identity (100.0% similar) in 68 aa overlap (48-115:4-71) 20 30 40 50 60 70 pF1KE5 KYISKTPCRHQSPEIVREFLTALKSHKLTKAEKLQLLNHRPVTAVEIQLMVEESEERLTE :::::::::::::::::::::::::::::: CCDS47 MEVAEKLQLLNHRPVTAVEIQLMVEESEERLTE 10 20 30 80 90 100 110 pF1KE5 EQIEALLHTVTSILPAEPEAEQKKNTNSNVAMDEEDPA :::::::::::::::::::::::::::::::::::::: CCDS47 EQIEALLHTVTSILPAEPEAEQKKNTNSNVAMDEEDPA 40 50 60 70 115 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 10:37:17 2016 done: Tue Nov 8 10:37:17 2016 Total Scan time: 1.260 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]