FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1701, 206 aa 1>>>pF1KE1701 206 - 206 aa - 206 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.0862+/-0.000723; mu= 14.7528+/- 0.044 mean_var=66.6761+/-13.008, 0's: 0 Z-trim(109.4): 19 B-trim: 0 in 0/50 Lambda= 0.157069 statistics sampled from 10866 (10880) to 10866 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.719), E-opt: 0.2 (0.334), width: 16 Scan time: 1.840 The best scores are: opt bits E(32554) CCDS5360.1 SOSTDC1 gene_id:25928|Hs108|chr7 ( 206) 1430 332.3 1.2e-91 CCDS11468.1 SOST gene_id:50964|Hs108|chr17 ( 213) 462 113.0 1.4e-25 >>CCDS5360.1 SOSTDC1 gene_id:25928|Hs108|chr7 (206 aa) initn: 1430 init1: 1430 opt: 1430 Z-score: 1758.6 bits: 332.3 E(32554): 1.2e-91 Smith-Waterman score: 1430; 100.0% identity (100.0% similar) in 206 aa overlap (1-206:1-206) 10 20 30 40 50 60 pF1KE1 MLPPAIHFYLLPLACILMKSCLAFKNDATEILYSHVVKPVPAHPSSNSTLNQARNGGRHF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 MLPPAIHFYLLPLACILMKSCLAFKNDATEILYSHVVKPVPAHPSSNSTLNQARNGGRHF 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 SNTGLDRNTRVQVGCRELRSTKYISDGQCTSISPLKELVCAGECLPLPVLPNWIGGGYGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 SNTGLDRNTRVQVGCRELRSTKYISDGQCTSISPLKELVCAGECLPLPVLPNWIGGGYGT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 KYWSRRSSQEWRCVNDKTRTQRIQLQCQDGSTRTYKITVVTACKCKRYTRQHNESSHNFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS53 KYWSRRSSQEWRCVNDKTRTQRIQLQCQDGSTRTYKITVVTACKCKRYTRQHNESSHNFE 130 140 150 160 170 180 190 200 pF1KE1 SMSPAKPVQHHRERKRASKSSKHSMS :::::::::::::::::::::::::: CCDS53 SMSPAKPVQHHRERKRASKSSKHSMS 190 200 >>CCDS11468.1 SOST gene_id:50964|Hs108|chr17 (213 aa) initn: 469 init1: 227 opt: 462 Z-score: 572.9 bits: 113.0 E(32554): 1.4e-25 Smith-Waterman score: 464; 40.1% identity (63.8% similar) in 207 aa overlap (11-202:3-203) 10 20 30 40 pF1KE1 MLPPAIHFYLLPLA----CILMKSCL---------AFKNDATEILYSHVVKPVPAHP-SS :::: :.:... . :::::::::. : : . CCDS11 MQLPLALCLVCLLVHTAFRVVEGQGWQAFKNDATEIIPELGEYPEPPPELEN 10 20 30 40 50 50 60 70 80 90 100 pF1KE1 NSTLNQARNGGRHFSNTGLDRNTRVQVGCRELRSTKYISDGQCTSISPLKELVCAGECLP :.:.:.:.:::: . .. . . .::::. :.:..:: : : .:. ::::.:.: : CCDS11 NKTMNRAENGGRP-PHHPFETKDVSEYSCRELHFTRYVTDGPCRSAKPVTELVCSGQCGP 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE1 LPVLPNWIGGGYGTKYWSRRSSQEWRCVNDKTRTQRIQLQCQDG-STRTYKITVVTACKC .::: :: : :.: : :. ..::. :. :.::.:: : : . :. :. .:..::: CCDS11 ARLLPNAIGRG---KWW-RPSGPDFRCIPDRYRAQRVQLLCPGGEAPRARKVRLVASCKC 120 130 140 150 160 170 180 190 200 pF1KE1 KRYTRQHNESSHNFESMSPAKPVQHHRERKRASKSSKHSMS :: :: ::.: . . :.: . .. : :: .:.: CCDS11 KRLTRFHNQSELKDFGTEAARPQKGRKPRPRA-RSAKANQAELENAY 170 180 190 200 210 206 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 16:26:24 2016 done: Sun Nov 6 16:26:24 2016 Total Scan time: 1.840 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]