FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2716, 235 aa 1>>>pF1KE2716 235 - 235 aa - 235 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.3881+/-0.000635; mu= 9.3788+/- 0.039 mean_var=84.7194+/-16.488, 0's: 0 Z-trim(113.1): 5 B-trim: 0 in 0/51 Lambda= 0.139342 statistics sampled from 13757 (13761) to 13757 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.766), E-opt: 0.2 (0.423), width: 16 Scan time: 1.170 The best scores are: opt bits E(32554) CCDS5239.1 MYCT1 gene_id:80177|Hs108|chr6 ( 235) 1566 323.7 6.3e-89 >>CCDS5239.1 MYCT1 gene_id:80177|Hs108|chr6 (235 aa) initn: 1566 init1: 1566 opt: 1566 Z-score: 1710.0 bits: 323.7 E(32554): 6.3e-89 Smith-Waterman score: 1566; 100.0% identity (100.0% similar) in 235 aa overlap (1-235:1-235) 10 20 30 40 50 60 pF1KE2 MRTQVYEGLCKNYFSLAVLQRDRIKLLFFDILVFLSVFLLFLLFLVDIMANNTTSLGSPW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 MRTQVYEGLCKNYFSLAVLQRDRIKLLFFDILVFLSVFLLFLLFLVDIMANNTTSLGSPW 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 PENFWEDLIMSFTVSMAIGLVLGGFIWAVFICLSRRRRASAPISQWSSSRRSRSSYTHGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 PENFWEDLIMSFTVSMAIGLVLGGFIWAVFICLSRRRRASAPISQWSSSRRSRSSYTHGL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 NRTGFYRHSGCERRSNLSLASLTFQRQASLEQANSFPRKSSFRASTFHPFLQCPPLPVET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 NRTGFYRHSGCERRSNLSLASLTFQRQASLEQANSFPRKSSFRASTFHPFLQCPPLPVET 130 140 150 160 170 180 190 200 210 220 230 pF1KE2 ESQLVTLPSSNISPTISTSHSLSRPDYWSSNSLRVGLSTPPPPAYESIIKAFPDS ::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS52 ESQLVTLPSSNISPTISTSHSLSRPDYWSSNSLRVGLSTPPPPAYESIIKAFPDS 190 200 210 220 230 235 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Jan 30 11:05:51 2018 done: Tue Jan 30 11:05:52 2018 Total Scan time: 1.170 Total Display time: 0.010 Function used was FASTA [36.3.4 Apr, 2011]