FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4060, 334 aa 1>>>pF1KE4060 334 - 334 aa - 334 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5415+/-0.000304; mu= 15.4948+/- 0.019 mean_var=80.3674+/-16.251, 0's: 0 Z-trim(118.2): 11 B-trim: 36 in 1/50 Lambda= 0.143065 statistics sampled from 30900 (30911) to 30900 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.735), E-opt: 0.2 (0.362), width: 16 Scan time: 7.750 The best scores are: opt bits E(85289) NP_054747 (OMIM: 259720,607649) osteopetrosis-asso ( 334) 2239 471.3 1.2e-132 >>NP_054747 (OMIM: 259720,607649) osteopetrosis-associat (334 aa) initn: 2239 init1: 2239 opt: 2239 Z-score: 2502.3 bits: 471.3 E(85289): 1.2e-132 Smith-Waterman score: 2239; 100.0% identity (100.0% similar) in 334 aa overlap (1-334:1-334) 10 20 30 40 50 60 pF1KE4 MEPGPTAAQRRCSLPPWLPLGLLLWSGLALGALPFGSSPHRVFHDLLSEQQLLEVEDLSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_054 MEPGPTAAQRRCSLPPWLPLGLLLWSGLALGALPFGSSPHRVFHDLLSEQQLLEVEDLSL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 SLLQGGGLGPLSLPPDLPDLDPECRELLLDFANSSAELTGCLVRSARPVRLCQTCYPLFQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_054 SLLQGGGLGPLSLPPDLPDLDPECRELLLDFANSSAELTGCLVRSARPVRLCQTCYPLFQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 QVVSKMDNISRAAGNTSESQSCARSLLMADRMQIVVILSEFFNTTWQEANCANCLTNNSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_054 QVVSKMDNISRAAGNTSESQSCARSLLMADRMQIVVILSEFFNTTWQEANCANCLTNNSE 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 ELSNSTVYFLNLFNHTLTCFEHNLQGNAHSLLQTKNYSEVCKNCREAYKTLSSLYSEMQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_054 ELSNSTVYFLNLFNHTLTCFEHNLQGNAHSLLQTKNYSEVCKNCREAYKTLSSLYSEMQK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 MNELENKAEPGTHLCIDVEDAMNITRKLWSRTFNCSVPCSDTVPVIAVSVFILFLPVVFY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_054 MNELENKAEPGTHLCIDVEDAMNITRKLWSRTFNCSVPCSDTVPVIAVSVFILFLPVVFY 250 260 270 280 290 300 310 320 330 pF1KE4 LSSFLHSEQKKRKLILPKRLKSSTSFANIQENSN :::::::::::::::::::::::::::::::::: NP_054 LSSFLHSEQKKRKLILPKRLKSSTSFANIQENSN 310 320 330 334 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:15:34 2016 done: Sun Nov 6 04:15:35 2016 Total Scan time: 7.750 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]