FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6533, 112 aa 1>>>pF1KE6533 112 - 112 aa - 112 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.7793+/-0.000689; mu= 12.7506+/- 0.041 mean_var=72.2055+/-13.639, 0's: 0 Z-trim(111.0): 23 B-trim: 43 in 1/49 Lambda= 0.150935 statistics sampled from 12056 (12067) to 12056 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.747), E-opt: 0.2 (0.371), width: 16 Scan time: 1.390 The best scores are: opt bits E(32554) CCDS4811.1 CLPS gene_id:1208|Hs108|chr6 ( 112) 763 174.3 1.3e-44 CCDS75437.1 CLPS gene_id:1208|Hs108|chr6 ( 98) 598 138.4 8e-34 CCDS75438.1 CLPS gene_id:1208|Hs108|chr6 ( 71) 308 75.1 6.5e-15 >>CCDS4811.1 CLPS gene_id:1208|Hs108|chr6 (112 aa) initn: 763 init1: 763 opt: 763 Z-score: 914.1 bits: 174.3 E(32554): 1.3e-44 Smith-Waterman score: 763; 100.0% identity (100.0% similar) in 112 aa overlap (1-112:1-112) 10 20 30 40 50 60 pF1KE6 MEKILILLLVALSVAYAAPGPRGIIINLENGELCMNSAQCKSNCCQHSSALGLARCTSMA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 MEKILILLLVALSVAYAAPGPRGIIINLENGELCMNSAQCKSNCCQHSSALGLARCTSMA 10 20 30 40 50 60 70 80 90 100 110 pF1KE6 SENSECSVKTLYGIYYKCPCERGLTCEGDKTIVGSITNTNFGICHDAGRSKQ :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 SENSECSVKTLYGIYYKCPCERGLTCEGDKTIVGSITNTNFGICHDAGRSKQ 70 80 90 100 110 >>CCDS75437.1 CLPS gene_id:1208|Hs108|chr6 (98 aa) initn: 596 init1: 596 opt: 598 Z-score: 720.7 bits: 138.4 E(32554): 8e-34 Smith-Waterman score: 598; 91.5% identity (92.6% similar) in 94 aa overlap (19-112:5-98) 10 20 30 40 50 60 pF1KE6 MEKILILLLVALSVAYAAPGPRGIIINLENGELCMNSAQCKSNCCQHSSALGLARCTSMA : : . :::::::::::::::::::::::::::::::: CCDS75 MILLPQPPKKLGLQENGELCMNSAQCKSNCCQHSSALGLARCTSMA 10 20 30 40 70 80 90 100 110 pF1KE6 SENSECSVKTLYGIYYKCPCERGLTCEGDKTIVGSITNTNFGICHDAGRSKQ :::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS75 SENSECSVKTLYGIYYKCPCERGLTCEGDKTIVGSITNTNFGICHDAGRSKQ 50 60 70 80 90 >>CCDS75438.1 CLPS gene_id:1208|Hs108|chr6 (71 aa) initn: 461 init1: 308 opt: 308 Z-score: 381.2 bits: 75.1 E(32554): 6.5e-15 Smith-Waterman score: 383; 63.4% identity (63.4% similar) in 112 aa overlap (1-112:1-71) 10 20 30 40 50 60 pF1KE6 MEKILILLLVALSVAYAAPGPRGIIINLENGELCMNSAQCKSNCCQHSSALGLARCTSMA :::::::::::::::::::::::::::: CCDS75 MEKILILLLVALSVAYAAPGPRGIIINL-------------------------------- 10 20 70 80 90 100 110 pF1KE6 SENSECSVKTLYGIYYKCPCERGLTCEGDKTIVGSITNTNFGICHDAGRSKQ ::::::::::::::::::::::::::::::::::::::::::: CCDS75 ---------TLYGIYYKCPCERGLTCEGDKTIVGSITNTNFGICHDAGRSKQ 30 40 50 60 70 112 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:10:20 2016 done: Tue Nov 8 14:10:21 2016 Total Scan time: 1.390 Total Display time: -0.050 Function used was FASTA [36.3.4 Apr, 2011]