FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2066, 725 aa 1>>>pF1KE2066 725 - 725 aa - 725 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 11.4470+/-0.00151; mu= -4.2246+/- 0.089 mean_var=534.0994+/-118.151, 0's: 0 Z-trim(108.5): 206 B-trim: 162 in 1/54 Lambda= 0.055496 statistics sampled from 10104 (10268) to 10104 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.621), E-opt: 0.2 (0.315), width: 16 Scan time: 3.470 The best scores are: opt bits E(32554) CCDS47334.1 HMMR gene_id:3161|Hs108|chr5 ( 725) 4510 376.9 6e-104 CCDS4362.1 HMMR gene_id:3161|Hs108|chr5 ( 724) 4492 375.5 1.6e-103 CCDS4363.1 HMMR gene_id:3161|Hs108|chr5 ( 709) 3929 330.4 5.9e-90 CCDS47335.1 HMMR gene_id:3161|Hs108|chr5 ( 638) 3919 329.5 9.7e-90 >>CCDS47334.1 HMMR gene_id:3161|Hs108|chr5 (725 aa) initn: 4510 init1: 4510 opt: 4510 Z-score: 1979.7 bits: 376.9 E(32554): 6e-104 Smith-Waterman score: 4510; 99.9% identity (100.0% similar) in 725 aa overlap (1-725:1-725) 10 20 30 40 50 60 pF1KE2 MSFPKAPLKRFNDPSGCAPSPGAYDVKTLEVLKGPVSFQKSQRFKQQKESKQNLNVDKDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 MSFPKAPLKRFNDPSGCAPSPGAYDVKTLEVLKGPVSFQKSQRFKQQKESKQNLNVDKDT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 TLPASARKVKSSESKKESQKNDKDLKILEKEIRVLLQERGAQDRRIQDLETELEKMEARL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 TLPASARKVKSSESKKESQKNDKDLKILEKEIRVLLQERGAQDRRIQDLETELEKMEARL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 NAALREKTSLSANNATLEKQLIELTRTNELLKSKFSENGNQKNLRILSLELMKLRNKRET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 NAALREKTSLSANNATLEKQLIELTRTNELLKSKFSENGNQKNLRILSLELMKLRNKRET 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 KMRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSIEKEKIDEKSETEKLLEYIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 KMRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSIEKEKIDEKSETEKLLEYIEE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 ISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 ISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 KEDHVNRNREHNENLNAEMQNLKQKFILEQQEHEKLQQKELQIDSLLQQEKELSSSLHQK ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: CCDS47 KEDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQKELQIDSLLQQEKELSSSLHQK 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 LCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 LCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEK 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE2 LKGKEAELEKSSAAHTQATLLLQEKYDSMVQSLEDVTAQFESYKALTASEIEDLKLENSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 LKGKEAELEKSSAAHTQATLLLQEKYDSMVQSLEDVTAQFESYKALTASEIEDLKLENSS 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE2 LQEKAAKAGKNAEDVQHQILATESSNQEYVRMLLDLQTKSALKETEIKEITVSFLQKITD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 LQEKAAKAGKNAEDVQHQILATESSNQEYVRMLLDLQTKSALKETEIKEITVSFLQKITD 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE2 LQNQLKQQEEDFRKQLEDEEGRKAEKENTTAELTEEINKWRLLYEELYNKTKPFQLQLDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 LQNQLKQQEEDFRKQLEDEEGRKAEKENTTAELTEEINKWRLLYEELYNKTKPFQLQLDA 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE2 FEVEKQALLNEHGAAQEQLNKIRDSYAKLLGHQNLKQKIKHVVKLKDENSQLKSEVSKLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 FEVEKQALLNEHGAAQEQLNKIRDSYAKLLGHQNLKQKIKHVVKLKDENSQLKSEVSKLR 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE2 CQLAKKKQSETKLQEELNKVLGIKHFDPSKAFHHESKENFALKTPLKEGNTNCYRAPMEC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 CQLAKKKQSETKLQEELNKVLGIKHFDPSKAFHHESKENFALKTPLKEGNTNCYRAPMEC 670 680 690 700 710 720 pF1KE2 QESWK ::::: CCDS47 QESWK >>CCDS4362.1 HMMR gene_id:3161|Hs108|chr5 (724 aa) initn: 4020 init1: 4020 opt: 4492 Z-score: 1971.9 bits: 375.5 E(32554): 1.6e-103 Smith-Waterman score: 4492; 99.7% identity (99.9% similar) in 725 aa overlap (1-725:1-724) 10 20 30 40 50 60 pF1KE2 MSFPKAPLKRFNDPSGCAPSPGAYDVKTLEVLKGPVSFQKSQRFKQQKESKQNLNVDKDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MSFPKAPLKRFNDPSGCAPSPGAYDVKTLEVLKGPVSFQKSQRFKQQKESKQNLNVDKDT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 TLPASARKVKSSESKKESQKNDKDLKILEKEIRVLLQERGAQDRRIQDLETELEKMEARL ::::::::::::::: :::::::::::::::::::::::::::::::::::::::::::: CCDS43 TLPASARKVKSSESK-ESQKNDKDLKILEKEIRVLLQERGAQDRRIQDLETELEKMEARL 70 80 90 100 110 130 140 150 160 170 180 pF1KE2 NAALREKTSLSANNATLEKQLIELTRTNELLKSKFSENGNQKNLRILSLELMKLRNKRET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 NAALREKTSLSANNATLEKQLIELTRTNELLKSKFSENGNQKNLRILSLELMKLRNKRET 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE2 KMRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSIEKEKIDEKSETEKLLEYIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KMRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSIEKEKIDEKSETEKLLEYIEE 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE2 ISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 ISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKE 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE2 KEDHVNRNREHNENLNAEMQNLKQKFILEQQEHEKLQQKELQIDSLLQQEKELSSSLHQK ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: CCDS43 KEDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQKELQIDSLLQQEKELSSSLHQK 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE2 LCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEK 360 370 380 390 400 410 430 440 450 460 470 480 pF1KE2 LKGKEAELEKSSAAHTQATLLLQEKYDSMVQSLEDVTAQFESYKALTASEIEDLKLENSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LKGKEAELEKSSAAHTQATLLLQEKYDSMVQSLEDVTAQFESYKALTASEIEDLKLENSS 420 430 440 450 460 470 490 500 510 520 530 540 pF1KE2 LQEKAAKAGKNAEDVQHQILATESSNQEYVRMLLDLQTKSALKETEIKEITVSFLQKITD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LQEKAAKAGKNAEDVQHQILATESSNQEYVRMLLDLQTKSALKETEIKEITVSFLQKITD 480 490 500 510 520 530 550 560 570 580 590 600 pF1KE2 LQNQLKQQEEDFRKQLEDEEGRKAEKENTTAELTEEINKWRLLYEELYNKTKPFQLQLDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LQNQLKQQEEDFRKQLEDEEGRKAEKENTTAELTEEINKWRLLYEELYNKTKPFQLQLDA 540 550 560 570 580 590 610 620 630 640 650 660 pF1KE2 FEVEKQALLNEHGAAQEQLNKIRDSYAKLLGHQNLKQKIKHVVKLKDENSQLKSEVSKLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 FEVEKQALLNEHGAAQEQLNKIRDSYAKLLGHQNLKQKIKHVVKLKDENSQLKSEVSKLR 600 610 620 630 640 650 670 680 690 700 710 720 pF1KE2 CQLAKKKQSETKLQEELNKVLGIKHFDPSKAFHHESKENFALKTPLKEGNTNCYRAPMEC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 CQLAKKKQSETKLQEELNKVLGIKHFDPSKAFHHESKENFALKTPLKEGNTNCYRAPMEC 660 670 680 690 700 710 pF1KE2 QESWK ::::: CCDS43 QESWK 720 >>CCDS4363.1 HMMR gene_id:3161|Hs108|chr5 (709 aa) initn: 3926 init1: 3926 opt: 3929 Z-score: 1728.4 bits: 330.4 E(32554): 5.9e-90 Smith-Waterman score: 4370; 97.7% identity (97.8% similar) in 725 aa overlap (1-725:1-709) 10 20 30 40 50 60 pF1KE2 MSFPKAPLKRFNDPSGCAPSPGAYDVKTLEVLKGPVSFQKSQRFKQQKESKQNLNVDKDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MSFPKAPLKRFNDPSGCAPSPGAYDVKTLEVLKGPVSFQKSQRFKQQKESKQNLNVDKDT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 TLPASARKVKSSESKKESQKNDKDLKILEKEIRVLLQERGAQDRRIQDLETELEKMEARL ::::::::::::::: ::::::::::::::::::::::::::::: CCDS43 TLPASARKVKSSESK----------------IRVLLQERGAQDRRIQDLETELEKMEARL 70 80 90 100 130 140 150 160 170 180 pF1KE2 NAALREKTSLSANNATLEKQLIELTRTNELLKSKFSENGNQKNLRILSLELMKLRNKRET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 NAALREKTSLSANNATLEKQLIELTRTNELLKSKFSENGNQKNLRILSLELMKLRNKRET 110 120 130 140 150 160 190 200 210 220 230 240 pF1KE2 KMRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSIEKEKIDEKSETEKLLEYIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KMRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSIEKEKIDEKSETEKLLEYIEE 170 180 190 200 210 220 250 260 270 280 290 300 pF1KE2 ISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 ISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKE 230 240 250 260 270 280 310 320 330 340 350 360 pF1KE2 KEDHVNRNREHNENLNAEMQNLKQKFILEQQEHEKLQQKELQIDSLLQQEKELSSSLHQK ::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::: CCDS43 KEDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQKELQIDSLLQQEKELSSSLHQK 290 300 310 320 330 340 370 380 390 400 410 420 pF1KE2 LCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LCSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEK 350 360 370 380 390 400 430 440 450 460 470 480 pF1KE2 LKGKEAELEKSSAAHTQATLLLQEKYDSMVQSLEDVTAQFESYKALTASEIEDLKLENSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LKGKEAELEKSSAAHTQATLLLQEKYDSMVQSLEDVTAQFESYKALTASEIEDLKLENSS 410 420 430 440 450 460 490 500 510 520 530 540 pF1KE2 LQEKAAKAGKNAEDVQHQILATESSNQEYVRMLLDLQTKSALKETEIKEITVSFLQKITD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LQEKAAKAGKNAEDVQHQILATESSNQEYVRMLLDLQTKSALKETEIKEITVSFLQKITD 470 480 490 500 510 520 550 560 570 580 590 600 pF1KE2 LQNQLKQQEEDFRKQLEDEEGRKAEKENTTAELTEEINKWRLLYEELYNKTKPFQLQLDA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LQNQLKQQEEDFRKQLEDEEGRKAEKENTTAELTEEINKWRLLYEELYNKTKPFQLQLDA 530 540 550 560 570 580 610 620 630 640 650 660 pF1KE2 FEVEKQALLNEHGAAQEQLNKIRDSYAKLLGHQNLKQKIKHVVKLKDENSQLKSEVSKLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 FEVEKQALLNEHGAAQEQLNKIRDSYAKLLGHQNLKQKIKHVVKLKDENSQLKSEVSKLR 590 600 610 620 630 640 670 680 690 700 710 720 pF1KE2 CQLAKKKQSETKLQEELNKVLGIKHFDPSKAFHHESKENFALKTPLKEGNTNCYRAPMEC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 CQLAKKKQSETKLQEELNKVLGIKHFDPSKAFHHESKENFALKTPLKEGNTNCYRAPMEC 650 660 670 680 690 700 pF1KE2 QESWK ::::: CCDS43 QESWK >>CCDS47335.1 HMMR gene_id:3161|Hs108|chr5 (638 aa) initn: 3919 init1: 3919 opt: 3919 Z-score: 1724.6 bits: 329.5 E(32554): 9.7e-90 Smith-Waterman score: 3919; 99.8% identity (100.0% similar) in 634 aa overlap (92-725:5-638) 70 80 90 100 110 120 pF1KE2 LPASARKVKSSESKKESQKNDKDLKILEKEIRVLLQERGAQDRRIQDLETELEKMEARLN :::::::::::::::::::::::::::::: CCDS47 MTLLIRVLLQERGAQDRRIQDLETELEKMEARLN 10 20 30 130 140 150 160 170 180 pF1KE2 AALREKTSLSANNATLEKQLIELTRTNELLKSKFSENGNQKNLRILSLELMKLRNKRETK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 AALREKTSLSANNATLEKQLIELTRTNELLKSKFSENGNQKNLRILSLELMKLRNKRETK 40 50 60 70 80 90 190 200 210 220 230 240 pF1KE2 MRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSIEKEKIDEKSETEKLLEYIEEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 MRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSIEKEKIDEKSETEKLLEYIEEI 100 110 120 130 140 150 250 260 270 280 290 300 pF1KE2 SCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKEK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 SCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLLEKEK 160 170 180 190 200 210 310 320 330 340 350 360 pF1KE2 EDHVNRNREHNENLNAEMQNLKQKFILEQQEHEKLQQKELQIDSLLQQEKELSSSLHQKL :::::::::::::::::::::::::::::::.:::::::::::::::::::::::::::: CCDS47 EDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQKELQIDSLLQQEKELSSSLHQKL 220 230 240 250 260 270 370 380 390 400 410 420 pF1KE2 CSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEKL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 CSFQEEMVKEKNLFEEELKQTLDELDKLQQKEEQAERLVKQLEEEAKSRAEELKLLEEKL 280 290 300 310 320 330 430 440 450 460 470 480 pF1KE2 KGKEAELEKSSAAHTQATLLLQEKYDSMVQSLEDVTAQFESYKALTASEIEDLKLENSSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 KGKEAELEKSSAAHTQATLLLQEKYDSMVQSLEDVTAQFESYKALTASEIEDLKLENSSL 340 350 360 370 380 390 490 500 510 520 530 540 pF1KE2 QEKAAKAGKNAEDVQHQILATESSNQEYVRMLLDLQTKSALKETEIKEITVSFLQKITDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 QEKAAKAGKNAEDVQHQILATESSNQEYVRMLLDLQTKSALKETEIKEITVSFLQKITDL 400 410 420 430 440 450 550 560 570 580 590 600 pF1KE2 QNQLKQQEEDFRKQLEDEEGRKAEKENTTAELTEEINKWRLLYEELYNKTKPFQLQLDAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 QNQLKQQEEDFRKQLEDEEGRKAEKENTTAELTEEINKWRLLYEELYNKTKPFQLQLDAF 460 470 480 490 500 510 610 620 630 640 650 660 pF1KE2 EVEKQALLNEHGAAQEQLNKIRDSYAKLLGHQNLKQKIKHVVKLKDENSQLKSEVSKLRC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 EVEKQALLNEHGAAQEQLNKIRDSYAKLLGHQNLKQKIKHVVKLKDENSQLKSEVSKLRC 520 530 540 550 560 570 670 680 690 700 710 720 pF1KE2 QLAKKKQSETKLQEELNKVLGIKHFDPSKAFHHESKENFALKTPLKEGNTNCYRAPMECQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 QLAKKKQSETKLQEELNKVLGIKHFDPSKAFHHESKENFALKTPLKEGNTNCYRAPMECQ 580 590 600 610 620 630 pF1KE2 ESWK :::: CCDS47 ESWK 725 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 17:02:43 2016 done: Sun Nov 6 17:02:44 2016 Total Scan time: 3.470 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]