FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1812, 328 aa 1>>>pF1KE1812 328 - 328 aa - 328 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.5987+/-0.000379; mu= 8.7216+/- 0.023 mean_var=91.3808+/-17.771, 0's: 0 Z-trim(114.4): 56 B-trim: 33 in 1/56 Lambda= 0.134167 statistics sampled from 24209 (24262) to 24209 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.666), E-opt: 0.2 (0.284), width: 16 Scan time: 8.020 The best scores are: opt bits E(85289) NP_002178 (OMIM: 161561,614890) interleukin-12 sub ( 328) 2240 443.9 2.2e-124 NP_005746 (OMIM: 605816) interleukin-27 subunit be ( 229) 188 46.6 6e-05 XP_011525921 (OMIM: 605816) PREDICTED: interleukin ( 229) 188 46.6 6e-05 XP_016869753 (OMIM: 118946) PREDICTED: ciliary neu ( 372) 186 46.3 0.00012 XP_016869754 (OMIM: 118946) PREDICTED: ciliary neu ( 372) 186 46.3 0.00012 XP_016869752 (OMIM: 118946) PREDICTED: ciliary neu ( 372) 186 46.3 0.00012 NP_001833 (OMIM: 118946) ciliary neurotrophic fact ( 372) 186 46.3 0.00012 NP_001193940 (OMIM: 118946) ciliary neurotrophic f ( 372) 186 46.3 0.00012 NP_671693 (OMIM: 118946) ciliary neurotrophic fact ( 372) 186 46.3 0.00012 XP_016869750 (OMIM: 118946) PREDICTED: ciliary neu ( 439) 186 46.3 0.00014 XP_016869751 (OMIM: 118946) PREDICTED: ciliary neu ( 439) 186 46.3 0.00014 XP_016869749 (OMIM: 118946) PREDICTED: ciliary neu ( 439) 186 46.3 0.00014 NP_001193795 (OMIM: 147880,614689,614752) interleu ( 352) 178 44.7 0.00034 NP_852004 (OMIM: 147880,614689,614752) interleukin ( 365) 178 44.7 0.00035 XP_006711362 (OMIM: 147880,614689,614752) PREDICTE ( 381) 178 44.8 0.00036 NP_000556 (OMIM: 147880,614689,614752) interleukin ( 468) 178 44.8 0.00043 XP_006711361 (OMIM: 147880,614689,614752) PREDICTE ( 484) 178 44.8 0.00044 XP_016856689 (OMIM: 147880,614689,614752) PREDICTE ( 501) 178 44.8 0.00046 XP_016856688 (OMIM: 147880,614689,614752) PREDICTE ( 517) 178 44.8 0.00047 >>NP_002178 (OMIM: 161561,614890) interleukin-12 subunit (328 aa) initn: 2240 init1: 2240 opt: 2240 Z-score: 2353.9 bits: 443.9 E(85289): 2.2e-124 Smith-Waterman score: 2240; 100.0% identity (100.0% similar) in 328 aa overlap (1-328:1-328) 10 20 30 40 50 60 pF1KE1 MCHQQLVISWFSLVFLASPLVAIWELKKDVYVVELDWYPDAPGEMVVLTCDTPEEDGITW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 MCHQQLVISWFSLVFLASPLVAIWELKKDVYVVELDWYPDAPGEMVVLTCDTPEEDGITW 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 TLDQSSEVLGSGKTLTIQVKEFGDAGQYTCHKGGEVLSHSLLLLHKKEDGIWSTDILKDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 TLDQSSEVLGSGKTLTIQVKEFGDAGQYTCHKGGEVLSHSLLLLHKKEDGIWSTDILKDQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 KEPKNKTFLRCEAKNYSGRFTCWWLTTISTDLTFSVKSSRGSSDPQGVTCGAATLSAERV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 KEPKNKTFLRCEAKNYSGRFTCWWLTTISTDLTFSVKSSRGSSDPQGVTCGAATLSAERV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 RGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYENYTSSFFIRDIIKPDPPKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 RGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYENYTSSFFIRDIIKPDPPKN 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 LQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFTDKTSATVIC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_002 LQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFTDKTSATVIC 250 260 270 280 290 300 310 320 pF1KE1 RKNASISVRAQDRYYSSSWSEWASVPCS :::::::::::::::::::::::::::: NP_002 RKNASISVRAQDRYYSSSWSEWASVPCS 310 320 >>NP_005746 (OMIM: 605816) interleukin-27 subunit beta p (229 aa) initn: 173 init1: 93 opt: 188 Z-score: 209.8 bits: 46.6 E(85289): 6e-05 Smith-Waterman score: 188; 26.6% identity (55.3% similar) in 188 aa overlap (148-328:42-222) 120 130 140 150 160 170 pF1KE1 KDQKEPKNKTFLRCEAKNYSGRFTCWWLTTISTDLTFSVKSSRGSSDPQGVTCGAATLSA :..: .... . .:..: :. :. . NP_005 WASCPPCSGRKGPPAALTLPRVQCRASRYPIAVDCSWTLPPAPNSTSP--VSFIATYRLG 20 30 40 50 60 180 190 200 210 220 230 pF1KE1 ERVRGDNKEYEYSVECQEDSACPAAEESL----PIEVMVDAVHKLKYENYTSSFFIRDII .:: . . . ...: .. .: : . : ::: . :. . :: NP_005 MAARGHS--WPCLQQTPTSTSCTITDVQLFSMAPYVLNVTAVHPWGSSSSFVPFITEHII 70 80 90 100 110 120 240 250 260 270 280 290 pF1KE1 KPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQV--QGKSKREKKDRVF- :::::....:.:: . ::..:.:: : .: :. ::: . .. :: .. .. . NP_005 KPDPPEGVRLSPLAE-RQLQVQWEPPGSWPFPE-IFSLKYWIRYKRQGAARFHRVGPIEA 130 140 150 160 170 180 300 310 320 pF1KE1 TDKTSATVICRKNASISVRAQDRYYSSSWSEWASVPCS :. .: : ..: ::: . :.: :.: . NP_005 TSFILRAVRPRARYYVQVAAQDLTDYGELSDW-SLPATATMSLGK 190 200 210 220 >>XP_011525921 (OMIM: 605816) PREDICTED: interleukin-27 (229 aa) initn: 173 init1: 93 opt: 188 Z-score: 209.8 bits: 46.6 E(85289): 6e-05 Smith-Waterman score: 188; 26.6% identity (55.3% similar) in 188 aa overlap (148-328:42-222) 120 130 140 150 160 170 pF1KE1 KDQKEPKNKTFLRCEAKNYSGRFTCWWLTTISTDLTFSVKSSRGSSDPQGVTCGAATLSA :..: .... . .:..: :. :. . XP_011 WASCPPCSGRKGPPAALTLPRVQCRASRYPIAVDCSWTLPPAPNSTSP--VSFIATYRLG 20 30 40 50 60 180 190 200 210 220 230 pF1KE1 ERVRGDNKEYEYSVECQEDSACPAAEESL----PIEVMVDAVHKLKYENYTSSFFIRDII .:: . . . ...: .. .: : . : ::: . :. . :: XP_011 MAARGHS--WPCLQQTPTSTSCTITDVQLFSMAPYVLNVTAVHPWGSSSSFVPFITEHII 70 80 90 100 110 120 240 250 260 270 280 290 pF1KE1 KPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQV--QGKSKREKKDRVF- :::::....:.:: . ::..:.:: : .: :. ::: . .. :: .. .. . XP_011 KPDPPEGVRLSPLAE-RQLQVQWEPPGSWPFPE-IFSLKYWIRYKRQGAARFHRVGPIEA 130 140 150 160 170 180 300 310 320 pF1KE1 TDKTSATVICRKNASISVRAQDRYYSSSWSEWASVPCS :. .: : ..: ::: . :.: :.: . XP_011 TSFILRAVRPRARYYVQVAAQDLTDYGELSDW-SLPATATMSLGK 190 200 210 220 >>XP_016869753 (OMIM: 118946) PREDICTED: ciliary neurotr (372 aa) initn: 138 init1: 75 opt: 186 Z-score: 204.4 bits: 46.3 E(85289): 0.00012 Smith-Waterman score: 253; 23.9% identity (51.2% similar) in 326 aa overlap (8-323:5-294) 10 20 30 40 50 pF1KE1 MCHQQLVISWFSLVFLASPLVAIWELKKDVYVVELDWYPDAPGEMVVLTCDTPEEDG-IT . : . ::. .... ... . : . : :.: : : . :. .: XP_016 MAAPVPWACCAVLAAAAAVVYAQRHSPQEAPHVQY-ERLGSDVTLPCGTANWDAAVT 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 WTLDQSSEV--LGSGKTLTIQVKEFGDAGQYTC-HKGGEVLSHSLLLLHKKEDGIWSTDI : .. .. . : .:. :... :.: .: :.: :. . : :..:: : :. XP_016 WRVNGTDLAPDLLNGSQLVLHGLELGHSGLYACFHRDSWHLRHQVLL-HV---GL----- 60 70 80 90 100 120 130 140 150 160 170 pF1KE1 LKDQKEPKNKTFLRCEAKNYSGRFTCWWLTTISTDL--TFSVKSSRGSSDPQGVTCGAAT : . : :....: : : : : . ::.: .:: . ..: XP_016 ------PPREPVLSCRSNTYPKGFYCSWHLPTPTYIPNTFNVTVLHGS---KIMVC---- 110 120 130 140 150 180 190 200 210 220 230 pF1KE1 LSAERVRGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYENYTSSFFIRDIIK .:. . .:. .. .: ... . : .. . .: :.: XP_016 ---------EKDPALKNRCHIRYM--HLFSTIKYKVSISVSNALGHNATAITFDEFTIVK 160 170 180 190 200 240 250 260 270 280 290 pF1KE1 PDPPKNLQLKPL-KNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFTDK ::::.:. .:. .: :..::.:. :.:: :.: : : : .. . . . ..: XP_016 PDPPENVVARPVPSNPRRLEVTWQTPSTWPDPES-FPLKFFLRYRPLILDQWQHVELSDG 210 220 230 240 250 260 300 310 320 pF1KE1 TSATVI---CRKNASISVRAQDRYYSSSWSEWASVPCS :. :. :. :.: :.: .. ::.:. XP_016 TAHTITDAYAGKEYIIQVAAKDNEIGT-WSDWSVAAHATPWTEEPRHLTTEAQAAETTTS 270 280 290 300 310 320 XP_016 TTSSLAPPPTTKICDPGELGSGGGPSAPFLVSVPITLALAAAAATASSLLI 330 340 350 360 370 >>XP_016869754 (OMIM: 118946) PREDICTED: ciliary neurotr (372 aa) initn: 138 init1: 75 opt: 186 Z-score: 204.4 bits: 46.3 E(85289): 0.00012 Smith-Waterman score: 253; 23.9% identity (51.2% similar) in 326 aa overlap (8-323:5-294) 10 20 30 40 50 pF1KE1 MCHQQLVISWFSLVFLASPLVAIWELKKDVYVVELDWYPDAPGEMVVLTCDTPEEDG-IT . : . ::. .... ... . : . : :.: : : . :. .: XP_016 MAAPVPWACCAVLAAAAAVVYAQRHSPQEAPHVQY-ERLGSDVTLPCGTANWDAAVT 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 WTLDQSSEV--LGSGKTLTIQVKEFGDAGQYTC-HKGGEVLSHSLLLLHKKEDGIWSTDI : .. .. . : .:. :... :.: .: :.: :. . : :..:: : :. XP_016 WRVNGTDLAPDLLNGSQLVLHGLELGHSGLYACFHRDSWHLRHQVLL-HV---GL----- 60 70 80 90 100 120 130 140 150 160 170 pF1KE1 LKDQKEPKNKTFLRCEAKNYSGRFTCWWLTTISTDL--TFSVKSSRGSSDPQGVTCGAAT : . : :....: : : : : . ::.: .:: . ..: XP_016 ------PPREPVLSCRSNTYPKGFYCSWHLPTPTYIPNTFNVTVLHGS---KIMVC---- 110 120 130 140 150 180 190 200 210 220 230 pF1KE1 LSAERVRGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYENYTSSFFIRDIIK .:. . .:. .. .: ... . : .. . .: :.: XP_016 ---------EKDPALKNRCHIRYM--HLFSTIKYKVSISVSNALGHNATAITFDEFTIVK 160 170 180 190 200 240 250 260 270 280 290 pF1KE1 PDPPKNLQLKPL-KNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFTDK ::::.:. .:. .: :..::.:. :.:: :.: : : : .. . . . ..: XP_016 PDPPENVVARPVPSNPRRLEVTWQTPSTWPDPES-FPLKFFLRYRPLILDQWQHVELSDG 210 220 230 240 250 260 300 310 320 pF1KE1 TSATVI---CRKNASISVRAQDRYYSSSWSEWASVPCS :. :. :. :.: :.: .. ::.:. XP_016 TAHTITDAYAGKEYIIQVAAKDNEIGT-WSDWSVAAHATPWTEEPRHLTTEAQAAETTTS 270 280 290 300 310 320 XP_016 TTSSLAPPPTTKICDPGELGSGGGPSAPFLVSVPITLALAAAAATASSLLI 330 340 350 360 370 >>XP_016869752 (OMIM: 118946) PREDICTED: ciliary neurotr (372 aa) initn: 138 init1: 75 opt: 186 Z-score: 204.4 bits: 46.3 E(85289): 0.00012 Smith-Waterman score: 253; 23.9% identity (51.2% similar) in 326 aa overlap (8-323:5-294) 10 20 30 40 50 pF1KE1 MCHQQLVISWFSLVFLASPLVAIWELKKDVYVVELDWYPDAPGEMVVLTCDTPEEDG-IT . : . ::. .... ... . : . : :.: : : . :. .: XP_016 MAAPVPWACCAVLAAAAAVVYAQRHSPQEAPHVQY-ERLGSDVTLPCGTANWDAAVT 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 WTLDQSSEV--LGSGKTLTIQVKEFGDAGQYTC-HKGGEVLSHSLLLLHKKEDGIWSTDI : .. .. . : .:. :... :.: .: :.: :. . : :..:: : :. XP_016 WRVNGTDLAPDLLNGSQLVLHGLELGHSGLYACFHRDSWHLRHQVLL-HV---GL----- 60 70 80 90 100 120 130 140 150 160 170 pF1KE1 LKDQKEPKNKTFLRCEAKNYSGRFTCWWLTTISTDL--TFSVKSSRGSSDPQGVTCGAAT : . : :....: : : : : . ::.: .:: . ..: XP_016 ------PPREPVLSCRSNTYPKGFYCSWHLPTPTYIPNTFNVTVLHGS---KIMVC---- 110 120 130 140 150 180 190 200 210 220 230 pF1KE1 LSAERVRGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYENYTSSFFIRDIIK .:. . .:. .. .: ... . : .. . .: :.: XP_016 ---------EKDPALKNRCHIRYM--HLFSTIKYKVSISVSNALGHNATAITFDEFTIVK 160 170 180 190 200 240 250 260 270 280 290 pF1KE1 PDPPKNLQLKPL-KNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFTDK ::::.:. .:. .: :..::.:. :.:: :.: : : : .. . . . ..: XP_016 PDPPENVVARPVPSNPRRLEVTWQTPSTWPDPES-FPLKFFLRYRPLILDQWQHVELSDG 210 220 230 240 250 260 300 310 320 pF1KE1 TSATVI---CRKNASISVRAQDRYYSSSWSEWASVPCS :. :. :. :.: :.: .. ::.:. XP_016 TAHTITDAYAGKEYIIQVAAKDNEIGT-WSDWSVAAHATPWTEEPRHLTTEAQAAETTTS 270 280 290 300 310 320 XP_016 TTSSLAPPPTTKICDPGELGSGGGPSAPFLVSVPITLALAAAAATASSLLI 330 340 350 360 370 >>NP_001833 (OMIM: 118946) ciliary neurotrophic factor r (372 aa) initn: 138 init1: 75 opt: 186 Z-score: 204.4 bits: 46.3 E(85289): 0.00012 Smith-Waterman score: 253; 23.9% identity (51.2% similar) in 326 aa overlap (8-323:5-294) 10 20 30 40 50 pF1KE1 MCHQQLVISWFSLVFLASPLVAIWELKKDVYVVELDWYPDAPGEMVVLTCDTPEEDG-IT . : . ::. .... ... . : . : :.: : : . :. .: NP_001 MAAPVPWACCAVLAAAAAVVYAQRHSPQEAPHVQY-ERLGSDVTLPCGTANWDAAVT 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 WTLDQSSEV--LGSGKTLTIQVKEFGDAGQYTC-HKGGEVLSHSLLLLHKKEDGIWSTDI : .. .. . : .:. :... :.: .: :.: :. . : :..:: : :. NP_001 WRVNGTDLAPDLLNGSQLVLHGLELGHSGLYACFHRDSWHLRHQVLL-HV---GL----- 60 70 80 90 100 120 130 140 150 160 170 pF1KE1 LKDQKEPKNKTFLRCEAKNYSGRFTCWWLTTISTDL--TFSVKSSRGSSDPQGVTCGAAT : . : :....: : : : : . ::.: .:: . ..: NP_001 ------PPREPVLSCRSNTYPKGFYCSWHLPTPTYIPNTFNVTVLHGS---KIMVC---- 110 120 130 140 150 180 190 200 210 220 230 pF1KE1 LSAERVRGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYENYTSSFFIRDIIK .:. . .:. .. .: ... . : .. . .: :.: NP_001 ---------EKDPALKNRCHIRYM--HLFSTIKYKVSISVSNALGHNATAITFDEFTIVK 160 170 180 190 200 240 250 260 270 280 290 pF1KE1 PDPPKNLQLKPL-KNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFTDK ::::.:. .:. .: :..::.:. :.:: :.: : : : .. . . . ..: NP_001 PDPPENVVARPVPSNPRRLEVTWQTPSTWPDPES-FPLKFFLRYRPLILDQWQHVELSDG 210 220 230 240 250 260 300 310 320 pF1KE1 TSATVI---CRKNASISVRAQDRYYSSSWSEWASVPCS :. :. :. :.: :.: .. ::.:. NP_001 TAHTITDAYAGKEYIIQVAAKDNEIGT-WSDWSVAAHATPWTEEPRHLTTEAQAAETTTS 270 280 290 300 310 320 NP_001 TTSSLAPPPTTKICDPGELGSGGGPSAPFLVSVPITLALAAAAATASSLLI 330 340 350 360 370 >>NP_001193940 (OMIM: 118946) ciliary neurotrophic facto (372 aa) initn: 138 init1: 75 opt: 186 Z-score: 204.4 bits: 46.3 E(85289): 0.00012 Smith-Waterman score: 253; 23.9% identity (51.2% similar) in 326 aa overlap (8-323:5-294) 10 20 30 40 50 pF1KE1 MCHQQLVISWFSLVFLASPLVAIWELKKDVYVVELDWYPDAPGEMVVLTCDTPEEDG-IT . : . ::. .... ... . : . : :.: : : . :. .: NP_001 MAAPVPWACCAVLAAAAAVVYAQRHSPQEAPHVQY-ERLGSDVTLPCGTANWDAAVT 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 WTLDQSSEV--LGSGKTLTIQVKEFGDAGQYTC-HKGGEVLSHSLLLLHKKEDGIWSTDI : .. .. . : .:. :... :.: .: :.: :. . : :..:: : :. NP_001 WRVNGTDLAPDLLNGSQLVLHGLELGHSGLYACFHRDSWHLRHQVLL-HV---GL----- 60 70 80 90 100 120 130 140 150 160 170 pF1KE1 LKDQKEPKNKTFLRCEAKNYSGRFTCWWLTTISTDL--TFSVKSSRGSSDPQGVTCGAAT : . : :....: : : : : . ::.: .:: . ..: NP_001 ------PPREPVLSCRSNTYPKGFYCSWHLPTPTYIPNTFNVTVLHGS---KIMVC---- 110 120 130 140 150 180 190 200 210 220 230 pF1KE1 LSAERVRGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYENYTSSFFIRDIIK .:. . .:. .. .: ... . : .. . .: :.: NP_001 ---------EKDPALKNRCHIRYM--HLFSTIKYKVSISVSNALGHNATAITFDEFTIVK 160 170 180 190 200 240 250 260 270 280 290 pF1KE1 PDPPKNLQLKPL-KNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFTDK ::::.:. .:. .: :..::.:. :.:: :.: : : : .. . . . ..: NP_001 PDPPENVVARPVPSNPRRLEVTWQTPSTWPDPES-FPLKFFLRYRPLILDQWQHVELSDG 210 220 230 240 250 260 300 310 320 pF1KE1 TSATVI---CRKNASISVRAQDRYYSSSWSEWASVPCS :. :. :. :.: :.: .. ::.:. NP_001 TAHTITDAYAGKEYIIQVAAKDNEIGT-WSDWSVAAHATPWTEEPRHLTTEAQAAETTTS 270 280 290 300 310 320 NP_001 TTSSLAPPPTTKICDPGELGSGGGPSAPFLVSVPITLALAAAAATASSLLI 330 340 350 360 370 >>NP_671693 (OMIM: 118946) ciliary neurotrophic factor r (372 aa) initn: 138 init1: 75 opt: 186 Z-score: 204.4 bits: 46.3 E(85289): 0.00012 Smith-Waterman score: 253; 23.9% identity (51.2% similar) in 326 aa overlap (8-323:5-294) 10 20 30 40 50 pF1KE1 MCHQQLVISWFSLVFLASPLVAIWELKKDVYVVELDWYPDAPGEMVVLTCDTPEEDG-IT . : . ::. .... ... . : . : :.: : : . :. .: NP_671 MAAPVPWACCAVLAAAAAVVYAQRHSPQEAPHVQY-ERLGSDVTLPCGTANWDAAVT 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 WTLDQSSEV--LGSGKTLTIQVKEFGDAGQYTC-HKGGEVLSHSLLLLHKKEDGIWSTDI : .. .. . : .:. :... :.: .: :.: :. . : :..:: : :. NP_671 WRVNGTDLAPDLLNGSQLVLHGLELGHSGLYACFHRDSWHLRHQVLL-HV---GL----- 60 70 80 90 100 120 130 140 150 160 170 pF1KE1 LKDQKEPKNKTFLRCEAKNYSGRFTCWWLTTISTDL--TFSVKSSRGSSDPQGVTCGAAT : . : :....: : : : : . ::.: .:: . ..: NP_671 ------PPREPVLSCRSNTYPKGFYCSWHLPTPTYIPNTFNVTVLHGS---KIMVC---- 110 120 130 140 150 180 190 200 210 220 230 pF1KE1 LSAERVRGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYENYTSSFFIRDIIK .:. . .:. .. .: ... . : .. . .: :.: NP_671 ---------EKDPALKNRCHIRYM--HLFSTIKYKVSISVSNALGHNATAITFDEFTIVK 160 170 180 190 200 240 250 260 270 280 290 pF1KE1 PDPPKNLQLKPL-KNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFTDK ::::.:. .:. .: :..::.:. :.:: :.: : : : .. . . . ..: NP_671 PDPPENVVARPVPSNPRRLEVTWQTPSTWPDPES-FPLKFFLRYRPLILDQWQHVELSDG 210 220 230 240 250 260 300 310 320 pF1KE1 TSATVI---CRKNASISVRAQDRYYSSSWSEWASVPCS :. :. :. :.: :.: .. ::.:. NP_671 TAHTITDAYAGKEYIIQVAAKDNEIGT-WSDWSVAAHATPWTEEPRHLTTEAQAAETTTS 270 280 290 300 310 320 NP_671 TTSSLAPPPTTKICDPGELGSGGGPSAPFLVSVPITLALAAAAATASSLLI 330 340 350 360 370 >>XP_016869750 (OMIM: 118946) PREDICTED: ciliary neurotr (439 aa) initn: 138 init1: 75 opt: 186 Z-score: 203.3 bits: 46.3 E(85289): 0.00014 Smith-Waterman score: 253; 23.9% identity (51.2% similar) in 326 aa overlap (8-323:72-361) 10 20 30 pF1KE1 MCHQQLVISWFSLVFLASPLVAIWELKKDVYVVELDW . : . ::. .... ... . XP_016 RLRVYSSSDGGGAAGSKDTLGLSSSVMAAPVPWACCAVLAAAAAVVYAQRHSPQEAPHVQ 50 60 70 80 90 100 40 50 60 70 80 90 pF1KE1 YPDAPGEMVVLTCDTPEEDG-ITWTLDQSSEV--LGSGKTLTIQVKEFGDAGQYTC-HKG : . : :.: : : . :. .:: .. .. . : .:. :... :.: .: :.: :. XP_016 Y-ERLGSDVTLPCGTANWDAAVTWRVNGTDLAPDLLNGSQLVLHGLELGHSGLYACFHRD 110 120 130 140 150 160 100 110 120 130 140 150 pF1KE1 GEVLSHSLLLLHKKEDGIWSTDILKDQKEPKNKTFLRCEAKNYSGRFTCWWLTTISTDL- . : :..:: : :. : . : :....: : : : : . XP_016 SWHLRHQVLL-HV---GL-----------PPREPVLSCRSNTYPKGFYCSWHLPTPTYIP 170 180 190 200 160 170 180 190 200 210 pF1KE1 -TFSVKSSRGSSDPQGVTCGAATLSAERVRGDNKEYEYSVECQEDSACPAAEESLPIEVM ::.: .:: . ..: .:. . .:. .. .: XP_016 NTFNVTVLHGS---KIMVC-------------EKDPALKNRCHIRYM--HLFSTIKYKVS 210 220 230 240 220 230 240 250 260 270 pF1KE1 VDAVHKLKYENYTSSFFIRDIIKPDPPKNLQLKPL-KNSRQVEVSWEYPDTWSTPHSYFS ... . : .. . .: :.:::::.:. .:. .: :..::.:. :.:: :.: : XP_016 ISVSNALGHNATAITFDEFTIVKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPES-FP 250 260 270 280 290 300 280 290 300 310 320 pF1KE1 LTFCVQVQGKSKREKKDRVFTDKTSATVI---CRKNASISVRAQDRYYSSSWSEWASVPC : : .. . . . ..: :. :. :. :.: :.: .. ::.:. XP_016 LKFFLRYRPLILDQWQHVELSDGTAHTITDAYAGKEYIIQVAAKDNEIGT-WSDWSVAAH 310 320 330 340 350 360 pF1KE1 S XP_016 ATPWTEEPRHLTTEAQAAETTTSTTSSLAPPPTTKICDPGELGSGGGPSAPFLVSVPITL 370 380 390 400 410 420 328 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 17:04:03 2016 done: Sun Nov 6 17:04:04 2016 Total Scan time: 8.020 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]