FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1812, 328 aa 1>>>pF1KE1812 328 - 328 aa - 328 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.5161+/-0.000844; mu= 9.3396+/- 0.050 mean_var=81.3677+/-15.874, 0's: 0 Z-trim(107.3): 34 B-trim: 2 in 1/52 Lambda= 0.142183 statistics sampled from 9469 (9492) to 9469 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.676), E-opt: 0.2 (0.292), width: 16 Scan time: 2.660 The best scores are: opt bits E(32554) CCDS4346.1 IL12B gene_id:3593|Hs108|chr5 ( 328) 2240 469.2 2.1e-132 >>CCDS4346.1 IL12B gene_id:3593|Hs108|chr5 (328 aa) initn: 2240 init1: 2240 opt: 2240 Z-score: 2490.7 bits: 469.2 E(32554): 2.1e-132 Smith-Waterman score: 2240; 100.0% identity (100.0% similar) in 328 aa overlap (1-328:1-328) 10 20 30 40 50 60 pF1KE1 MCHQQLVISWFSLVFLASPLVAIWELKKDVYVVELDWYPDAPGEMVVLTCDTPEEDGITW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MCHQQLVISWFSLVFLASPLVAIWELKKDVYVVELDWYPDAPGEMVVLTCDTPEEDGITW 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE1 TLDQSSEVLGSGKTLTIQVKEFGDAGQYTCHKGGEVLSHSLLLLHKKEDGIWSTDILKDQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 TLDQSSEVLGSGKTLTIQVKEFGDAGQYTCHKGGEVLSHSLLLLHKKEDGIWSTDILKDQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE1 KEPKNKTFLRCEAKNYSGRFTCWWLTTISTDLTFSVKSSRGSSDPQGVTCGAATLSAERV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KEPKNKTFLRCEAKNYSGRFTCWWLTTISTDLTFSVKSSRGSSDPQGVTCGAATLSAERV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE1 RGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYENYTSSFFIRDIIKPDPPKN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 RGDNKEYEYSVECQEDSACPAAEESLPIEVMVDAVHKLKYENYTSSFFIRDIIKPDPPKN 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE1 LQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFTDKTSATVIC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSKREKKDRVFTDKTSATVIC 250 260 270 280 290 300 310 320 pF1KE1 RKNASISVRAQDRYYSSSWSEWASVPCS :::::::::::::::::::::::::::: CCDS43 RKNASISVRAQDRYYSSSWSEWASVPCS 310 320 328 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 17:04:02 2016 done: Sun Nov 6 17:04:02 2016 Total Scan time: 2.660 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]