FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5359, 307 aa 1>>>pF1KE5359 307 - 307 aa - 307 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3049+/-0.000413; mu= 15.2229+/- 0.026 mean_var=70.8822+/-14.250, 0's: 0 Z-trim(110.7): 265 B-trim: 1131 in 1/51 Lambda= 0.152337 statistics sampled from 18872 (19164) to 18872 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.596), E-opt: 0.2 (0.225), width: 16 Scan time: 5.490 The best scores are: opt bits E(85289) NP_068605 (OMIM: 113730,601665) mitochondrial brow ( 307) 1997 448.4 8.5e-126 XP_005263263 (OMIM: 113730,601665) PREDICTED: mito ( 306) 1980 444.6 1.1e-124 XP_011530530 (OMIM: 113730,601665) PREDICTED: mito ( 277) 1757 395.6 5.9e-110 NP_003346 (OMIM: 601693,607447) mitochondrial unco ( 309) 1191 271.2 1.8e-72 NP_003347 (OMIM: 601665,602044) mitochondrial unco ( 312) 1182 269.3 7.2e-72 NP_073714 (OMIM: 601665,602044) mitochondrial unco ( 275) 1035 236.9 3.4e-62 NP_001269127 (OMIM: 300242) brain mitochondrial ca ( 290) 597 140.7 3.4e-33 NP_001269125 (OMIM: 300242) brain mitochondrial ca ( 322) 597 140.7 3.7e-33 NP_001269124 (OMIM: 300242) brain mitochondrial ca ( 325) 597 140.7 3.7e-33 XP_011529704 (OMIM: 300242) PREDICTED: brain mitoc ( 334) 597 140.7 3.8e-33 NP_001010875 (OMIM: 610793) kidney mitochondrial c ( 291) 594 140.0 5.4e-33 XP_016876013 (OMIM: 610793) PREDICTED: kidney mito ( 291) 594 140.0 5.4e-33 NP_003553 (OMIM: 604165) mitochondrial 2-oxoglutar ( 314) 586 138.3 1.9e-32 XP_016885425 (OMIM: 300242) PREDICTED: brain mitoc ( 306) 571 135.0 1.9e-31 XP_016885428 (OMIM: 300242) PREDICTED: brain mitoc ( 338) 571 135.0 2e-31 XP_016885427 (OMIM: 300242) PREDICTED: brain mitoc ( 341) 571 135.0 2e-31 XP_016885426 (OMIM: 300242) PREDICTED: brain mitoc ( 350) 571 135.0 2.1e-31 NP_001158889 (OMIM: 604165) mitochondrial 2-oxoglu ( 303) 565 133.7 4.6e-31 NP_036272 (OMIM: 606794) mitochondrial dicarboxyla ( 287) 562 133.0 7e-31 NP_004268 (OMIM: 613725) mitochondrial uncoupling ( 323) 507 120.9 3.3e-27 XP_016879709 (OMIM: 606794) PREDICTED: mitochondri ( 244) 503 120.0 4.9e-27 NP_001273735 (OMIM: 610793) kidney mitochondrial c ( 240) 488 116.7 4.8e-26 NP_001158890 (OMIM: 604165) mitochondrial 2-oxoglu ( 263) 475 113.8 3.7e-25 NP_001190980 (OMIM: 613725) mitochondrial uncoupli ( 300) 465 111.7 1.9e-24 XP_005249540 (OMIM: 613725) PREDICTED: mitochondri ( 310) 465 111.7 1.9e-24 XP_005262546 (OMIM: 300242) PREDICTED: brain mitoc ( 224) 453 109.0 9.3e-24 XP_005266379 (OMIM: 610793) PREDICTED: kidney mito ( 254) 453 109.0 1e-23 XP_006719856 (OMIM: 610793) PREDICTED: kidney mito ( 293) 453 109.0 1.2e-23 XP_005266378 (OMIM: 610793) PREDICTED: kidney mito ( 293) 453 109.0 1.2e-23 XP_016876012 (OMIM: 610793) PREDICTED: kidney mito ( 293) 453 109.0 1.2e-23 XP_006719857 (OMIM: 610793) PREDICTED: kidney mito ( 293) 453 109.0 1.2e-23 NP_001273736 (OMIM: 610793) kidney mitochondrial c ( 216) 448 107.9 1.9e-23 XP_011533329 (OMIM: 610793) PREDICTED: kidney mito ( 216) 448 107.9 1.9e-23 XP_016885429 (OMIM: 300242) PREDICTED: brain mitoc ( 240) 427 103.3 5.2e-22 NP_001257817 (OMIM: 606794) mitochondrial dicarbox ( 296) 420 101.8 1.8e-21 XP_016867001 (OMIM: 613725) PREDICTED: mitochondri ( 195) 392 95.5 9e-20 XP_016885431 (OMIM: 300242) PREDICTED: brain mitoc ( 197) 383 93.5 3.6e-19 XP_016885430 (OMIM: 300242) PREDICTED: brain mitoc ( 197) 383 93.5 3.6e-19 NP_997231 (OMIM: 610817) solute carrier family 25 ( 304) 385 94.1 3.8e-19 NP_005975 (OMIM: 190315,615182) tricarboxylate tra ( 311) 372 91.2 2.8e-18 NP_001243463 (OMIM: 190315,615182) tricarboxylate ( 318) 361 88.8 1.5e-17 XP_011510372 (OMIM: 603667,612949) PREDICTED: calc ( 587) 355 87.7 6.2e-17 NP_003696 (OMIM: 603667,612949) calcium-binding mi ( 678) 355 87.7 6.9e-17 XP_016885432 (OMIM: 300242) PREDICTED: brain mitoc ( 157) 345 85.1 9.7e-17 NP_000378 (OMIM: 212138,613698) mitochondrial carn ( 301) 345 85.3 1.6e-16 XP_011522148 (OMIM: 610818) PREDICTED: solute carr ( 291) 343 84.9 2.2e-16 NP_958928 (OMIM: 610818) solute carrier family 25 ( 295) 343 84.9 2.2e-16 NP_001307800 (OMIM: 610818) solute carrier family ( 295) 343 84.9 2.2e-16 NP_001307801 (OMIM: 610818) solute carrier family ( 295) 343 84.9 2.2e-16 NP_001307799 (OMIM: 610818) solute carrier family ( 300) 343 84.9 2.2e-16 >>NP_068605 (OMIM: 113730,601665) mitochondrial brown fa (307 aa) initn: 1997 init1: 1997 opt: 1997 Z-score: 2379.4 bits: 448.4 E(85289): 8.5e-126 Smith-Waterman score: 1997; 100.0% identity (100.0% similar) in 307 aa overlap (1-307:1-307) 10 20 30 40 50 60 pF1KE5 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTSSVIRYKGVLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTSSVIRYKGVLG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 TITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKILAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 TITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKILAG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 LTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTEGLTGLWKGTTPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 LTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTEGLTGLWKGTTPN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 LMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDVVKTRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 LMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDVVKTRF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 INSPPGQYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLKRELSKSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_068 INSPPGQYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLKRELSKSR 250 260 270 280 290 300 pF1KE5 QTMDCAT ::::::: NP_068 QTMDCAT >>XP_005263263 (OMIM: 113730,601665) PREDICTED: mitochon (306 aa) initn: 1978 init1: 1305 opt: 1980 Z-score: 2359.3 bits: 444.6 E(85289): 1.1e-124 Smith-Waterman score: 1980; 99.7% identity (99.7% similar) in 307 aa overlap (1-307:1-306) 10 20 30 40 50 60 pF1KE5 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTSSVIRYKGVLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTSSVIRYKGVLG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 TITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKILAG ::::::::::::::::::::::::::::::::::::::::::::::::: :::::::::: XP_005 TITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKET-PSLGSKILAG 70 80 90 100 110 130 140 150 160 170 180 pF1KE5 LTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTEGLTGLWKGTTPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTEGLTGLWKGTTPN 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE5 LMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDVVKTRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 LMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDVVKTRF 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE5 INSPPGQYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLKRELSKSR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 INSPPGQYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLKRELSKSR 240 250 260 270 280 290 pF1KE5 QTMDCAT ::::::: XP_005 QTMDCAT 300 >>XP_011530530 (OMIM: 113730,601665) PREDICTED: mitochon (277 aa) initn: 1905 init1: 1757 opt: 1757 Z-score: 2095.0 bits: 395.6 E(85289): 5.9e-110 Smith-Waterman score: 1757; 99.3% identity (99.6% similar) in 273 aa overlap (1-273:1-273) 10 20 30 40 50 60 pF1KE5 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTSSVIRYKGVLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTSSVIRYKGVLG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 TITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKILAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 TITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKILAG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 LTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTEGLTGLWKGTTPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTEGLTGLWKGTTPN 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 LMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDVVKTRF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDVVKTRF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 INSPPGQYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLKRELSKSR :::::::::::::::::::::::::::::: .: XP_011 INSPPGQYKSVPNCAMKVFTNEGPTAFFKGKIPHIGK 250 260 270 pF1KE5 QTMDCAT >>NP_003346 (OMIM: 601693,607447) mitochondrial uncoupli (309 aa) initn: 1221 init1: 656 opt: 1191 Z-score: 1422.1 bits: 271.2 E(85289): 1.8e-72 Smith-Waterman score: 1191; 59.7% identity (85.0% similar) in 300 aa overlap (1-296:1-298) 10 20 30 40 50 pF1KE5 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGEC--PT--SSVIRYK : :. :.:: :: :....:: :::.::.:::::::::::::.::: :. .. .:. NP_003 MVGFKATDVPPTATVKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGPVRATASAQYR 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE5 GVLGTITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSK ::.::: ..:.::: .::.:: ::::::.: ::.::::::.:..: : :.: : :.::. NP_003 GVMGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTKGSEHA-SIGSR 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 ILAGLTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTEGLTGLWKG .::: :::..:: ..:::.:::::.:::.. : . :: .: :::. :: ::. ::::: NP_003 LLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGR-RYQSTVNAYKTIAREEGFRGLWKG 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE5 TTPNLMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDVV :.::. :..:.::.:::::::.:.:..: :...::.:::..::. ::::.:...:::::: NP_003 TSPNVARNAIVNCAELVTYDLIKDALLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVV 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE5 KTRFINSPPGQYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLKREL :::..:: :::.:. .::. .. .::: ::.::..:::::::::::.::: .::::: : NP_003 KTRYMNSALGQYSSAGHCALTMLQKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRAL 240 250 260 270 280 290 300 pF1KE5 SKSRQTMDCAT NP_003 MAACTSREAPF 300 >>NP_003347 (OMIM: 601665,602044) mitochondrial uncoupli (312 aa) initn: 1178 init1: 662 opt: 1182 Z-score: 1411.3 bits: 269.3 E(85289): 7.2e-72 Smith-Waterman score: 1182; 58.7% identity (81.8% similar) in 303 aa overlap (1-298:1-303) 10 20 30 40 50 pF1KE5 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGE---CPTSSVIRYKG : :: ::: ::..:....:: :::.::..::::::::::::.::: :. ...:.: NP_003 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAVQTARLVQYRG 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE5 VLGTITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKI ::::: ..:.::: . :.:: ::::::.: ::.::::::.:.. : :: ..: NP_003 VLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSSLTTRI 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE5 LAGLTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKP--RYTGTYNAYRIIATTEGLTGLWK ::: :::..:: .:::.:::::.::. :: . .:.::..::: :: ::. :::: NP_003 LAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLWK 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE5 GTTPNLMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDV :: ::.::..:.::.:.::::..:: .. ..:.:. :::.:::. ::::::...::::: NP_003 GTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDV 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE5 VKTRFINSPPGQYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLKRE ::::..::::::: : .: .:. ..::::::.::..:::::::::::.::: .::::: NP_003 VKTRYMNSPPGQYFSPLDCMIKMVAQEGPTAFYKGFTPSFLRLGSWNVVMFVTYEQLKRA 250 260 270 280 290 300 300 pF1KE5 LSKSRQTMDCAT : : NP_003 LMKVQMLRESPF 310 >>NP_073714 (OMIM: 601665,602044) mitochondrial uncoupli (275 aa) initn: 1044 init1: 528 opt: 1035 Z-score: 1237.5 bits: 236.9 E(85289): 3.4e-62 Smith-Waterman score: 1035; 57.1% identity (81.1% similar) in 275 aa overlap (1-270:1-275) 10 20 30 40 50 pF1KE5 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGE---CPTSSVIRYKG : :: ::: ::..:....:: :::.::..::::::::::::.::: :. ...:.: NP_073 MVGLKPSDVPPTMAVKFLGAGTAACFADLVTFPLDTAKVRLQIQGENQAVQTARLVQYRG 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE5 VLGTITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKI ::::: ..:.::: . :.:: ::::::.: ::.::::::.:.. : :: ..: NP_073 VLGTILTMVRTEGPCSPYNGLVAGLQRQMSFASIRIGLYDSVKQVYTPKGADNSSLTTRI 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE5 LAGLTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKP--RYTGTYNAYRIIATTEGLTGLWK ::: :::..:: .:::.:::::.::. :: . .:.::..::: :: ::. :::: NP_073 LAGCTTGAMAVTCAQPTDVVKVRFQASIHLGPSRSDRKYSGTMDAYRTIAREEGVRGLWK 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE5 GTTPNLMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDV :: ::.::..:.::.:.::::..:: .. ..:.:. :::.:::. ::::::...::::: NP_073 GTLPNIMRNAIVNCAEVVTYDILKEKLLDYHLLTDNFPCHFVSAFGAGFCATVVASPVDV 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE5 VKTRFINSPPGQYKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLKRE ::::..::::::: : .: .:. ..::::::.:: NP_073 VKTRYMNSPPGQYFSPLDCMIKMVAQEGPTAFYKG 250 260 270 300 pF1KE5 LSKSRQTMDCAT >>NP_001269127 (OMIM: 300242) brain mitochondrial carrie (290 aa) initn: 549 init1: 203 opt: 597 Z-score: 716.9 bits: 140.7 E(85289): 3.4e-33 Smith-Waterman score: 597; 34.9% identity (70.8% similar) in 281 aa overlap (21-294:13-287) 10 20 30 40 50 pF1KE5 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTSSV--IRYKGV :.:. .:. :::.: .:.::::::. . :.:.:. NP_001 MSGLNWKPFVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDARFKEIKYRGM 10 20 30 40 50 60 70 80 90 100 110 pF1KE5 LGTITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKETAPSLGSKIL . .. . : :: . ::::. .: :: : ....::.:........ : .: ... NP_001 FHALFRICKEEGVLALYSGIAPALLRQASYGTIKIGIYQSLKRLFVERLEDE-TLLINMI 60 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 AGLTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTEGLTGLWKGTT :...: .. :..::.:.:.:.:::. : .. . :.. : :: :::.:.. NP_001 CGVVSGVISSTIANPTDVLKIRMQAQGSL--FQGSMIGSFID---IYQQEGTRGLWRGVV 120 130 140 150 160 180 190 200 210 220 230 pF1KE5 PNLMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATAMSSPVDVVKT :. .:..:. .:: .::. :. .. .....: . :.::.. :. .. :.:::::.: NP_001 PTAQRAAIVVGVELPVYDITKKHLILSGMMGDTILTHFVSSFTCGLAGALASNPVDVVRT 170 180 190 200 210 220 240 250 260 270 280 290 pF1KE5 RFINSPP--GQ---YKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNVIMFVCFEQLK :..:. :. ::.. . .:.. .:: :..::. :..:::: ::.:.:. .:::: NP_001 RMMNQRAIVGHVDLYKGTVDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 230 240 250 260 270 280 300 pF1KE5 RELSKSRQTMDCAT : NP_001 RLQI 290 >>NP_001269125 (OMIM: 300242) brain mitochondrial carrie (322 aa) initn: 549 init1: 203 opt: 597 Z-score: 716.3 bits: 140.7 E(85289): 3.7e-33 Smith-Waterman score: 597; 34.9% identity (70.8% similar) in 281 aa overlap (21-294:45-319) 10 20 30 40 50 pF1KE5 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTS :.:. .:. :::.: .:.::::::. . NP_001 KFATAAVIHQKSTTVSHEMSGLNWKPFVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDA 20 30 40 50 60 70 60 70 80 90 100 pF1KE5 SV--IRYKGVLGTITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKE :.:.:.. .. . : :: . ::::. .: :: : ....::.:........ : NP_001 RFKEIKYRGMFHALFRICKEEGVLALYSGIAPALLRQASYGTIKIGIYQSLKRLFVERLE 80 90 100 110 120 130 110 120 130 140 150 160 pF1KE5 TAPSLGSKILAGLTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTE .: ... :...: .. :..::.:.:.:.:::. : .. . :.. : : NP_001 DE-TLLINMICGVVSGVISSTIANPTDVLKIRMQAQGSL--FQGSMIGSFID---IYQQE 140 150 160 170 180 170 180 190 200 210 220 pF1KE5 GLTGLWKGTTPNLMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATA : :::.:..:. .:..:. .:: .::. :. .. .....: . :.::.. :. .. NP_001 GTRGLWRGVVPTAQRAAIVVGVELPVYDITKKHLILSGMMGDTILTHFVSSFTCGLAGAL 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE5 MSSPVDVVKTRFINSPP--GQ---YKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNV :.:::::.::..:. :. ::.. . .:.. .:: :..::. :..:::: ::. NP_001 ASNPVDVVRTRMMNQRAIVGHVDLYKGTVDGILKMWKHEGFFALYKGFWPNWLRLGPWNI 250 260 270 280 290 300 290 300 pF1KE5 IMFVCFEQLKRELSKSRQTMDCAT :.:. .::::: NP_001 IFFITYEQLKRLQI 310 320 >>NP_001269124 (OMIM: 300242) brain mitochondrial carrie (325 aa) initn: 549 init1: 203 opt: 597 Z-score: 716.2 bits: 140.7 E(85289): 3.7e-33 Smith-Waterman score: 597; 34.9% identity (70.8% similar) in 281 aa overlap (21-294:48-322) 10 20 30 40 50 pF1KE5 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTS :.:. .:. :::.: .:.::::::. . NP_001 TAAVIVSGHQKSTTVSHEMSGLNWKPFVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDA 20 30 40 50 60 70 60 70 80 90 100 pF1KE5 SV--IRYKGVLGTITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKE :.:.:.. .. . : :: . ::::. .: :: : ....::.:........ : NP_001 RFKEIKYRGMFHALFRICKEEGVLALYSGIAPALLRQASYGTIKIGIYQSLKRLFVERLE 80 90 100 110 120 130 110 120 130 140 150 160 pF1KE5 TAPSLGSKILAGLTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTE .: ... :...: .. :..::.:.:.:.:::. : .. . :.. : : NP_001 DE-TLLINMICGVVSGVISSTIANPTDVLKIRMQAQGSL--FQGSMIGSFID---IYQQE 140 150 160 170 180 190 170 180 190 200 210 220 pF1KE5 GLTGLWKGTTPNLMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATA : :::.:..:. .:..:. .:: .::. :. .. .....: . :.::.. :. .. NP_001 GTRGLWRGVVPTAQRAAIVVGVELPVYDITKKHLILSGMMGDTILTHFVSSFTCGLAGAL 200 210 220 230 240 250 230 240 250 260 270 280 pF1KE5 MSSPVDVVKTRFINSPP--GQ---YKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNV :.:::::.::..:. :. ::.. . .:.. .:: :..::. :..:::: ::. NP_001 ASNPVDVVRTRMMNQRAIVGHVDLYKGTVDGILKMWKHEGFFALYKGFWPNWLRLGPWNI 260 270 280 290 300 310 290 300 pF1KE5 IMFVCFEQLKRELSKSRQTMDCAT :.:. .::::: NP_001 IFFITYEQLKRLQI 320 >>XP_011529704 (OMIM: 300242) PREDICTED: brain mitochond (334 aa) initn: 549 init1: 203 opt: 597 Z-score: 716.0 bits: 140.7 E(85289): 3.8e-33 Smith-Waterman score: 597; 34.9% identity (70.8% similar) in 281 aa overlap (21-294:57-331) 10 20 30 40 50 pF1KE5 MGGLTASDVHPTLGVQLFSAGIAACLADVITFPLDTAKVRLQVQGECPTS :.:. .:. :::.: .:.::::::. . XP_011 SKHLHCISHQKSTTVSHEMSGLNWKPFVYGGLASIVAEFGTFPVDLTKTRLQVQGQSIDA 30 40 50 60 70 80 60 70 80 90 100 pF1KE5 SV--IRYKGVLGTITAVVKTEGRMKLYSGLPAGLQRQISSASLRIGLYDTVQEFLTAGKE :.:.:.. .. . : :: . ::::. .: :: : ....::.:........ : XP_011 RFKEIKYRGMFHALFRICKEEGVLALYSGIAPALLRQASYGTIKIGIYQSLKRLFVERLE 90 100 110 120 130 140 110 120 130 140 150 160 pF1KE5 TAPSLGSKILAGLTTGGVAVFIGQPTEVVKVRLQAQSHLHGIKPRYTGTYNAYRIIATTE .: ... :...: .. :..::.:.:.:.:::. : .. . :.. : : XP_011 DE-TLLINMICGVVSGVISSTIANPTDVLKIRMQAQGSL--FQGSMIGSFID---IYQQE 150 160 170 180 190 200 170 180 190 200 210 220 pF1KE5 GLTGLWKGTTPNLMRSVIINCTELVTYDLMKEAFVKNNILADDVPCHLVSALIAGFCATA : :::.:..:. .:..:. .:: .::. :. .. .....: . :.::.. :. .. XP_011 GTRGLWRGVVPTAQRAAIVVGVELPVYDITKKHLILSGMMGDTILTHFVSSFTCGLAGAL 210 220 230 240 250 260 230 240 250 260 270 280 pF1KE5 MSSPVDVVKTRFINSPP--GQ---YKSVPNCAMKVFTNEGPTAFFKGLVPSFLRLGSWNV :.:::::.::..:. :. ::.. . .:.. .:: :..::. :..:::: ::. XP_011 ASNPVDVVRTRMMNQRAIVGHVDLYKGTVDGILKMWKHEGFFALYKGFWPNWLRLGPWNI 270 280 290 300 310 320 290 300 pF1KE5 IMFVCFEQLKRELSKSRQTMDCAT :.:. .::::: XP_011 IFFITYEQLKRLQI 330 307 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 00:05:46 2016 done: Tue Nov 8 00:05:47 2016 Total Scan time: 5.490 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]