FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6581, 132 aa 1>>>pF1KE6581 132 - 132 aa - 132 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3946+/-0.0011; mu= 9.7422+/- 0.066 mean_var=52.7795+/-10.375, 0's: 0 Z-trim(100.2): 24 B-trim: 2 in 1/48 Lambda= 0.176539 statistics sampled from 5999 (6018) to 5999 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.549), E-opt: 0.2 (0.185), width: 16 Scan time: 1.080 The best scores are: opt bits E(32554) CCDS3712.1 FABP2 gene_id:2169|Hs108|chr4 ( 132) 843 222.9 4.6e-59 CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 ( 132) 280 79.5 6.7e-16 CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 ( 133) 264 75.4 1.1e-14 CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 ( 166) 258 73.9 4.1e-14 CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 ( 132) 248 71.3 1.9e-13 CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 ( 132) 238 68.8 1.1e-12 CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 ( 137) 236 68.3 1.6e-12 CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 ( 138) 227 66.0 8.1e-12 >>CCDS3712.1 FABP2 gene_id:2169|Hs108|chr4 (132 aa) initn: 843 init1: 843 opt: 843 Z-score: 1173.9 bits: 222.9 E(32554): 4.6e-59 Smith-Waterman score: 843; 99.2% identity (100.0% similar) in 132 aa overlap (1-132:1-132) 10 20 30 40 50 60 pF1KE6 MAFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHDNLKLTITQEGNKFTVKESSAFRNIE ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::: CCDS37 MAFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHDNLKLTITQEGNKFTVKESSTFRNIE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 VVFELGVTFNYNLADGTELRGTWSLEGNKLIGKFKRTDNGNELNTVREIIGDELVQTYVY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS37 VVFELGVTFNYNLADGTELRGTWSLEGNKLIGKFKRTDNGNELNTVREIIGDELVQTYVY 70 80 90 100 110 120 130 pF1KE6 EGVEAKRIFKKD :::::::::::: CCDS37 EGVEAKRIFKKD 130 >>CCDS5127.1 FABP7 gene_id:2173|Hs108|chr6 (132 aa) initn: 270 init1: 227 opt: 280 Z-score: 398.9 bits: 79.5 E(32554): 6.7e-16 Smith-Waterman score: 280; 35.4% identity (70.8% similar) in 130 aa overlap (2-131:4-131) 10 20 30 40 50 pF1KE6 MAFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHDNLKLTITQEGNKFTVKESSAFRN :: .:::. :.:.:..:. .::... :... . . :.:::.: ... :.:.: CCDS51 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTFKN 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE6 IEVVFELGVTFNYNLADGTELRGTWSLEGNKLIGKFKRTDNGNELNTVREIIGDELVQTY :. :.:: :. . :: . ... ::.:.::. .... : :.: : :::: ..:.: CCDS51 TEISFQLGEEFDETTADDRNCKSVVSLDGDKLV-HIQKWD-GKETNFVREIKDGKMVMTL 70 80 90 100 110 120 130 pF1KE6 VYEGVEAKRIFKKD .. : : : ..: CCDS51 TFGDVVAVRHYEKA 120 130 >>CCDS342.1 FABP3 gene_id:2170|Hs108|chr1 (133 aa) initn: 264 init1: 219 opt: 264 Z-score: 376.8 bits: 75.4 E(32554): 1.1e-14 Smith-Waterman score: 264; 32.8% identity (70.2% similar) in 131 aa overlap (2-132:4-132) 10 20 30 40 50 pF1KE6 MAFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHDNLKLTITQEGNKFTVKESSAFRN :: .:::. :.:.: .:...::... :..:. . : ..:. .:.: :.:.: CCDS34 MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKN 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE6 IEVVFELGVTFNYNLADGTELRGTWSLEGNKLIGKFKRTDNGNELNTVREIIGDELVQTY :. :.::: :. . :: .... .:.:.::. .... : :.: . :::.: .:. : CCDS34 TEISFKLGVEFDETTADDRKVKSIVTLDGGKLV-HLQKWD-GQETTLVRELIDGKLILTL 70 80 90 100 110 120 130 pF1KE6 VYEGVEAKRIFKKD .. . : ..:. CCDS34 THGTAVCTRTYEKEA 120 130 >>CCDS83121.1 FABP7 gene_id:2173|Hs108|chr6 (166 aa) initn: 270 init1: 227 opt: 258 Z-score: 366.9 bits: 73.9 E(32554): 4.1e-14 Smith-Waterman score: 258; 36.0% identity (71.9% similar) in 114 aa overlap (2-115:4-115) 10 20 30 40 50 pF1KE6 MAFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHDNLKLTITQEGNKFTVKESSAFRN :: .:::. :.:.:..:. .::... :... . . :.:::.: ... :.:.: CCDS83 MVEAFCATWKLTNSQNFDEYMKALGVGFATRQVGNVTKPTVIISQEGDKVVIRTLSTFKN 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE6 IEVVFELGVTFNYNLADGTELRGTWSLEGNKLIGKFKRTDNGNELNTVREIIGDELVQTY :. :.:: :. . :: . ... ::.:.::. .... : :.: : :::: ..: CCDS83 TEISFQLGEEFDETTADDRNCKSVVSLDGDKLV-HIQKWD-GKETNFVREIKDGKMVMVS 70 80 90 100 110 120 130 pF1KE6 VYEGVEAKRIFKKD CCDS83 NDNSPFFLVFFSSPHTSHLLPSSSLLLPFFLLPSFFNNTSLARFFNYM 120 130 140 150 160 >>CCDS6230.1 FABP4 gene_id:2167|Hs108|chr8 (132 aa) initn: 240 init1: 214 opt: 248 Z-score: 354.9 bits: 71.3 E(32554): 1.9e-13 Smith-Waterman score: 248; 33.1% identity (67.7% similar) in 130 aa overlap (2-131:4-131) 10 20 30 40 50 pF1KE6 MAFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHDNLKLTITQEGNKFTVKESSAFRN :: .:::. :::.: .:...::... ::.:. . .. :. .:. .:.: :.:.: CCDS62 MCDAFVGTWKLVSSENFDDYMKEVGVGFATRKVAGMAKPNMIISVNGDVITIKSESTFKN 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE6 IEVVFELGVTFNYNLADGTELRGTWSLEGNKLIGKFKRTDNGNELNTVREIIGDELVQTY :. : :: :. :: ....: .:.:. :. : ... .. :: :.:: CCDS62 TEISFILGQEFDEVTADDRKVKSTITLDGGVLVHVQKWDGKSTTIKRKRE--DDKLVVEC 70 80 90 100 110 120 130 pF1KE6 VYEGVEAKRIFKKD :..:: . :.... CCDS62 VMKGVTSTRVYERA 120 130 >>CCDS6229.1 PMP2 gene_id:5375|Hs108|chr8 (132 aa) initn: 224 init1: 188 opt: 238 Z-score: 341.1 bits: 68.8 E(32554): 1.1e-12 Smith-Waterman score: 238; 31.0% identity (68.2% similar) in 129 aa overlap (3-131:5-131) 10 20 30 40 50 pF1KE6 MAFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHDNLKLTITQEGNKFTVKESSAFRN : .:::. :::.: .:. .::... :::. . . :...:. .:.. :.:.: CCDS62 MSNKFLGTWKLVSSENFDDYMKALGVGLATRKLGNLAKPTVIISKKGDIITIRTESTFKN 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE6 IEVVFELGVTFNYNLADGTELRGTWSLEGNKLIGKFKRTDNGNELNTVREIIGDELVQTY :. :.:: :. . ::. . .. .:. ..: .. .: : :.: . :.... ..: CCDS62 TEISFKLGQEFEETTADNRKTKSIVTLQRGSL-NQVQRWD-GKETTIKRKLVNGKMVAEC 70 80 90 100 110 120 130 pF1KE6 VYEGVEAKRIFKKD ..:: ::..: CCDS62 KMKGVVCTRIYEKV 120 130 >>CCDS10301.1 CRABP1 gene_id:1381|Hs108|chr15 (137 aa) initn: 168 init1: 98 opt: 236 Z-score: 338.1 bits: 68.3 E(32554): 1.6e-12 Smith-Waterman score: 236; 31.3% identity (63.4% similar) in 134 aa overlap (3-132:4-137) 10 20 30 40 50 pF1KE6 MAFDSTWKVDRSENYDKFMEKMGVNIVKRKLA--AHDNLKLTITQEGNKFTVKESSAFR : .:::. :::.:.... .::: . ::.: : .. .. : :.:..: .: :.. : CCDS10 MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVR 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE6 NIEVVFELGVTFNYNLADGTELRG--TWSLEGNKLIGKFKRTDNGNELNTVREIIGDELV . :. :..: :. . .:: . :. :: :.. . .: . .::. .:::. CCDS10 TTEINFKVGEGFEEETVDGRKCRSLATWENENKIHCTQTLLEGDGPKTYWTRELANDELI 70 80 90 100 110 120 120 130 pF1KE6 QTYVYEGVEAKRIFKKD :. . : ::. .. CCDS10 LTFGADDVVCTRIYVRE 130 >>CCDS1152.1 CRABP2 gene_id:1382|Hs108|chr1 (138 aa) initn: 185 init1: 100 opt: 227 Z-score: 325.6 bits: 66.0 E(32554): 8.1e-12 Smith-Waterman score: 227; 30.9% identity (64.7% similar) in 136 aa overlap (3-132:4-138) 10 20 30 40 50 pF1KE6 MAFDSTWKVDRSENYDKFMEKMGVNIVKRKLAAHDNLK--LTITQEGNKFTVKESSAFR :...::. ::::...... .:::.. ::.:. : . : :::. : .: :.. : CCDS11 MPNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTVR 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE6 NIEVVFELGVTFNYNLADGTELRGT--WSLEGNKLIGKFKRTDN-GNELNTVREIIGD-E . :. :..: :. . .:: .. : : ::.. . : . : . . .::. .: : CCDS11 TTEINFKVGEEFEEQTVDGRPCKSLVKWESE-NKMVCEQKLLKGEGPKTSWTRELTNDGE 70 80 90 100 110 120 130 pF1KE6 LVQTYVYEGVEAKRIFKKD :. :.. . : :.. .. CCDS11 LILTMTADDVVCTRVYVRE 120 130 132 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:34:39 2016 done: Tue Nov 8 14:34:39 2016 Total Scan time: 1.080 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]