FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6641, 259 aa 1>>>pF1KE6641 259 - 259 aa - 259 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8790+/-0.000848; mu= 13.1339+/- 0.051 mean_var=107.0708+/-20.967, 0's: 0 Z-trim(110.4): 30 B-trim: 69 in 2/51 Lambda= 0.123948 statistics sampled from 11543 (11558) to 11543 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.724), E-opt: 0.2 (0.355), width: 16 Scan time: 1.510 The best scores are: opt bits E(32554) CCDS3675.1 DKK2 gene_id:27123|Hs108|chr4 ( 259) 1869 344.4 4.7e-95 CCDS7246.1 DKK1 gene_id:22943|Hs108|chr10 ( 266) 729 140.5 1.1e-33 CCDS6130.1 DKK4 gene_id:27121|Hs108|chr8 ( 224) 568 111.7 4.5e-25 >>CCDS3675.1 DKK2 gene_id:27123|Hs108|chr4 (259 aa) initn: 1869 init1: 1869 opt: 1869 Z-score: 1820.0 bits: 344.4 E(32554): 4.7e-95 Smith-Waterman score: 1869; 99.6% identity (100.0% similar) in 259 aa overlap (1-259:1-259) 10 20 30 40 50 60 pF1KE6 MAALMRSKDSSCCLLLLAAVLMVESSQIGSSRAKLNSIKSSLGGETPGQAANRSAGMYQG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS36 MAALMRSKDSSCCLLLLAAVLMVESSQIGSSRAKLNSIKSSLGGETPGQAANRSAGMYQG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 LAFGGSKKGKNLGQAYPCSSDKECEVGRYCHSPHQGSSACMVCRRKKKRCHRDGMCCPST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS36 LAFGGSKKGKNLGQAYPCSSDKECEVGRYCHSPHQGSSACMVCRRKKKRCHRDGMCCPST 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 RCNNGICIPVTESILTPHIPALDGTQHRDRNHGHYSNHDLGWQNLGRPHTKMSHIKGHEG :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: CCDS36 RCNNGICIPVTESILTPHIPALDGTRHRDRNHGHYSNHDLGWQNLGRPHTKMSHIKGHEG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 DPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDCAKGLSCK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS36 DPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLEIFQRCDCAKGLSCK 190 200 210 220 230 240 250 pF1KE6 VWKDATYSSKARLHVCQKI ::::::::::::::::::: CCDS36 VWKDATYSSKARLHVCQKI 250 >>CCDS7246.1 DKK1 gene_id:22943|Hs108|chr10 (266 aa) initn: 595 init1: 436 opt: 729 Z-score: 718.2 bits: 140.5 E(32554): 1.1e-33 Smith-Waterman score: 729; 42.9% identity (68.1% similar) in 273 aa overlap (1-258:1-265) 10 20 30 40 50 pF1KE6 MAALMRSKDSSCCLLLLAAVL----MVESSQIGSSRAKLNSIKS---SLGGET--PGQAA : :: . . . ..::.: .. : .: . :.::. ::: . ::.:. CCDS72 MMALGAAGATRVFVAMVAAALGGHPLLGVSATLNSVLNSNAIKNLPPPLGGAAGHPGSAV 10 20 30 40 50 60 60 70 80 90 100 pF1KE6 NRSAGMYQGLAFGGSK-KGKNLGQAYPCSSDKECEVGRYCHSPHQGSSA----CMVCRRK . . :. : ::.: . . : :::. :.:: . .:: :: .:..: :..::.. CCDS72 SAAPGI---LYPGGNKYQTIDNYQPYPCAEDEECGTDEYCASPTRGGDAGVQICLACRKR 70 80 90 100 110 110 120 130 140 150 160 pF1KE6 KKRCHRDGMCCPSTRCNNGICIPVTESILTPHIPALDGTQHRDRNHGHYSNHDLGWQNLG .::: : .::::.. :.::::. .. . .: . : .. .. : :. : :.. CCDS72 RKRCMRHAMCCPGNYCKNGICVSSDQNHFRGEI---EETITESFGNDH-STLD-GYSRRT 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE6 RPHTKMSHIKGHEGDPCLRSSDCIEGFCCARHFWTKICKPVLHQGEVCTKQRKKGSHGLE .:: : ::.::. ::::::: :.:::::::.:::::::..:.::::.:.::::::: CCDS72 TLSSKMYHTKGQEGSVCLRSSDCASGLCCARHFWSKICKPVLKEGQVCTKHRRKGSHGLE 180 190 200 210 220 230 230 240 250 pF1KE6 IFQRCDCAKGLSCKVWKDATYSSKA-RLHVCQKI ::::: :..::::.. :: .:.. :::.::. CCDS72 IFQRCYCGEGLSCRIQKDHHQASNSSRLHTCQRH 240 250 260 >>CCDS6130.1 DKK4 gene_id:27121|Hs108|chr8 (224 aa) initn: 429 init1: 242 opt: 568 Z-score: 563.6 bits: 111.7 E(32554): 4.5e-25 Smith-Waterman score: 568; 42.2% identity (68.8% similar) in 199 aa overlap (65-259:34-221) 40 50 60 70 80 90 pF1KE6 LNSIKSSLGGETPGQAANRSAGMYQGLAFGGSKKGKNLGQAYPCSSDKECEVGRYCHSPH :..::.. : :: .:.. ..: .:. CCDS61 AVLLGLSWLCSPLGALVLDFNNIRSSADLHGARKGSQ------CLSDTDCNTRKFCLQPR 10 20 30 40 50 100 110 120 130 140 150 pF1KE6 QGSSACMVCRRKKKRCHRDGMCCPSTRCNNGICIPVTES--ILTPHIPALDGTQHRDRNH . . : .:: ..::.::.::::.: : : .: . .. :: .. ::: : . . CCDS61 DEKPFCATCRGLRRRCQRDAMCCPGTLCVNDVCTTMEDATPILERQLDEQDGT-HAEGTT 60 70 80 90 100 110 160 170 180 190 200 210 pF1KE6 GHYSNHDLGWQNLGRPHTKMSHI-KGHEGDPCLRSSDCIEGFCCARHFWTKICKPVLHQG :: ... : .: : :. ::.::. :::. :: :.::::::::::::::: .: CCDS61 GHPVQEN---QPKRKPSIKKSQGRKGQEGESCLRTFDCGPGLCCARHFWTKICKPVLLEG 120 130 140 150 160 170 220 230 240 250 pF1KE6 EVCTKQRKKGS-HGLEIFQRCDCAKGLSCKVWKDATYSSKARLHVCQKI .::... .: . .. ::::::::. :: :. . .. ..:::.::::: CCDS61 QVCSRRGHKDTAQAPEIFQRCDCGPGLLCRS-QLTSNRQHARLRVCQKIEKL 180 190 200 210 220 259 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 15:02:00 2016 done: Tue Nov 8 15:02:01 2016 Total Scan time: 1.510 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]