FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1605, 109 aa 1>>>pF1KE1605 109 - 109 aa - 109 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.6532+/-0.000601; mu= 12.7882+/- 0.036 mean_var=51.3536+/- 9.851, 0's: 0 Z-trim(110.4): 44 B-trim: 70 in 1/50 Lambda= 0.178974 statistics sampled from 11570 (11614) to 11570 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.76), E-opt: 0.2 (0.357), width: 16 Scan time: 1.570 The best scores are: opt bits E(32554) CCDS3582.1 CXCL13 gene_id:10563|Hs108|chr4 ( 109) 727 194.6 9.9e-51 >>CCDS3582.1 CXCL13 gene_id:10563|Hs108|chr4 (109 aa) initn: 727 init1: 727 opt: 727 Z-score: 1024.2 bits: 194.6 E(32554): 9.9e-51 Smith-Waterman score: 727; 100.0% identity (100.0% similar) in 109 aa overlap (1-109:1-109) 10 20 30 40 50 60 pF1KE1 MKFISTSLLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 MKFISTSLLLMLLVSSLSPVQGVLEVYYTSLRCRCVQESSVFIPRRFIDRIQILPRGNGC 10 20 30 40 50 60 70 80 90 100 pF1KE1 PRKEIIVWKKNKSIVCVDPQAEWIQRMMEVLRKRSSSTLPVPVFKRKIP ::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 PRKEIIVWKKNKSIVCVDPQAEWIQRMMEVLRKRSSSTLPVPVFKRKIP 70 80 90 100 109 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 17:28:07 2016 done: Sun Nov 6 17:28:07 2016 Total Scan time: 1.570 Total Display time: -0.030 Function used was FASTA [36.3.4 Apr, 2011]