FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2417, 447 aa 1>>>pF1KE2417 447 - 447 aa - 447 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 10.7241+/-0.000409; mu= -5.7745+/- 0.025 mean_var=379.3520+/-80.610, 0's: 0 Z-trim(122.7): 46 B-trim: 1852 in 2/57 Lambda= 0.065850 statistics sampled from 41313 (41375) to 41313 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.784), E-opt: 0.2 (0.485), width: 16 Scan time: 8.830 The best scores are: opt bits E(85289) NP_057603 (OMIM: 601259,616270) ameloblastin precu ( 447) 3106 308.9 1.8e-83 >>NP_057603 (OMIM: 601259,616270) ameloblastin precursor (447 aa) initn: 3106 init1: 3106 opt: 3106 Z-score: 1619.7 bits: 308.9 E(85289): 1.8e-83 Smith-Waterman score: 3106; 99.8% identity (99.8% similar) in 447 aa overlap (1-447:1-447) 10 20 30 40 50 60 pF1KE2 MSASKIPLFKMKDLILILCLLEMSFAVPFFPQQSGTPGMASLSLETMRQLGSLQRLNTLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 MSASKIPLFKMKDLILILCLLEMSFAVPFFPQQSGTPGMASLSLETMRQLGSLQRLNTLS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 QYSRYGFGKSFNSLWMHGLLPPHSSLPWMRPREHETQQYEYSLPVHPPPLPSQPSLKPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 QYSRYGFGKSFNSLWMHGLLPPHSSLPWMRPREHETQQYEYSLPVHPPPLPSQPSLKPQQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 PGLKPFLQSAAATTNQATALKEALQPPIHLGHLPLQEGELPLVQQQVAPSDKPPKPELPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 PGLKPFLQSAAATTNQATALKEALQPPIHLGHLPLQEGELPLVQQQVAPSDKPPKPELPG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 VDFADPQGPSLPGMDFPDPQGPSLPGLDFADPQGSTIFQIARLISHGPMPQNKQSPLYPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 VDFADPQGPSLPGMDFPDPQGPSLPGLDFADPQGSTIFQIARLISHGPMPQNKQSPLYPG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 MLYVPFGANQLNAPARLGIMSSEEVAGGREDPMAYGAMFPGFGGMRPGFEGMPHNPAMGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 MLYVPFGANQLNAPARLGIMSSEEVAGGREDPMAYGAMFPGFGGMRPGFEGMPHNPAMGG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 DFTLEFDSPVAATKGPENEEGGAQGSPMPEANPDNLENPAFLTELEPAPHAGLPALPKDD ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: NP_057 DFTLEFDSPVAATKGPENEEGGAQGSPMPEANPDNLENPAFLTELEPAPHAGLLALPKDD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 IPGLPRSPSGKMKGLPSVTPAAADPLMTPELADVYRTYDADMTTSVDFQEEATMDTTMAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_057 IPGLPRSPSGKMKGLPSVTPAAADPLMTPELADVYRTYDADMTTSVDFQEEATMDTTMAP 370 380 390 400 410 420 430 440 pF1KE2 NSLQTSMPGNKAQEPEMMHDAWHFQEP ::::::::::::::::::::::::::: NP_057 NSLQTSMPGNKAQEPEMMHDAWHFQEP 430 440 447 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 19:33:44 2016 done: Mon Nov 7 19:33:45 2016 Total Scan time: 8.830 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]