FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2417, 447 aa 1>>>pF1KE2417 447 - 447 aa - 447 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.9821+/-0.000959; mu= -1.5861+/- 0.058 mean_var=317.6767+/-64.867, 0's: 0 Z-trim(114.9): 44 B-trim: 163 in 1/53 Lambda= 0.071958 statistics sampled from 15452 (15489) to 15452 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.779), E-opt: 0.2 (0.476), width: 16 Scan time: 3.000 The best scores are: opt bits E(32554) CCDS3543.1 AMBN gene_id:258|Hs108|chr4 ( 447) 3106 335.8 5.3e-92 >>CCDS3543.1 AMBN gene_id:258|Hs108|chr4 (447 aa) initn: 3106 init1: 3106 opt: 3106 Z-score: 1765.1 bits: 335.8 E(32554): 5.3e-92 Smith-Waterman score: 3106; 99.8% identity (99.8% similar) in 447 aa overlap (1-447:1-447) 10 20 30 40 50 60 pF1KE2 MSASKIPLFKMKDLILILCLLEMSFAVPFFPQQSGTPGMASLSLETMRQLGSLQRLNTLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 MSASKIPLFKMKDLILILCLLEMSFAVPFFPQQSGTPGMASLSLETMRQLGSLQRLNTLS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 QYSRYGFGKSFNSLWMHGLLPPHSSLPWMRPREHETQQYEYSLPVHPPPLPSQPSLKPQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 QYSRYGFGKSFNSLWMHGLLPPHSSLPWMRPREHETQQYEYSLPVHPPPLPSQPSLKPQQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 PGLKPFLQSAAATTNQATALKEALQPPIHLGHLPLQEGELPLVQQQVAPSDKPPKPELPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 PGLKPFLQSAAATTNQATALKEALQPPIHLGHLPLQEGELPLVQQQVAPSDKPPKPELPG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 VDFADPQGPSLPGMDFPDPQGPSLPGLDFADPQGSTIFQIARLISHGPMPQNKQSPLYPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 VDFADPQGPSLPGMDFPDPQGPSLPGLDFADPQGSTIFQIARLISHGPMPQNKQSPLYPG 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE2 MLYVPFGANQLNAPARLGIMSSEEVAGGREDPMAYGAMFPGFGGMRPGFEGMPHNPAMGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 MLYVPFGANQLNAPARLGIMSSEEVAGGREDPMAYGAMFPGFGGMRPGFEGMPHNPAMGG 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE2 DFTLEFDSPVAATKGPENEEGGAQGSPMPEANPDNLENPAFLTELEPAPHAGLPALPKDD ::::::::::::::::::::::::::::::::::::::::::::::::::::: :::::: CCDS35 DFTLEFDSPVAATKGPENEEGGAQGSPMPEANPDNLENPAFLTELEPAPHAGLLALPKDD 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE2 IPGLPRSPSGKMKGLPSVTPAAADPLMTPELADVYRTYDADMTTSVDFQEEATMDTTMAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 IPGLPRSPSGKMKGLPSVTPAAADPLMTPELADVYRTYDADMTTSVDFQEEATMDTTMAP 370 380 390 400 410 420 430 440 pF1KE2 NSLQTSMPGNKAQEPEMMHDAWHFQEP ::::::::::::::::::::::::::: CCDS35 NSLQTSMPGNKAQEPEMMHDAWHFQEP 430 440 447 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 19:33:43 2016 done: Mon Nov 7 19:33:43 2016 Total Scan time: 3.000 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]