FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4381, 401 aa 1>>>pF1KE4381 401 - 401 aa - 401 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2810+/-0.00104; mu= 16.7123+/- 0.062 mean_var=62.5112+/-12.485, 0's: 0 Z-trim(103.2): 36 B-trim: 156 in 1/50 Lambda= 0.162217 statistics sampled from 7260 (7290) to 7260 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.596), E-opt: 0.2 (0.224), width: 16 Scan time: 2.620 The best scores are: opt bits E(32554) CCDS33882.1 KCNAB1 gene_id:7881|Hs108|chr3 ( 401) 2629 624.2 6.4e-179 CCDS3175.1 KCNAB1 gene_id:7881|Hs108|chr3 ( 408) 2236 532.3 3.2e-151 CCDS3174.1 KCNAB1 gene_id:7881|Hs108|chr3 ( 419) 2214 527.1 1.1e-149 CCDS56.1 KCNAB2 gene_id:8514|Hs108|chr1 ( 353) 1946 464.4 7.5e-131 CCDS55.1 KCNAB2 gene_id:8514|Hs108|chr1 ( 367) 1940 463.0 2.1e-130 CCDS11124.1 KCNAB3 gene_id:9196|Hs108|chr17 ( 404) 1817 434.2 1e-121 CCDS55571.1 KCNAB2 gene_id:8514|Hs108|chr1 ( 300) 1734 414.7 5.6e-116 CCDS77845.1 KCNAB1 gene_id:7881|Hs108|chr3 ( 372) 1354 325.8 4e-89 CCDS77844.1 KCNAB1 gene_id:7881|Hs108|chr3 ( 390) 1354 325.8 4.2e-89 CCDS55570.1 KCNAB2 gene_id:8514|Hs108|chr1 ( 415) 1163 281.2 1.3e-75 CCDS194.1 AKR7A2 gene_id:8574|Hs108|chr1 ( 359) 264 70.7 2.4e-12 CCDS193.1 AKR7A3 gene_id:22977|Hs108|chr1 ( 331) 261 70.0 3.6e-12 >>CCDS33882.1 KCNAB1 gene_id:7881|Hs108|chr3 (401 aa) initn: 2629 init1: 2629 opt: 2629 Z-score: 3325.6 bits: 624.2 E(32554): 6.4e-179 Smith-Waterman score: 2629; 100.0% identity (100.0% similar) in 401 aa overlap (1-401:1-401) 10 20 30 40 50 60 pF1KE4 MQVSIACTEHNLKSRNGEDRLLSKQSSTAPNVVNAARAKFRTVAIIARSLGTFTPQHHIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 MQVSIACTEHNLKSRNGEDRLLSKQSSTAPNVVNAARAKFRTVAIIARSLGTFTPQHHIS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 LKESTAKQTGMKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 LKESTAKQTGMKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 AEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 AEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQR 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 LQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 LQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFN 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 MIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 MIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRAS 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 LKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 LKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSST 310 320 330 340 350 360 370 380 390 400 pF1KE4 PEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKKDYRS ::::::::::::::::::::::::::::::::::::::::: CCDS33 PEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKKDYRS 370 380 390 400 >>CCDS3175.1 KCNAB1 gene_id:7881|Hs108|chr3 (408 aa) initn: 2235 init1: 2235 opt: 2236 Z-score: 2828.5 bits: 532.3 E(32554): 3.2e-151 Smith-Waterman score: 2236; 97.1% identity (98.0% similar) in 349 aa overlap (53-401:60-408) 30 40 50 60 70 80 pF1KE4 SKQSSTAPNVVNAARAKFRTVAIIARSLGTFTPQHHISLKESTAKQTGMKYRNLGKSGLR : : :::.:.: .::: :::::::::: CCDS31 WHLAVTKTQPQAACKPVRPSGAAEQKYVEKFLRVHGISLQETTRAETGMAYRNLGKSGLR 30 40 50 60 70 80 90 100 110 120 130 140 pF1KE4 VSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 VSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGW 90 100 110 120 130 140 150 160 170 180 190 200 pF1KE4 RRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 RRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEE 150 160 170 180 190 200 210 220 230 240 250 260 pF1KE4 IVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 IVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQ 210 220 230 240 250 260 270 280 290 300 310 320 pF1KE4 LPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQQNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 LPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQQNK 270 280 290 300 310 320 330 340 350 360 370 380 pF1KE4 LKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 LKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHVV 330 340 350 360 370 380 390 400 pF1KE4 NEIDNILRNKPYSKKDYRS ::::::::::::::::::: CCDS31 NEIDNILRNKPYSKKDYRS 390 400 >>CCDS3174.1 KCNAB1 gene_id:7881|Hs108|chr3 (419 aa) initn: 2200 init1: 2200 opt: 2214 Z-score: 2800.5 bits: 527.1 E(32554): 1.1e-149 Smith-Waterman score: 2214; 89.7% identity (94.5% similar) in 380 aa overlap (23-401:42-419) 10 20 30 40 50 pF1KE4 MQVSIACTEHNLKSRNGEDRLLSKQSSTAPNVVNAARAKFRTVAIIAR-SLG .:.:: .:. . :: : .:.. . .. CCDS31 QISEENTKLRRQSGFSVAGKDKSPKKASENAKDSSLSPSGESQLRA--RQLALLREVEMN 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 TFTPQHHISLKESTAKQTGMKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAY . .: ...:. ::: .:::::::::::::::::::::::::::::::::::::: CCDS31 WYLKLCDLSSEHTTVCTTGMPHRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAY 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 ESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 ESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHII 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE4 EGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIME :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 EGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIME 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE4 AYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 AYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGN 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE4 GVPESSRASLKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 GVPESSRASLKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGV 310 320 330 340 350 360 360 370 380 390 400 pF1KE4 SSVLLGSSTPEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKKDYRS :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 SSVLLGSSTPEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKKDYRS 370 380 390 400 410 >>CCDS56.1 KCNAB2 gene_id:8514|Hs108|chr1 (353 aa) initn: 1943 init1: 1943 opt: 1946 Z-score: 2462.6 bits: 464.4 E(32554): 7.5e-131 Smith-Waterman score: 1946; 82.2% identity (95.0% similar) in 343 aa overlap (59-401:13-353) 30 40 50 60 70 80 pF1KE4 APNVVNAARAKFRTVAIIARSLGTFTPQHHISLKESTAKQTGMKYRNLGKSGLRVSCLGL .::... . :: :::::::::::::::: CCDS56 MYPESTTGSPARLSLRQTGS--PGMIYRNLGKSGLRVSCLGL 10 20 30 40 90 100 110 120 130 140 pF1KE4 GTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLV ::::::::::.::.::.:::.::..:.::::::::::::::::.::.::::::::::::: CCDS56 GTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSSLV 50 60 70 80 90 100 150 160 170 180 190 200 pF1KE4 ITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMT ::::..:::::::::::::::::::::.::.:::::::::::::::: :::::: ::::: CCDS56 ITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMT 110 120 130 140 150 160 210 220 230 240 250 260 pF1KE4 HVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYH :::::::::::::::::.::::::::::::::. ::.:::::::.:::::::::::::.: CCDS56 HVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFH 170 180 190 200 210 220 270 280 290 300 310 320 pF1KE4 KIGVGAMTWSPLACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQQNKLKDLSP ::::::::::::::::.:::: .:.: :::::: :::::..:.:::::.:: :::.:. CCDS56 KIGVGAMTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQA 230 240 250 260 270 280 330 340 350 360 370 380 pF1KE4 IAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHVVNEIDNI :::::::::::::.:::::::::::::::.:. .::.::.::::::::..: ...:::.: CCDS56 IAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSI 290 300 310 320 330 340 390 400 pF1KE4 LRNKPYSKKDYRS : ::::::::::: CCDS56 LGNKPYSKKDYRS 350 >>CCDS55.1 KCNAB2 gene_id:8514|Hs108|chr1 (367 aa) initn: 1931 init1: 1931 opt: 1940 Z-score: 2454.8 bits: 463.0 E(32554): 2.1e-130 Smith-Waterman score: 1940; 80.6% identity (93.4% similar) in 350 aa overlap (52-401:18-367) 30 40 50 60 70 80 pF1KE4 LSKQSSTAPNVVNAARAKFRTVAIIARSLGTFTPQHHISLKESTAKQTGMKYRNLGKSGL : .: : . .. :. . ::::::::: CCDS55 MYPESTTGSPARLSLRQTGSPGMIYSTRYGSPKRQLQFYRNLGKSGL 10 20 30 40 90 100 110 120 130 140 pF1KE4 RVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKG :::::::::::::::::.::.::.:::.::..:.::::::::::::::::.::.:::::: CCDS55 RVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKG 50 60 70 80 90 100 150 160 170 180 190 200 pF1KE4 WRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPME :::::::::::..:::::::::::::::::::::.::.:::::::::::::::: ::::: CCDS55 WRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPME 110 120 130 140 150 160 210 220 230 240 250 260 pF1KE4 EIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEV : ::::::::::::::::::::::.::::::::::::::. ::.:::::::.:::::::: CCDS55 ETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEYHMFQREKVEV 170 180 190 200 210 220 270 280 290 300 310 320 pF1KE4 QLPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRASLKCYQWLKERIVSEEGRKQQN :::::.:::::::::::::::::.:::: .:.: :::::: :::::..:.:::::.:: CCDS55 QLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQA 230 240 250 260 270 280 330 340 350 360 370 380 pF1KE4 KLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHV :::.:. :::::::::::::.:::::::::::::::.:. .::.::.::::::::..: . CCDS55 KLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAIQVLPKLSSSI 290 300 310 320 330 340 390 400 pF1KE4 VNEIDNILRNKPYSKKDYRS ..:::.:: ::::::::::: CCDS55 IHEIDSILGNKPYSKKDYRS 350 360 >>CCDS11124.1 KCNAB3 gene_id:9196|Hs108|chr17 (404 aa) initn: 1851 init1: 1752 opt: 1817 Z-score: 2298.6 bits: 434.2 E(32554): 1e-121 Smith-Waterman score: 1817; 67.6% identity (84.9% similar) in 410 aa overlap (1-397:1-404) 10 20 30 40 pF1KE4 MQVSIACTEHNLKSRNGEDRLLSKQSSTA-------------PNVVNAARAKFRTVAIIA :::::::::.::.::..:::: . . . . : ... : :. :.. CCDS11 MQVSIACTEQNLRSRSSEDRLCGPRPGPGGGNGGPAGGGHGNPPGGGGSGPKARA-ALVP 10 20 30 40 50 50 60 70 80 90 100 pF1KE4 RSLGTFTPQHHISLKESTAKQTGMKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLM : : .:.:::.. :::::::::::::::::::::::::::.:::::.:: .. CCDS11 RP-----PAPAGALRESTGRGTGMKYRNLGKSGLRVSCLGLGTWVTFGSQISDETAEDVL 60 70 80 90 100 110 110 120 130 140 150 160 pF1KE4 TIAYESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSR :.::: ::::::::::::::::: ::.:.:.::::::: :::::..:::.::::::::: CCDS11 TVAYEHGVNLFDTAEVYAAGKAERTLGNILKSKGWRRSSYVITTKIFWGGQAETERGLSR 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE4 KHIIEGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAM :::::::.:::.:::: :::.::::: : : ::::::::::.:::::.:.:::::::.: CCDS11 KHIIEGLRGSLERLQLGYVDIVFANRSDPNCPMEEIVRAMTYVINQGLALYWGTSRWGAA 180 190 200 210 220 230 230 240 250 260 270 280 pF1KE4 EIMEAYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISG :::::::.:::::.:::::::::.:::::::::.::::::::::::..:: :::::.:.. CCDS11 EIMEAYSMARQFNLIPPVCEQAEHHLFQREKVEMQLPELYHKIGVGSVTWYPLACGLITS 240 250 260 270 280 290 290 300 310 320 330 340 pF1KE4 KYGNGVPESSRASLKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLR :: . ::.. :::.: :::::... ::.:.::: :. :: :.:..::::. :::.::::: CCDS11 KYDGRVPDTCRASIKGYQWLKDKVQSEDGKKQQAKVMDLLPVAHQLGCTVAQLAIAWCLR 300 310 320 330 340 350 350 360 370 380 390 400 pF1KE4 NEGVSSVLLGSSTPEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKKDYRS .::::::::: :. :::::.:::.::: ..: ..: :::..: :::.::: CCDS11 SEGVSSVLLGVSSAEQLIEHLGALQVLSQLTPQTVMEIDGLLGNKPHSKK 360 370 380 390 400 >>CCDS55571.1 KCNAB2 gene_id:8514|Hs108|chr1 (300 aa) initn: 1734 init1: 1734 opt: 1734 Z-score: 2195.6 bits: 414.7 E(32554): 5.6e-116 Smith-Waterman score: 1734; 83.3% identity (96.0% similar) in 300 aa overlap (102-401:1-300) 80 90 100 110 120 130 pF1KE4 KYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAAGKAEV .::.:::.::..:.:::::::::::::::: CCDS55 MAEQLMTLAYDNGINLFDTAEVYAAGKAEV 10 20 30 140 150 160 170 180 190 pF1KE4 ILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYVDVVFA .::.:::::::::::::::::..:::::::::::::::::::::.::.:::::::::::: CCDS55 VLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYVDVVFA 40 50 60 70 80 90 200 210 220 230 240 250 pF1KE4 NRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFNMIPPVCEQAEY :::: :::::: ::::::::::::::::::::::.::::::::::::::. ::.:::::: CCDS55 NRPDPNTPMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLTPPICEQAEY 100 110 120 130 140 150 260 270 280 290 300 310 pF1KE4 HLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRASLKCYQWLKERI :.:::::::::::::.:::::::::::::::::.:::: .:.: :::::: :::::..: CCDS55 HMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDSGIPPYSRASLKGYQWLKDKI 160 170 180 190 200 210 320 330 340 350 360 370 pF1KE4 VSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSSTPEQLIENLGAI .:::::.:: :::.:. :::::::::::::.:::::::::::::::.:. .::.::.::: CCDS55 LSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNADQLMENIGAI 220 230 240 250 260 270 380 390 400 pF1KE4 QVLPKMTSHVVNEIDNILRNKPYSKKDYRS :::::..: ...:::.:: ::::::::::: CCDS55 QVLPKLSSSIIHEIDSILGNKPYSKKDYRS 280 290 300 >>CCDS77845.1 KCNAB1 gene_id:7881|Hs108|chr3 (372 aa) initn: 1353 init1: 1353 opt: 1354 Z-score: 1713.5 bits: 325.8 E(32554): 4e-89 Smith-Waterman score: 2371; 92.8% identity (92.8% similar) in 401 aa overlap (1-401:1-372) 10 20 30 40 50 60 pF1KE4 MQVSIACTEHNLKSRNGEDRLLSKQSSTAPNVVNAARAKFRTVAIIARSLGTFTPQHHIS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 MQVSIACTEHNLKSRNGEDRLLSKQSSTAPNVVNAARAKFRTVAIIARSLGTFTPQHHIS 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 LKESTAKQTGMKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 LKESTAKQTGMKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 AEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQR ::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 AEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHII--------- 130 140 150 160 170 190 200 210 220 230 240 pF1KE4 LQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFN :::::::::::::::::::::::::::::::::::::::: CCDS77 --------------------EEIVRAMTHVINQGMAMYWGTSRWSAMEIMEAYSVARQFN 180 190 200 210 250 260 270 280 290 300 pF1KE4 MIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 MIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGNGVPESSRAS 220 230 240 250 260 270 310 320 330 340 350 360 pF1KE4 LKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 LKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGVSSVLLGSST 280 290 300 310 320 330 370 380 390 400 pF1KE4 PEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKKDYRS ::::::::::::::::::::::::::::::::::::::::: CCDS77 PEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKKDYRS 340 350 360 370 >>CCDS77844.1 KCNAB1 gene_id:7881|Hs108|chr3 (390 aa) initn: 1353 init1: 1353 opt: 1354 Z-score: 1713.2 bits: 325.8 E(32554): 4.2e-89 Smith-Waterman score: 1956; 82.1% identity (86.8% similar) in 380 aa overlap (23-401:42-390) 10 20 30 40 50 pF1KE4 MQVSIACTEHNLKSRNGEDRLLSKQSSTAPNVVNAARAKFRTVAIIAR-SLG .:.:: .:. . :: : .:.. . .. CCDS77 QISEENTKLRRQSGFSVAGKDKSPKKASENAKDSSLSPSGESQLRA--RQLALLREVEMN 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 TFTPQHHISLKESTAKQTGMKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAY . .: ...:. ::: .:::::::::::::::::::::::::::::::::::::: CCDS77 WYLKLCDLSSEHTTVCTTGMPHRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAY 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 ESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHII :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 ESGVNLFDTAEVYAAGKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHII 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE4 EGLKGSLQRLQLEYVDVVFANRPDSNTPMEEIVRAMTHVINQGMAMYWGTSRWSAMEIME : :::::::::::::::::::::::::::::: CCDS77 E-----------------------------EIVRAMTHVINQGMAMYWGTSRWSAMEIME 190 200 210 220 240 250 260 270 280 290 pF1KE4 AYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 AYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGN 230 240 250 260 270 280 300 310 320 330 340 350 pF1KE4 GVPESSRASLKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 GVPESSRASLKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGV 290 300 310 320 330 340 360 370 380 390 400 pF1KE4 SSVLLGSSTPEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKKDYRS :::::::::::::::::::::::::::::::::::::::::::::::::: CCDS77 SSVLLGSSTPEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKKDYRS 350 360 370 380 390 >>CCDS55570.1 KCNAB2 gene_id:8514|Hs108|chr1 (415 aa) initn: 1161 init1: 1161 opt: 1163 Z-score: 1471.2 bits: 281.2 E(32554): 1.3e-75 Smith-Waterman score: 1966; 77.1% identity (89.7% similar) in 380 aa overlap (39-401:36-415) 10 20 30 40 50 60 pF1KE4 EHNLKSRNGEDRLLSKQSSTAPNVVNAARAKFRTV--AIIARSLGTFTPQHHISLKESTA ..: : : ::.. .: .: .:: :: CCDS55 YSESLRSVSSRCHSEWALHPVRQTDTLELQRLREVRAAAQARNMESFLRMHGLSLDGCTA 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 KQTGMKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAA ..::::::::::::::::::::::::::::::.::.::.:::.::..:.::::::::::: CCDS55 QRTGMKYRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAA 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 GKAEVILGSIIKKKGWRRSSLVITTKLYWGGKAETERGLSRKHIIEGLKGSLQRLQLEYV :::::.::.:::::::::::::::::..:::::::::::::::::::::.::.::::::: CCDS55 GKAEVVLGNIIKKKGWRRSSLVITTKIFWGGKAETERGLSRKHIIEGLKASLERLQLEYV 130 140 150 160 170 180 190 200 210 220 230 pF1KE4 DVVFANRPDSNTPME---------------EIVRAMTHVINQGMAMYWGTSRWSAMEIME ::::::::: ::::: : ::::::::::::::::::::::.::::: CCDS55 DVVFANRPDPNTPMEGDPFSSSKSRTFIIEETVRAMTHVINQGMAMYWGTSRWSSMEIME 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE4 AYSVARQFNMIPPVCEQAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKYGN :::::::::. ::.:::::::.:::::::::::::.:::::::::::::::::.:::: . CCDS55 AYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDS 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE4 GVPESSRASLKCYQWLKERIVSEEGRKQQNKLKDLSPIAERLGCTLPQLAVAWCLRNEGV :.: :::::: :::::..:.:::::.:: :::.:. :::::::::::::.::::::::: CCDS55 GIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGV 310 320 330 340 350 360 360 370 380 390 400 pF1KE4 SSVLLGSSTPEQLIENLGAIQVLPKMTSHVVNEIDNILRNKPYSKKDYRS ::::::.:. .::.::.::::::::..: ...:::.:: ::::::::::: CCDS55 SSVLLGASNADQLMENIGAIQVLPKLSSSIIHEIDSILGNKPYSKKDYRS 370 380 390 400 410 401 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sat Nov 5 22:59:14 2016 done: Sat Nov 5 22:59:15 2016 Total Scan time: 2.620 Total Display time: 0.060 Function used was FASTA [36.3.4 Apr, 2011]