FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6612, 311 aa 1>>>pF1KE6612 311 - 311 aa - 311 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5238+/-0.000383; mu= 14.2924+/- 0.024 mean_var=66.2590+/-13.539, 0's: 0 Z-trim(111.6): 38 B-trim: 1190 in 1/47 Lambda= 0.157562 statistics sampled from 20236 (20270) to 20236 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.612), E-opt: 0.2 (0.238), width: 16 Scan time: 5.300 The best scores are: opt bits E(85289) NP_653318 (OMIM: 605621) interleukin-20 receptor s ( 311) 2103 487.1 2e-137 XP_011511212 (OMIM: 605621) PREDICTED: interleukin ( 316) 1900 440.9 1.6e-123 XP_016862121 (OMIM: 605621) PREDICTED: interleukin ( 264) 1790 415.9 4.5e-116 XP_006713728 (OMIM: 605621) PREDICTED: interleukin ( 264) 1790 415.9 4.5e-116 XP_011511213 (OMIM: 605621) PREDICTED: interleukin ( 264) 1790 415.9 4.5e-116 NP_005525 (OMIM: 147569,614889) interferon gamma r ( 337) 191 52.4 1.5e-06 NP_775087 (OMIM: 607404) interferon lambda recepto ( 491) 192 52.7 1.7e-06 NP_734464 (OMIM: 607404) interferon lambda recepto ( 520) 192 52.8 1.8e-06 NP_000619 (OMIM: 123889,610424,612567) interleukin ( 325) 184 50.8 4.3e-06 NP_775088 (OMIM: 607404) interferon lambda recepto ( 244) 180 49.9 6.2e-06 NP_001316057 (OMIM: 147569,614889) interferon gamm ( 356) 176 49.0 1.6e-05 XP_011527856 (OMIM: 147569,614889) PREDICTED: inte ( 339) 170 47.7 4e-05 XP_011527855 (OMIM: 147569,614889) PREDICTED: inte ( 362) 170 47.7 4.2e-05 NP_055247 (OMIM: 605620) interleukin-20 receptor s ( 553) 166 46.9 0.00012 XP_016866443 (OMIM: 605620) PREDICTED: interleukin ( 554) 163 46.2 0.00019 XP_005261021 (OMIM: 107450) PREDICTED: interferon ( 488) 148 42.7 0.0018 NP_000620 (OMIM: 107450) interferon alpha/beta rec ( 557) 148 42.8 0.002 NP_001549 (OMIM: 146933,613148) interleukin-10 rec ( 578) 143 41.6 0.0045 NP_851827 (OMIM: 606648) interleukin-22 receptor s ( 130) 134 39.3 0.0051 >>NP_653318 (OMIM: 605621) interleukin-20 receptor subun (311 aa) initn: 2103 init1: 2103 opt: 2103 Z-score: 2588.2 bits: 487.1 E(85289): 2e-137 Smith-Waterman score: 2103; 100.0% identity (100.0% similar) in 311 aa overlap (1-311:1-311) 10 20 30 40 50 60 pF1KE6 MQTFTMVLEEIWTSLFMWFFYALIPCLLTDEVAILPAPQNLSVLSTNMKHLLMWSPVIAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_653 MQTFTMVLEEIWTSLFMWFFYALIPCLLTDEVAILPAPQNLSVLSTNMKHLLMWSPVIAP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 GETVYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPECDVTDDITATVPYNLRVRATLGSQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_653 GETVYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPECDVTDDITATVPYNLRVRATLGSQ 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 TSAWSILKHPFNRNSTILTRPGMEITKDGFHLVIELEDLGPQFEFLVAYWRREPGAEEHV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_653 TSAWSILKHPFNRNSTILTRPGMEITKDGFHLVIELEDLGPQFEFLVAYWRREPGAEEHV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 KMVRSGGIPVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQTECVEVQGEAIPLVLALFAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_653 KMVRSGGIPVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQTECVEVQGEAIPLVLALFAF 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE6 VGFMLILVVVPLFVWKMGRLLQYSCCPVVVLPDTLKITNSPQKLISCRREEVDACATAVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_653 VGFMLILVVVPLFVWKMGRLLQYSCCPVVVLPDTLKITNSPQKLISCRREEVDACATAVM 250 260 270 280 290 300 310 pF1KE6 SPEELLRAWIS ::::::::::: NP_653 SPEELLRAWIS 310 >>XP_011511212 (OMIM: 605621) PREDICTED: interleukin-20 (316 aa) initn: 1900 init1: 1900 opt: 1900 Z-score: 2338.8 bits: 440.9 E(85289): 1.6e-123 Smith-Waterman score: 1900; 100.0% identity (100.0% similar) in 282 aa overlap (30-311:35-316) 10 20 30 40 50 pF1KE6 MQTFTMVLEEIWTSLFMWFFYALIPCLLTDEVAILPAPQNLSVLSTNMKHLLMWSPVIA :::::::::::::::::::::::::::::: XP_011 KPSIFRLDIFFNDARLISIFLKTPVLNRSGDEVAILPAPQNLSVLSTNMKHLLMWSPVIA 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE6 PGETVYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPECDVTDDITATVPYNLRVRATLGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PGETVYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPECDVTDDITATVPYNLRVRATLGS 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE6 QTSAWSILKHPFNRNSTILTRPGMEITKDGFHLVIELEDLGPQFEFLVAYWRREPGAEEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 QTSAWSILKHPFNRNSTILTRPGMEITKDGFHLVIELEDLGPQFEFLVAYWRREPGAEEH 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE6 VKMVRSGGIPVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQTECVEVQGEAIPLVLALFA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VKMVRSGGIPVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQTECVEVQGEAIPLVLALFA 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE6 FVGFMLILVVVPLFVWKMGRLLQYSCCPVVVLPDTLKITNSPQKLISCRREEVDACATAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 FVGFMLILVVVPLFVWKMGRLLQYSCCPVVVLPDTLKITNSPQKLISCRREEVDACATAV 250 260 270 280 290 300 300 310 pF1KE6 MSPEELLRAWIS :::::::::::: XP_011 MSPEELLRAWIS 310 >>XP_016862121 (OMIM: 605621) PREDICTED: interleukin-20 (264 aa) initn: 1790 init1: 1790 opt: 1790 Z-score: 2204.8 bits: 415.9 E(85289): 4.5e-116 Smith-Waterman score: 1790; 100.0% identity (100.0% similar) in 264 aa overlap (48-311:1-264) 20 30 40 50 60 70 pF1KE6 WFFYALIPCLLTDEVAILPAPQNLSVLSTNMKHLLMWSPVIAPGETVYYSVEYQGEYESL :::::::::::::::::::::::::::::: XP_016 MKHLLMWSPVIAPGETVYYSVEYQGEYESL 10 20 30 80 90 100 110 120 130 pF1KE6 YTSHIWIPSSWCSLTEGPECDVTDDITATVPYNLRVRATLGSQTSAWSILKHPFNRNSTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 YTSHIWIPSSWCSLTEGPECDVTDDITATVPYNLRVRATLGSQTSAWSILKHPFNRNSTI 40 50 60 70 80 90 140 150 160 170 180 190 pF1KE6 LTRPGMEITKDGFHLVIELEDLGPQFEFLVAYWRREPGAEEHVKMVRSGGIPVHLETMEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 LTRPGMEITKDGFHLVIELEDLGPQFEFLVAYWRREPGAEEHVKMVRSGGIPVHLETMEP 100 110 120 130 140 150 200 210 220 230 240 250 pF1KE6 GAAYCVKAQTFVKAIGRYSAFSQTECVEVQGEAIPLVLALFAFVGFMLILVVVPLFVWKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GAAYCVKAQTFVKAIGRYSAFSQTECVEVQGEAIPLVLALFAFVGFMLILVVVPLFVWKM 160 170 180 190 200 210 260 270 280 290 300 310 pF1KE6 GRLLQYSCCPVVVLPDTLKITNSPQKLISCRREEVDACATAVMSPEELLRAWIS :::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 GRLLQYSCCPVVVLPDTLKITNSPQKLISCRREEVDACATAVMSPEELLRAWIS 220 230 240 250 260 >>XP_006713728 (OMIM: 605621) PREDICTED: interleukin-20 (264 aa) initn: 1790 init1: 1790 opt: 1790 Z-score: 2204.8 bits: 415.9 E(85289): 4.5e-116 Smith-Waterman score: 1790; 100.0% identity (100.0% similar) in 264 aa overlap (48-311:1-264) 20 30 40 50 60 70 pF1KE6 WFFYALIPCLLTDEVAILPAPQNLSVLSTNMKHLLMWSPVIAPGETVYYSVEYQGEYESL :::::::::::::::::::::::::::::: XP_006 MKHLLMWSPVIAPGETVYYSVEYQGEYESL 10 20 30 80 90 100 110 120 130 pF1KE6 YTSHIWIPSSWCSLTEGPECDVTDDITATVPYNLRVRATLGSQTSAWSILKHPFNRNSTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 YTSHIWIPSSWCSLTEGPECDVTDDITATVPYNLRVRATLGSQTSAWSILKHPFNRNSTI 40 50 60 70 80 90 140 150 160 170 180 190 pF1KE6 LTRPGMEITKDGFHLVIELEDLGPQFEFLVAYWRREPGAEEHVKMVRSGGIPVHLETMEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 LTRPGMEITKDGFHLVIELEDLGPQFEFLVAYWRREPGAEEHVKMVRSGGIPVHLETMEP 100 110 120 130 140 150 200 210 220 230 240 250 pF1KE6 GAAYCVKAQTFVKAIGRYSAFSQTECVEVQGEAIPLVLALFAFVGFMLILVVVPLFVWKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 GAAYCVKAQTFVKAIGRYSAFSQTECVEVQGEAIPLVLALFAFVGFMLILVVVPLFVWKM 160 170 180 190 200 210 260 270 280 290 300 310 pF1KE6 GRLLQYSCCPVVVLPDTLKITNSPQKLISCRREEVDACATAVMSPEELLRAWIS :::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 GRLLQYSCCPVVVLPDTLKITNSPQKLISCRREEVDACATAVMSPEELLRAWIS 220 230 240 250 260 >>XP_011511213 (OMIM: 605621) PREDICTED: interleukin-20 (264 aa) initn: 1790 init1: 1790 opt: 1790 Z-score: 2204.8 bits: 415.9 E(85289): 4.5e-116 Smith-Waterman score: 1790; 100.0% identity (100.0% similar) in 264 aa overlap (48-311:1-264) 20 30 40 50 60 70 pF1KE6 WFFYALIPCLLTDEVAILPAPQNLSVLSTNMKHLLMWSPVIAPGETVYYSVEYQGEYESL :::::::::::::::::::::::::::::: XP_011 MKHLLMWSPVIAPGETVYYSVEYQGEYESL 10 20 30 80 90 100 110 120 130 pF1KE6 YTSHIWIPSSWCSLTEGPECDVTDDITATVPYNLRVRATLGSQTSAWSILKHPFNRNSTI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 YTSHIWIPSSWCSLTEGPECDVTDDITATVPYNLRVRATLGSQTSAWSILKHPFNRNSTI 40 50 60 70 80 90 140 150 160 170 180 190 pF1KE6 LTRPGMEITKDGFHLVIELEDLGPQFEFLVAYWRREPGAEEHVKMVRSGGIPVHLETMEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 LTRPGMEITKDGFHLVIELEDLGPQFEFLVAYWRREPGAEEHVKMVRSGGIPVHLETMEP 100 110 120 130 140 150 200 210 220 230 240 250 pF1KE6 GAAYCVKAQTFVKAIGRYSAFSQTECVEVQGEAIPLVLALFAFVGFMLILVVVPLFVWKM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GAAYCVKAQTFVKAIGRYSAFSQTECVEVQGEAIPLVLALFAFVGFMLILVVVPLFVWKM 160 170 180 190 200 210 260 270 280 290 300 310 pF1KE6 GRLLQYSCCPVVVLPDTLKITNSPQKLISCRREEVDACATAVMSPEELLRAWIS :::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 GRLLQYSCCPVVVLPDTLKITNSPQKLISCRREEVDACATAVMSPEELLRAWIS 220 230 240 250 260 >>NP_005525 (OMIM: 147569,614889) interferon gamma recep (337 aa) initn: 122 init1: 77 opt: 191 Z-score: 238.8 bits: 52.4 E(85289): 1.5e-06 Smith-Waterman score: 262; 27.0% identity (54.3% similar) in 278 aa overlap (11-263:6-279) 10 20 30 40 50 60 pF1KE6 MQTFTMVLEEIWTSLFMWFFYALIPCLLTDEVAILPAPQNLSVLSTNMKHLLMWSPVIAP .:. :.. .: : .. :::::. .. : ...: : :: NP_005 MRPTLLWSLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALS 10 20 30 40 50 70 80 90 100 110 pF1KE6 GET--VYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPECDVTD-DITATVPYN----LRV . : : :.:... . .:. : . :. . ::: : . .: :.. ::. NP_005 NSTRPVVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRL 60 70 80 90 100 110 120 130 140 150 160 pF1KE6 RATLGSQTSAWSILK-HPFNRNSTILTRPGMEITKDGFHLVIELE---DLGPQ----FEF :: ::. ::: . :: :. ..:.: :.:.. :.. : . NP_005 RAELGALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSPFDIADTSTAFFCY 120 130 140 150 160 170 170 180 190 200 210 220 pF1KE6 LVAYWRREPGAEEHVKM-VRSGGIPVHLETMEPGAAYCVKAQTFV----KAIGRYSAFSQ : :: : :. ..:: ::..: :....:. .::...:. . . : : . .:. NP_005 YVHYW--EKGGIQQVKGPFRSNSIS--LDNLKPSRVYCLQVQAQLLWNKSNIFRVGHLSN 180 190 200 210 220 230 230 240 250 260 270 pF1KE6 TECVEVQGEA-IPLVLALFAFVGFMLILVVVP----LFVWKMGRLLQYSCCPVVVLPDTL : :....: : ... :: . .: :. ..: :. :..: NP_005 ISCYETMADASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWFHTPPSIPLQI 240 250 260 270 280 290 280 290 300 310 pF1KE6 KITNSPQKLISCRREEVDACATAVMSPEELLRAWIS NP_005 EEYLKDPTQPILEALDKDSSPKDDVWDSVSIISFPEKEQEDVLQTL 300 310 320 330 >>NP_775087 (OMIM: 607404) interferon lambda receptor 1 (491 aa) initn: 135 init1: 90 opt: 192 Z-score: 237.5 bits: 52.7 E(85289): 1.7e-06 Smith-Waterman score: 192; 26.2% identity (53.9% similar) in 256 aa overlap (23-258:10-254) 10 20 30 40 50 pF1KE6 MQTFTMVLEEIWTSLFMWFFYALIPCLLTDEVAI--LPAPQNLSVLSTNMKHLLMWSPVI :. ::: . : :::...:: :.. : : : . NP_775 MAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGL 10 20 30 40 60 70 80 90 100 110 pF1KE6 APGETVYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPECDVT----DDITATVPYNLRVR . . : : : :: : : . : :. :. :.. .:. .. ::: NP_775 GNPQDVTYFVAYQ----SSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNK--FKGRVR 50 60 70 80 90 100 120 130 140 150 160 pF1KE6 ATLGSQTSAW---SILKHPFNRNST----ILTRPGMEITKDG-FHLVIELEDLGPQFEFL .. :. : : : . :. . . .::. .. .. ..: . : ..: NP_775 TVSPSSKSPWVESEYLDYLFEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYE-- 110 120 130 140 150 170 180 190 200 210 220 pF1KE6 VAYWRREPGAEEHVKMVRSGGIPVHLETMEPGAA--YCVKAQT-FVKAIGRYSAFSQTEC ::.:.. : . : : ::.. :..:.:. .:..:.: .. .. .:: ::. : NP_775 VAFWKEGAGNKTLFP-VTPHGQPVQI-TLQPAASEHHCLSARTIYTFSVPKYSKFSKPTC 160 170 180 190 200 210 230 240 250 260 270 280 pF1KE6 VEVQ-GEAIPLVLALFAFVGFMLILVVVPLFVWK--MGRLLQYSCCPVVVLPDTLKITNS .. :: :.: ... ..:..... .:: :: NP_775 FLLEVPEANWAFLVLPSLL-ILLLVIAAGGVIWKTLMGNPWFQRAKMPRALELTRGVRPT 220 230 240 250 260 270 290 300 310 pF1KE6 PQKLISCRREEVDACATAVMSPEELLRAWIS NP_775 PRVRAPATQQTRWKKDLAEDEEEEDEEDTEDGVSFQPYIEPPSFLGQEHQAPGHSEAGGV 280 290 300 310 320 330 >>NP_734464 (OMIM: 607404) interferon lambda receptor 1 (520 aa) initn: 135 init1: 90 opt: 192 Z-score: 237.1 bits: 52.8 E(85289): 1.8e-06 Smith-Waterman score: 192; 26.2% identity (53.9% similar) in 256 aa overlap (23-258:10-254) 10 20 30 40 50 pF1KE6 MQTFTMVLEEIWTSLFMWFFYALIPCLLTDEVAI--LPAPQNLSVLSTNMKHLLMWSPVI :. ::: . : :::...:: :.. : : : . NP_734 MAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGL 10 20 30 40 60 70 80 90 100 110 pF1KE6 APGETVYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPECDVT----DDITATVPYNLRVR . . : : : :: : : . : :. :. :.. .:. .. ::: NP_734 GNPQDVTYFVAYQ----SSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNK--FKGRVR 50 60 70 80 90 100 120 130 140 150 160 pF1KE6 ATLGSQTSAW---SILKHPFNRNST----ILTRPGMEITKDG-FHLVIELEDLGPQFEFL .. :. : : : . :. . . .::. .. .. ..: . : ..: NP_734 TVSPSSKSPWVESEYLDYLFEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYE-- 110 120 130 140 150 170 180 190 200 210 220 pF1KE6 VAYWRREPGAEEHVKMVRSGGIPVHLETMEPGAA--YCVKAQT-FVKAIGRYSAFSQTEC ::.:.. : . : : ::.. :..:.:. .:..:.: .. .. .:: ::. : NP_734 VAFWKEGAGNKTLFP-VTPHGQPVQI-TLQPAASEHHCLSARTIYTFSVPKYSKFSKPTC 160 170 180 190 200 210 230 240 250 260 270 280 pF1KE6 VEVQ-GEAIPLVLALFAFVGFMLILVVVPLFVWK--MGRLLQYSCCPVVVLPDTLKITNS .. :: :.: ... ..:..... .:: :: NP_734 FLLEVPEANWAFLVLPSLL-ILLLVIAAGGVIWKTLMGNPWFQRAKMPRALDFSGHTHPV 220 230 240 250 260 270 290 300 310 pF1KE6 PQKLISCRREEVDACATAVMSPEELLRAWIS NP_734 ATFQPSRPESVNDLFLCPQKELTRGVRPTPRVRAPATQQTRWKKDLAEDEEEEDEEDTED 280 290 300 310 320 330 >>NP_000619 (OMIM: 123889,610424,612567) interleukin-10 (325 aa) initn: 106 init1: 49 opt: 184 Z-score: 230.4 bits: 50.8 E(85289): 4.3e-06 Smith-Waterman score: 279; 26.6% identity (58.0% similar) in 286 aa overlap (12-276:3-267) 10 20 30 40 50 pF1KE6 MQTFTMVLEEIWTSLFMWFFYALIPCLLTDEVAILPAPQNLSVLSTNMKHLLMW-SPVIA : :: : : :::.. ....: :.:. . :.:.:..:.: ::..: NP_000 MAW-SLGSW----LGGCLLVSALGMVPPPENVRMNSVNFKNILQWESPAFA 10 20 30 40 60 70 80 90 100 110 pF1KE6 PGETVYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPECDVTDDITATVPYNLRVRATLGS : .. . ..: : : .. : : ::: .. .. ..::::: ... NP_000 KG-----NLTFTAQYLSYR-----IFQDKCMNTTLTECDFSS-LSKYGDHTLRVRAEFAD 50 60 70 80 90 120 130 140 150 160 pF1KE6 QTSAW-SILKHPFNRNSTILTRPGM--EITKDGFHLV-----IE-------LEDLGPQFE . : : .: : . .::. ::: :. :..:. :: .... .. NP_000 EHSDWVNITFCPVD--DTIIGPPGMQVEVLADSLHMRFLAPKIENEYETWTMKNVYNSWT 100 110 120 130 140 150 170 180 190 200 210 220 pF1KE6 FLVAYWRREPGAEEHVKMVRSGGIPVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQTECV . : ::. :..:. ... . . : :...:: ..:::... :. .. . .:. : NP_000 YNVQYWKN--GTDEKFQITPQYDFEV-LRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCE 160 170 180 190 200 210 230 240 250 260 270 pF1KE6 EV-QGEAIP--LVLALFAFVGFMLILVVVPLF--VWKMGRLLQYSCCPVVVLPDTLKITN .. . :..: .: ... ::. :... : .: . . .:. : ::. :: NP_000 QTTHDETVPSWMVAVILMASVFMVCLALLGCFALLWCVYKKTKYAFSPRNSLPQHLKEFL 220 230 240 250 260 270 280 290 300 310 pF1KE6 SPQKLISCRREEVDACATAVMSPEELLRAWIS NP_000 GHPHHNTLLFFSFPLSDENDVFDKLSVIAEDSESGKQNPGDSCSLGTPPGQGPQS 280 290 300 310 320 >>NP_775088 (OMIM: 607404) interferon lambda receptor 1 (244 aa) initn: 114 init1: 90 opt: 180 Z-score: 227.5 bits: 49.9 E(85289): 6.2e-06 Smith-Waterman score: 180; 27.1% identity (52.9% similar) in 225 aa overlap (23-228:10-224) 10 20 30 40 50 pF1KE6 MQTFTMVLEEIWTSLFMWFFYALIPCLLTDEVAI--LPAPQNLSVLSTNMKHLLMWSPVI :. ::: . : :::...:: :.. : : : . NP_775 MAGPERWGPLLLCLLQAAPGRPRLAPPQNVTLLSQNFSVYLTWLPGL 10 20 30 40 60 70 80 90 100 110 pF1KE6 APGETVYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPECDVT----DDITATVPYNLRVR . . : : : :: : : . : :. :. :.. .:. .. ::: NP_775 GNPQDVTYFVAYQ----SSPTRRRWREVEECAGTKELLCSMMCLKKQDLYNK--FKGRVR 50 60 70 80 90 100 120 130 140 150 160 pF1KE6 ATLGSQTSAW---SILKHPFNRNST----ILTRPGMEITKDG-FHLVIELEDLGPQFEFL .. :. : : : . :. . . .::. .. .. ..: . : ..: NP_775 TVSPSSKSPWVESEYLDYLFEVEPAPPVLVLTQTEEILSANATYQLPPCMPPLDLKYE-- 110 120 130 140 150 170 180 190 200 210 220 pF1KE6 VAYWRREPGAEEHVKMVRSGGIPVHLETMEPGAA--YCVKAQT-FVKAIGRYSAFSQTEC ::.:.. : . : : ::.. :..:.:. .:..:.: .. .. .:: ::. : NP_775 VAFWKEGAGNKTLFP-VTPHGQPVQI-TLQPAASEHHCLSARTIYTFSVPKYSKFSKPTC 160 170 180 190 200 210 230 240 250 260 270 280 pF1KE6 --VEVQGEAIPLVLALFAFVGFMLILVVVPLFVWKMGRLLQYSCCPVVVLPDTLKITNSP .:: : NP_775 FLLEVPGLFWTHTPCGNLSAQQTRVRE 220 230 240 311 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:46:12 2016 done: Tue Nov 8 14:46:12 2016 Total Scan time: 5.300 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]