FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3287, 740 aa 1>>>pF1KE3287 740 - 740 aa - 740 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.0274+/-0.00046; mu= 18.2601+/- 0.029 mean_var=131.1043+/-26.572, 0's: 0 Z-trim(113.7): 151 B-trim: 960 in 2/50 Lambda= 0.112012 statistics sampled from 22945 (23117) to 22945 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.628), E-opt: 0.2 (0.271), width: 16 Scan time: 9.470 The best scores are: opt bits E(85289) NP_612144 (OMIM: 613143) E3 ubiquitin-protein liga ( 740) 4918 807.1 0 NP_001273175 (OMIM: 613142) probable E3 ubiquitin- ( 347) 751 133.4 1.5e-30 NP_848597 (OMIM: 613142) probable E3 ubiquitin-pro ( 347) 751 133.4 1.5e-30 XP_011536324 (OMIM: 613142) PREDICTED: probable E3 ( 347) 751 133.4 1.5e-30 XP_005268760 (OMIM: 613142) PREDICTED: probable E3 ( 347) 751 133.4 1.5e-30 XP_005268755 (OMIM: 613142) PREDICTED: probable E3 ( 350) 751 133.4 1.5e-30 XP_005268754 (OMIM: 613142) PREDICTED: probable E3 ( 350) 751 133.4 1.5e-30 XP_005268757 (OMIM: 613142) PREDICTED: probable E3 ( 350) 751 133.4 1.5e-30 NP_001273174 (OMIM: 613142) probable E3 ubiquitin- ( 350) 751 133.4 1.5e-30 XP_016867215 (OMIM: 613141) PREDICTED: probable E3 ( 575) 521 96.5 3.3e-19 NP_001096066 (OMIM: 613141) probable E3 ubiquitin- ( 575) 521 96.5 3.3e-19 XP_016867216 (OMIM: 613141) PREDICTED: probable E3 ( 575) 521 96.5 3.3e-19 XP_016867212 (OMIM: 613141) PREDICTED: probable E3 ( 622) 521 96.5 3.5e-19 NP_001096065 (OMIM: 613141) probable E3 ubiquitin- ( 622) 521 96.5 3.5e-19 XP_011514074 (OMIM: 613141) PREDICTED: probable E3 ( 622) 521 96.5 3.5e-19 XP_011514076 (OMIM: 613141) PREDICTED: probable E3 ( 622) 521 96.5 3.5e-19 NP_001096064 (OMIM: 613141) probable E3 ubiquitin- ( 622) 521 96.5 3.5e-19 XP_016867213 (OMIM: 613141) PREDICTED: probable E3 ( 622) 521 96.5 3.5e-19 XP_005250188 (OMIM: 613141) PREDICTED: probable E3 ( 622) 521 96.5 3.5e-19 NP_065943 (OMIM: 613141) probable E3 ubiquitin-pro ( 622) 521 96.5 3.5e-19 XP_005250189 (OMIM: 613141) PREDICTED: probable E3 ( 622) 521 96.5 3.5e-19 XP_016867214 (OMIM: 613141) PREDICTED: probable E3 ( 622) 521 96.5 3.5e-19 XP_011514077 (OMIM: 613141) PREDICTED: probable E3 ( 622) 521 96.5 3.5e-19 XP_011514075 (OMIM: 613141) PREDICTED: probable E3 ( 622) 521 96.5 3.5e-19 XP_006718546 (OMIM: 616110) PREDICTED: E3 ubiquiti ( 513) 508 94.3 1.3e-18 NP_001287656 (OMIM: 616110) E3 ubiquitin-protein l ( 513) 508 94.3 1.3e-18 NP_055992 (OMIM: 616110) E3 ubiquitin-protein liga ( 619) 508 94.4 1.5e-18 XP_011536311 (OMIM: 602582) PREDICTED: E3 ubiquiti ( 620) 498 92.8 4.6e-18 NP_004407 (OMIM: 602582) E3 ubiquitin-protein liga ( 620) 498 92.8 4.6e-18 XP_016867217 (OMIM: 613141) PREDICTED: probable E3 ( 568) 333 66.1 4.6e-10 >>NP_612144 (OMIM: 613143) E3 ubiquitin-protein ligase D (740 aa) initn: 4918 init1: 4918 opt: 4918 Z-score: 4304.6 bits: 807.1 E(85289): 0 Smith-Waterman score: 4918; 100.0% identity (100.0% similar) in 740 aa overlap (1-740:1-740) 10 20 30 40 50 60 pF1KE3 MASHLRPPSPLLVRVYKSGPRVRRKLESYFQSSKSSGGGECTVSTQEHEAPGTFRVEFSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 MASHLRPPSPLLVRVYKSGPRVRRKLESYFQSSKSSGGGECTVSTQEHEAPGTFRVEFSE 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 RAAKERVLKKGEHQILVDEKPVPIFLVPTENSIKKNTRPQISSLTQSQAETPSGDMHQHE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 RAAKERVLKKGEHQILVDEKPVPIFLVPTENSIKKNTRPQISSLTQSQAETPSGDMHQHE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 GHIPNAVDSCLQKIFLTVTADLNCNLFSKEQRAYITTLCPSIRKMEGHDGIEKVCGDFQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 GHIPNAVDSCLQKIFLTVTADLNCNLFSKEQRAYITTLCPSIRKMEGHDGIEKVCGDFQD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 IERIHQFLSEQFLESEQKQQFSPSMTERKPLSQQERDSCISPSEPETKAEQKSNYFEVPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 IERIHQFLSEQFLESEQKQQFSPSMTERKPLSQQERDSCISPSEPETKAEQKSNYFEVPL 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 PYFEYFKYICPDKINSIEKRFGVNIEIQESSPNMVCLDFTSSRSGDLEAARESFASEFQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 PYFEYFKYICPDKINSIEKRFGVNIEIQESSPNMVCLDFTSSRSGDLEAARESFASEFQK 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 NTEPLKQECVSLADSKQANKFKQELNHQFTKLLIKEKGGELTLLGTQDDISAAKQKISEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 NTEPLKQECVSLADSKQANKFKQELNHQFTKLLIKEKGGELTLLGTQDDISAAKQKISEA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE3 FVKIPVKLFAANYMMNVIEVDSAHYKLLETELLQEISEIEKRYDICSKVSEKGQKTCILF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 FVKIPVKLFAANYMMNVIEVDSAHYKLLETELLQEISEIEKRYDICSKVSEKGQKTCILF 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE3 ESKDRQVDLSVHAYASFIDAFQHASCQLMREVLLLKSLGKERKHLHQTKFADDFRKRHPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 ESKDRQVDLSVHAYASFIDAFQHASCQLMREVLLLKSLGKERKHLHQTKFADDFRKRHPN 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE3 VHFVLNQESMTLTGLPNHLAKAKQYVLKGGGMSSLAGKKLKEGHETPMDIDSDDSKAASP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 VHFVLNQESMTLTGLPNHLAKAKQYVLKGGGMSSLAGKKLKEGHETPMDIDSDDSKAASP 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE3 PLKGSVSSEASELDKKEKGICVICMDTISNKKVLPKCKHEFCAPCINKAMSYKPICPTCQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 PLKGSVSSEASELDKKEKGICVICMDTISNKKVLPKCKHEFCAPCINKAMSYKPICPTCQ 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE3 TSYGIQKGNQPEGSMVFTVSRDSLPGYESFGTIVITYSMKAGIQTEEHPNPGKRYPGIQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 TSYGIQKGNQPEGSMVFTVSRDSLPGYESFGTIVITYSMKAGIQTEEHPNPGKRYPGIQR 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE3 TAYLPDNKEGRKVLKLLYRAFDQKLIFTVGYSRVLGVSDVITWNDIHHKTSRFGGPEMYG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_612 TAYLPDNKEGRKVLKLLYRAFDQKLIFTVGYSRVLGVSDVITWNDIHHKTSRFGGPEMYG 670 680 690 700 710 720 730 740 pF1KE3 YPDPSYLKRVKEELKAKGIE :::::::::::::::::::: NP_612 YPDPSYLKRVKEELKAKGIE 730 740 >>NP_001273175 (OMIM: 613142) probable E3 ubiquitin-prot (347 aa) initn: 742 init1: 532 opt: 751 Z-score: 669.3 bits: 133.4 E(85289): 1.5e-30 Smith-Waterman score: 751; 53.4% identity (71.6% similar) in 204 aa overlap (540-739:143-344) 510 520 530 540 550 560 pF1KE3 GGMSSLAGKKLKEGHETPMDIDSDDSKAASPPLKGSVSSEASELDKKEKGICVICMDTIS ::: . . : ..... : ::. :. NP_001 EHPEMHRAGPPPLRAAPLLPPGARGLPPPPPPLPPPLPPRLREEAEEQESTCPICLGEIQ 120 130 140 150 160 170 570 580 590 600 610 620 pF1KE3 NKKVLPKCKHEFCAPCINKAMSYKPICPTCQTSYGIQKGNQPE-GSMVFTVSRDS---LP : :.: ::.: :: ::..:.. : :: : :: ::::. : :. ::.:. :: NP_001 NAKTLEKCRHSFCEGCITRALQVKKACPMCGRFYGQLVGNQPQNGRML--VSKDATLLLP 180 190 200 210 220 230 630 640 650 660 670 680 pF1KE3 GYESFGTIVITYSMKAGIQTEEHPNPGKRYPGIQRTAYLPDNKEGRKVLKLLYRAFDQKL .::..::::: : . :.: :::::: :::: :.::::: :: ::: :. .::::.: NP_001 SYEKYGTIVIQYVFPPGVQGAEHPNPGVRYPGTTRVAYLPDCPEGNKVLTLFRKAFDQRL 240 250 260 270 280 290 690 700 710 720 730 740 pF1KE3 IFTVGYSRVLGVSDVITWNDIHHKTSRFGGPEMYGYPDPSYLKRVKEELKAKGIE ::.: : . : .:::::::::::: :::...:::::.:: ::.:::.:::: NP_001 TFTIGTSMTTGRPNVITWNDIHHKTSCTGGPQLFGYPDPTYLTRVQEELRAKGITDD 300 310 320 330 340 >>NP_848597 (OMIM: 613142) probable E3 ubiquitin-protein (347 aa) initn: 742 init1: 532 opt: 751 Z-score: 669.3 bits: 133.4 E(85289): 1.5e-30 Smith-Waterman score: 751; 53.4% identity (71.6% similar) in 204 aa overlap (540-739:143-344) 510 520 530 540 550 560 pF1KE3 GGMSSLAGKKLKEGHETPMDIDSDDSKAASPPLKGSVSSEASELDKKEKGICVICMDTIS ::: . . : ..... : ::. :. NP_848 EHPEMHRAGPPPLRAAPLLPPGARGLPPPPPPLPPPLPPRLREEAEEQESTCPICLGEIQ 120 130 140 150 160 170 570 580 590 600 610 620 pF1KE3 NKKVLPKCKHEFCAPCINKAMSYKPICPTCQTSYGIQKGNQPE-GSMVFTVSRDS---LP : :.: ::.: :: ::..:.. : :: : :: ::::. : :. ::.:. :: NP_848 NAKTLEKCRHSFCEGCITRALQVKKACPMCGRFYGQLVGNQPQNGRML--VSKDATLLLP 180 190 200 210 220 230 630 640 650 660 670 680 pF1KE3 GYESFGTIVITYSMKAGIQTEEHPNPGKRYPGIQRTAYLPDNKEGRKVLKLLYRAFDQKL .::..::::: : . :.: :::::: :::: :.::::: :: ::: :. .::::.: NP_848 SYEKYGTIVIQYVFPPGVQGAEHPNPGVRYPGTTRVAYLPDCPEGNKVLTLFRKAFDQRL 240 250 260 270 280 290 690 700 710 720 730 740 pF1KE3 IFTVGYSRVLGVSDVITWNDIHHKTSRFGGPEMYGYPDPSYLKRVKEELKAKGIE ::.: : . : .:::::::::::: :::...:::::.:: ::.:::.:::: NP_848 TFTIGTSMTTGRPNVITWNDIHHKTSCTGGPQLFGYPDPTYLTRVQEELRAKGITDD 300 310 320 330 340 >>XP_011536324 (OMIM: 613142) PREDICTED: probable E3 ubi (347 aa) initn: 742 init1: 532 opt: 751 Z-score: 669.3 bits: 133.4 E(85289): 1.5e-30 Smith-Waterman score: 751; 53.4% identity (71.6% similar) in 204 aa overlap (540-739:143-344) 510 520 530 540 550 560 pF1KE3 GGMSSLAGKKLKEGHETPMDIDSDDSKAASPPLKGSVSSEASELDKKEKGICVICMDTIS ::: . . : ..... : ::. :. XP_011 EHPEMHRAGPPPLRAAPLLPPGARGLPPPPPPLPPPLPPRLREEAEEQESTCPICLGEIQ 120 130 140 150 160 170 570 580 590 600 610 620 pF1KE3 NKKVLPKCKHEFCAPCINKAMSYKPICPTCQTSYGIQKGNQPE-GSMVFTVSRDS---LP : :.: ::.: :: ::..:.. : :: : :: ::::. : :. ::.:. :: XP_011 NAKTLEKCRHSFCEGCITRALQVKKACPMCGRFYGQLVGNQPQNGRML--VSKDATLLLP 180 190 200 210 220 230 630 640 650 660 670 680 pF1KE3 GYESFGTIVITYSMKAGIQTEEHPNPGKRYPGIQRTAYLPDNKEGRKVLKLLYRAFDQKL .::..::::: : . :.: :::::: :::: :.::::: :: ::: :. .::::.: XP_011 SYEKYGTIVIQYVFPPGVQGAEHPNPGVRYPGTTRVAYLPDCPEGNKVLTLFRKAFDQRL 240 250 260 270 280 290 690 700 710 720 730 740 pF1KE3 IFTVGYSRVLGVSDVITWNDIHHKTSRFGGPEMYGYPDPSYLKRVKEELKAKGIE ::.: : . : .:::::::::::: :::...:::::.:: ::.:::.:::: XP_011 TFTIGTSMTTGRPNVITWNDIHHKTSCTGGPQLFGYPDPTYLTRVQEELRAKGITDD 300 310 320 330 340 >>XP_005268760 (OMIM: 613142) PREDICTED: probable E3 ubi (347 aa) initn: 742 init1: 532 opt: 751 Z-score: 669.3 bits: 133.4 E(85289): 1.5e-30 Smith-Waterman score: 751; 53.4% identity (71.6% similar) in 204 aa overlap (540-739:143-344) 510 520 530 540 550 560 pF1KE3 GGMSSLAGKKLKEGHETPMDIDSDDSKAASPPLKGSVSSEASELDKKEKGICVICMDTIS ::: . . : ..... : ::. :. XP_005 EHPEMHRAGPPPLRAAPLLPPGARGLPPPPPPLPPPLPPRLREEAEEQESTCPICLGEIQ 120 130 140 150 160 170 570 580 590 600 610 620 pF1KE3 NKKVLPKCKHEFCAPCINKAMSYKPICPTCQTSYGIQKGNQPE-GSMVFTVSRDS---LP : :.: ::.: :: ::..:.. : :: : :: ::::. : :. ::.:. :: XP_005 NAKTLEKCRHSFCEGCITRALQVKKACPMCGRFYGQLVGNQPQNGRML--VSKDATLLLP 180 190 200 210 220 230 630 640 650 660 670 680 pF1KE3 GYESFGTIVITYSMKAGIQTEEHPNPGKRYPGIQRTAYLPDNKEGRKVLKLLYRAFDQKL .::..::::: : . :.: :::::: :::: :.::::: :: ::: :. .::::.: XP_005 SYEKYGTIVIQYVFPPGVQGAEHPNPGVRYPGTTRVAYLPDCPEGNKVLTLFRKAFDQRL 240 250 260 270 280 290 690 700 710 720 730 740 pF1KE3 IFTVGYSRVLGVSDVITWNDIHHKTSRFGGPEMYGYPDPSYLKRVKEELKAKGIE ::.: : . : .:::::::::::: :::...:::::.:: ::.:::.:::: XP_005 TFTIGTSMTTGRPNVITWNDIHHKTSCTGGPQLFGYPDPTYLTRVQEELRAKGITDD 300 310 320 330 340 >>XP_005268755 (OMIM: 613142) PREDICTED: probable E3 ubi (350 aa) initn: 742 init1: 532 opt: 751 Z-score: 669.3 bits: 133.4 E(85289): 1.5e-30 Smith-Waterman score: 751; 53.4% identity (71.6% similar) in 204 aa overlap (540-739:146-347) 510 520 530 540 550 560 pF1KE3 GGMSSLAGKKLKEGHETPMDIDSDDSKAASPPLKGSVSSEASELDKKEKGICVICMDTIS ::: . . : ..... : ::. :. XP_005 EHPEMHRAGPPPLRAAPLLPPGARGLPPPPPPLPPPLPPRLREEAEEQESTCPICLGEIQ 120 130 140 150 160 170 570 580 590 600 610 620 pF1KE3 NKKVLPKCKHEFCAPCINKAMSYKPICPTCQTSYGIQKGNQPE-GSMVFTVSRDS---LP : :.: ::.: :: ::..:.. : :: : :: ::::. : :. ::.:. :: XP_005 NAKTLEKCRHSFCEGCITRALQVKKACPMCGRFYGQLVGNQPQNGRML--VSKDATLLLP 180 190 200 210 220 230 630 640 650 660 670 680 pF1KE3 GYESFGTIVITYSMKAGIQTEEHPNPGKRYPGIQRTAYLPDNKEGRKVLKLLYRAFDQKL .::..::::: : . :.: :::::: :::: :.::::: :: ::: :. .::::.: XP_005 SYEKYGTIVIQYVFPPGVQGAEHPNPGVRYPGTTRVAYLPDCPEGNKVLTLFRKAFDQRL 240 250 260 270 280 290 690 700 710 720 730 740 pF1KE3 IFTVGYSRVLGVSDVITWNDIHHKTSRFGGPEMYGYPDPSYLKRVKEELKAKGIE ::.: : . : .:::::::::::: :::...:::::.:: ::.:::.:::: XP_005 TFTIGTSMTTGRPNVITWNDIHHKTSCTGGPQLFGYPDPTYLTRVQEELRAKGITDD 300 310 320 330 340 350 >>XP_005268754 (OMIM: 613142) PREDICTED: probable E3 ubi (350 aa) initn: 742 init1: 532 opt: 751 Z-score: 669.3 bits: 133.4 E(85289): 1.5e-30 Smith-Waterman score: 751; 53.4% identity (71.6% similar) in 204 aa overlap (540-739:146-347) 510 520 530 540 550 560 pF1KE3 GGMSSLAGKKLKEGHETPMDIDSDDSKAASPPLKGSVSSEASELDKKEKGICVICMDTIS ::: . . : ..... : ::. :. XP_005 EHPEMHRAGPPPLRAAPLLPPGARGLPPPPPPLPPPLPPRLREEAEEQESTCPICLGEIQ 120 130 140 150 160 170 570 580 590 600 610 620 pF1KE3 NKKVLPKCKHEFCAPCINKAMSYKPICPTCQTSYGIQKGNQPE-GSMVFTVSRDS---LP : :.: ::.: :: ::..:.. : :: : :: ::::. : :. ::.:. :: XP_005 NAKTLEKCRHSFCEGCITRALQVKKACPMCGRFYGQLVGNQPQNGRML--VSKDATLLLP 180 190 200 210 220 230 630 640 650 660 670 680 pF1KE3 GYESFGTIVITYSMKAGIQTEEHPNPGKRYPGIQRTAYLPDNKEGRKVLKLLYRAFDQKL .::..::::: : . :.: :::::: :::: :.::::: :: ::: :. .::::.: XP_005 SYEKYGTIVIQYVFPPGVQGAEHPNPGVRYPGTTRVAYLPDCPEGNKVLTLFRKAFDQRL 240 250 260 270 280 290 690 700 710 720 730 740 pF1KE3 IFTVGYSRVLGVSDVITWNDIHHKTSRFGGPEMYGYPDPSYLKRVKEELKAKGIE ::.: : . : .:::::::::::: :::...:::::.:: ::.:::.:::: XP_005 TFTIGTSMTTGRPNVITWNDIHHKTSCTGGPQLFGYPDPTYLTRVQEELRAKGITDD 300 310 320 330 340 350 >>XP_005268757 (OMIM: 613142) PREDICTED: probable E3 ubi (350 aa) initn: 742 init1: 532 opt: 751 Z-score: 669.3 bits: 133.4 E(85289): 1.5e-30 Smith-Waterman score: 751; 53.4% identity (71.6% similar) in 204 aa overlap (540-739:146-347) 510 520 530 540 550 560 pF1KE3 GGMSSLAGKKLKEGHETPMDIDSDDSKAASPPLKGSVSSEASELDKKEKGICVICMDTIS ::: . . : ..... : ::. :. XP_005 EHPEMHRAGPPPLRAAPLLPPGARGLPPPPPPLPPPLPPRLREEAEEQESTCPICLGEIQ 120 130 140 150 160 170 570 580 590 600 610 620 pF1KE3 NKKVLPKCKHEFCAPCINKAMSYKPICPTCQTSYGIQKGNQPE-GSMVFTVSRDS---LP : :.: ::.: :: ::..:.. : :: : :: ::::. : :. ::.:. :: XP_005 NAKTLEKCRHSFCEGCITRALQVKKACPMCGRFYGQLVGNQPQNGRML--VSKDATLLLP 180 190 200 210 220 230 630 640 650 660 670 680 pF1KE3 GYESFGTIVITYSMKAGIQTEEHPNPGKRYPGIQRTAYLPDNKEGRKVLKLLYRAFDQKL .::..::::: : . :.: :::::: :::: :.::::: :: ::: :. .::::.: XP_005 SYEKYGTIVIQYVFPPGVQGAEHPNPGVRYPGTTRVAYLPDCPEGNKVLTLFRKAFDQRL 240 250 260 270 280 290 690 700 710 720 730 740 pF1KE3 IFTVGYSRVLGVSDVITWNDIHHKTSRFGGPEMYGYPDPSYLKRVKEELKAKGIE ::.: : . : .:::::::::::: :::...:::::.:: ::.:::.:::: XP_005 TFTIGTSMTTGRPNVITWNDIHHKTSCTGGPQLFGYPDPTYLTRVQEELRAKGITDD 300 310 320 330 340 350 >>NP_001273174 (OMIM: 613142) probable E3 ubiquitin-prot (350 aa) initn: 742 init1: 532 opt: 751 Z-score: 669.3 bits: 133.4 E(85289): 1.5e-30 Smith-Waterman score: 751; 53.4% identity (71.6% similar) in 204 aa overlap (540-739:146-347) 510 520 530 540 550 560 pF1KE3 GGMSSLAGKKLKEGHETPMDIDSDDSKAASPPLKGSVSSEASELDKKEKGICVICMDTIS ::: . . : ..... : ::. :. NP_001 EHPEMHRAGPPPLRAAPLLPPGARGLPPPPPPLPPPLPPRLREEAEEQESTCPICLGEIQ 120 130 140 150 160 170 570 580 590 600 610 620 pF1KE3 NKKVLPKCKHEFCAPCINKAMSYKPICPTCQTSYGIQKGNQPE-GSMVFTVSRDS---LP : :.: ::.: :: ::..:.. : :: : :: ::::. : :. ::.:. :: NP_001 NAKTLEKCRHSFCEGCITRALQVKKACPMCGRFYGQLVGNQPQNGRML--VSKDATLLLP 180 190 200 210 220 230 630 640 650 660 670 680 pF1KE3 GYESFGTIVITYSMKAGIQTEEHPNPGKRYPGIQRTAYLPDNKEGRKVLKLLYRAFDQKL .::..::::: : . :.: :::::: :::: :.::::: :: ::: :. .::::.: NP_001 SYEKYGTIVIQYVFPPGVQGAEHPNPGVRYPGTTRVAYLPDCPEGNKVLTLFRKAFDQRL 240 250 260 270 280 290 690 700 710 720 730 740 pF1KE3 IFTVGYSRVLGVSDVITWNDIHHKTSRFGGPEMYGYPDPSYLKRVKEELKAKGIE ::.: : . : .:::::::::::: :::...:::::.:: ::.:::.:::: NP_001 TFTIGTSMTTGRPNVITWNDIHHKTSCTGGPQLFGYPDPTYLTRVQEELRAKGITDD 300 310 320 330 340 350 >>XP_016867215 (OMIM: 613141) PREDICTED: probable E3 ubi (575 aa) initn: 560 init1: 274 opt: 521 Z-score: 465.8 bits: 96.5 E(85289): 3.3e-19 Smith-Waterman score: 528; 41.2% identity (60.6% similar) in 226 aa overlap (540-739:344-567) 510 520 530 540 550 560 pF1KE3 GGMSSLAGKKLKEGHETPMDIDSDDSKAASPPLKGSVSSEASELDKKEKGICVICMDTIS : . ... . :: :.:::. .: XP_016 PGSVPATVPMQMPKPSRVQQALAGATPKPEPEPEQVIKNYTEELKVPPDEDCIICMEKLS 320 330 340 350 360 370 570 580 590 600 pF1KE3 ----------NKKV-------LPKCKHEFCAPCI-------NKAMSYKPICPTCQTSYGI .: . : ::.: : :. :: : . ::.:.: :: XP_016 TASGYSDVTDSKAIGSLAVGHLTKCSHAFHLLCLLAMYCNGNKDGSLQ--CPSCKTIYGE 380 390 400 410 420 430 610 620 630 640 650 660 pF1KE3 QKGNQPEGSMVFTVSRDSLPGYESFGTIVITYSMKAGIQTEEHPNPGKRYP--GIQRTAY . :.::.:.: . ::::.:. :::.:.::. ::: ::::::: . :. : : XP_016 KTGTQPQGKMEVLRFQMSLPGHEDCGTILIVYSIPHGIQGPEHPNPGKPFTARGFPRQCY 440 450 460 470 480 490 670 680 690 700 710 720 pF1KE3 LPDNKEGRKVLKLLYRAFDQKLIFTVGYSRVLGVSDVITWNDIHHKTSRFGGPEMYGYPD :::: .:::::.:: :. ..:::::: : . : .:...::.::::: . .:::: XP_016 LPDNAQGRKVLELLKVAWKRRLIFTVGTSSTTGETDTVVWNEIHHKTEMDRNITGHGYPD 500 510 520 530 540 550 730 740 pF1KE3 PSYLKRVKEELKAKGIE :.::. : :: :.:. XP_016 PNYLQNVLAELAAQGVTEDCLEQQ 560 570 740 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 17:42:33 2016 done: Sun Nov 6 17:42:34 2016 Total Scan time: 9.470 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]