FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4428, 445 aa 1>>>pF1KE4428 445 - 445 aa - 445 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.6118+/-0.000838; mu= 15.9143+/- 0.050 mean_var=68.4497+/-13.342, 0's: 0 Z-trim(107.4): 14 B-trim: 0 in 0/50 Lambda= 0.155020 statistics sampled from 9568 (9574) to 9568 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.669), E-opt: 0.2 (0.294), width: 16 Scan time: 2.470 The best scores are: opt bits E(32554) CCDS3000.1 HGD gene_id:3081|Hs108|chr3 ( 445) 3129 708.8 2.8e-204 >>CCDS3000.1 HGD gene_id:3081|Hs108|chr3 (445 aa) initn: 3129 init1: 3129 opt: 3129 Z-score: 3780.9 bits: 708.8 E(32554): 2.8e-204 Smith-Waterman score: 3129; 99.8% identity (100.0% similar) in 445 aa overlap (1-445:1-445) 10 20 30 40 50 60 pF1KE4 MAELKYISGFGNECSSEDPRCPGSLPEGQNNPQVCPYNLYAEQLSGSAFTCPRSTNKRSW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 MAELKYISGFGNECSSEDPRCPGSLPEGQNNPQVCPYNLYAEQLSGSAFTCPRSTNKRSW 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE4 LYRILPSVSHKPFESIDEGHVTHNWDEVDPDPNQLRWKPFEIPKASQKKVDFVSGLHTLC :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: CCDS30 LYRILPSVSHKPFESIDEGQVTHNWDEVDPDPNQLRWKPFEIPKASQKKVDFVSGLHTLC 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE4 GAGDIKSNNGLAIHIFLCNTSMENRCFYNSDGDFLIVPQKGNLLIYTEFGKMLVQPNEIC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 GAGDIKSNNGLAIHIFLCNTSMENRCFYNSDGDFLIVPQKGNLLIYTEFGKMLVQPNEIC 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE4 VIQRGMRFSIDVFEETRGYILEVYGVHFELPDLGPIGANGLANPRDFLIPIAWYEDRQVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 VIQRGMRFSIDVFEETRGYILEVYGVHFELPDLGPIGANGLANPRDFLIPIAWYEDRQVP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE4 GGYTVINKYQGKLFAAKQDVSPFNVVAWHGNYTPYKYNLKNFMVINSVAFDHADPSIFTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 GGYTVINKYQGKLFAAKQDVSPFNVVAWHGNYTPYKYNLKNFMVINSVAFDHADPSIFTV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE4 LTAKSVRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 LTAKSVRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPG 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE4 GGSLHSTMTPHGPDADCFEKASKVKLAPERIADGTMAFMFESSLSLAVTKWGLKASRCLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 GGSLHSTMTPHGPDADCFEKASKVKLAPERIADGTMAFMFESSLSLAVTKWGLKASRCLD 370 380 390 400 410 420 430 440 pF1KE4 ENYHKCWEPLKSHFTPNSRNPAEPN ::::::::::::::::::::::::: CCDS30 ENYHKCWEPLKSHFTPNSRNPAEPN 430 440 445 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 00:40:22 2016 done: Sun Nov 6 00:40:22 2016 Total Scan time: 2.470 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]