FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE0811, 375 aa 1>>>pF1KE0811 375 - 375 aa - 375 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3675+/-0.000676; mu= 17.8284+/- 0.041 mean_var=148.4796+/-47.558, 0's: 0 Z-trim(112.8): 86 B-trim: 1593 in 2/47 Lambda= 0.105255 statistics sampled from 13309 (13524) to 13309 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.743), E-opt: 0.2 (0.415), width: 16 Scan time: 3.290 The best scores are: opt bits E(32554) CCDS2915.1 GPR27 gene_id:2850|Hs108|chr3 ( 375) 2555 399.6 2.3e-111 CCDS14349.1 GPR173 gene_id:54328|Hs108|chrX ( 373) 1379 221.1 1.3e-57 CCDS5758.1 GPR85 gene_id:54329|Hs108|chr7 ( 370) 1322 212.4 5.2e-55 >>CCDS2915.1 GPR27 gene_id:2850|Hs108|chr3 (375 aa) initn: 2555 init1: 2555 opt: 2555 Z-score: 2112.9 bits: 399.6 E(32554): 2.3e-111 Smith-Waterman score: 2555; 100.0% identity (100.0% similar) in 375 aa overlap (1-375:1-375) 10 20 30 40 50 60 pF1KE0 MANASEPGGSGGGEAAALGLKLATLSLLLCVSLAGNVLFALLIVRERSLHRAPYYLLLDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS29 MANASEPGGSGGGEAAALGLKLATLSLLLCVSLAGNVLFALLIVRERSLHRAPYYLLLDL 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE0 CLADGLRALACLPAVMLAARRAAAAAGAPPGALGCKLLAFLAALFCFHAAFLLLGVGVTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS29 CLADGLRALACLPAVMLAARRAAAAAGAPPGALGCKLLAFLAALFCFHAAFLLLGVGVTR 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE0 YLAIAHHRFYAERLAGWPCAAMLVCAAWALALAAAFPPVLDGGGDDEDAPCALEQRPDGA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS29 YLAIAHHRFYAERLAGWPCAAMLVCAAWALALAAAFPPVLDGGGDDEDAPCALEQRPDGA 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE0 PGALGFLLLLAVVVGATHLVYLRLLFFIHDRRKMRPARLVPAVSHDWTFHGPGATGQAAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS29 PGALGFLLLLAVVVGATHLVYLRLLFFIHDRRKMRPARLVPAVSHDWTFHGPGATGQAAA 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE0 NWTAGFGRGPTPPALVGIRPAGPGRGARRLLVLEEFKTEKRLCKMFYAVTLLFLLLWGPY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS29 NWTAGFGRGPTPPALVGIRPAGPGRGARRLLVLEEFKTEKRLCKMFYAVTLLFLLLWGPY 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE0 VVASYLRVLVRPGAVPQAYLTASVWLTFAQAGINPVVCFLFNRELRDCFRAQFPCCQSPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS29 VVASYLRVLVRPGAVPQAYLTASVWLTFAQAGINPVVCFLFNRELRDCFRAQFPCCQSPR 310 320 330 340 350 360 370 pF1KE0 TTQATHPCDLKGIGL ::::::::::::::: CCDS29 TTQATHPCDLKGIGL 370 >>CCDS14349.1 GPR173 gene_id:54328|Hs108|chrX (373 aa) initn: 970 init1: 398 opt: 1379 Z-score: 1147.8 bits: 221.1 E(32554): 1.3e-57 Smith-Waterman score: 1379; 54.7% identity (83.4% similar) in 362 aa overlap (1-355:1-357) 10 20 30 40 50 pF1KE0 MANAS-EP---GGSGGGEAAALGLKLATLSLLLCVSLAGNVLFALLIVRERSLHRAPYYL :::.. :: .:. . .:. .::. :.:..:::::::....::...::.::.::::. CCDS14 MANTTGEPEEVSGALSPPSASAYVKLVLLGLIMCVSLAGNAILSLLVLKERALHKAPYYF 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE0 LLDLCLADGLRALACLPAVMLAARRAAAAAGAPPGALGCKLLAFLAALFCFHAAFLLLGV :::::::::.:. .:.: :. ..:.... . . ::.::..::.:.::::::::.:. . CCDS14 LLDLCLADGIRSAVCFPFVLASVRHGSSWTFS---ALSCKIVAFMAVLFCFHAAFMLFCI 70 80 90 100 110 120 130 140 150 160 170 pF1KE0 GVTRYLAIAHHRFYAERLAGWPCAAMLVCAAWALALAAAFPPVLDGGGDD---EDAPCAL .::::.:::::::::.:.. : :::. .: ::.:..: :::::.: : :. : . CCDS14 SVTRYMAIAHHRFYAKRMTLWTCAAV-ICMAWTLSVAMAFPPVFDVGTYKFIREEDQCIF 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE0 EQRPDGAPGALGFLLLLAVVVGATHLVYLRLLFFIHDRRKMRPARLVPAVSHDWTFHGPG :.: : .:::.:.:::...::: :: .::.: . .:::.:...:::.:..::::::: CCDS14 EHRYFKANDTLGFMLMLAVLMAATHAVYGKLLLFEYRHRKMKPVQMVPAISQNWTFHGPG 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE0 ATGQAAANWTAGFGRGPTPPALVGIRPAGPGRGARRLLVLEEFKTEKRLCKMFYAVTLLF ::::::::: ::::::: ::.:.::: : . ..:::: ..: : ::.: .::::.:::: CCDS14 ATGQAAANWIAGFGRGPMPPTLLGIRQNGHA-ASRRLLGMDEVKGEKQLGRMFYAITLLF 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE0 LLLWGPYVVASYLRVLVRPGAVPQAYLTASVWLTFAQAGINPVVCFLFNRELRDCFRAQF ::::.::.:: : ::.:. :::. ::...::..::::..::.::::.:..:. :.:.. CCDS14 LLLWSPYIVACYWRVFVKACAVPHRYLATAVWMSFAQAAVNPIVCFLLNKDLKKCLRTHA 300 310 320 330 340 350 360 370 pF1KE0 PCCQSPRTTQATHPCDLKGIGL :: CCDS14 PCWGTGGAPAPREPYCVM 360 370 >>CCDS5758.1 GPR85 gene_id:54329|Hs108|chr7 (370 aa) initn: 1263 init1: 802 opt: 1322 Z-score: 1101.1 bits: 212.4 E(32554): 5.2e-55 Smith-Waterman score: 1322; 55.2% identity (82.3% similar) in 344 aa overlap (20-360:22-361) 10 20 30 40 50 pF1KE0 MANASEPGGSGGGEAAALGLKLATLSLLLCVSLAGNVLFALLIVRERSLHRAPYYLLL :::..:.... ::..::.:...:.:....:::::::.:: CCDS57 MANYSHAADNILQNLSPLTAFLKLTSLGFIIGVSVVGNLLISILLVKDKTLHRAPYYFLL 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE0 DLCLADGLRALACLPAVMLAARRAAAAAGAPPGALGCKLLAFLAALFCFHAAFLLLGVGV ::: .: ::. :.: :. ... ... . :.: ::..:::..: :::.::.:. ..: CCDS57 DLCCSDILRSAICFPFVFNSVKNGSTWTY---GTLTCKVIAFLGVLSCFHTAFMLFCISV 70 80 90 100 110 120 130 140 150 160 170 pF1KE0 TRYLAIAHHRFYAERLAGWPCAAMLVCAAWALALAAAFPPVLDGGGDD---EDAPCALEQ ::::::::::::..::. : : :. .: .:.:..: ::::::: : . :. :.... CCDS57 TRYLAIAHHRFYTKRLTFWTCLAV-ICMVWTLSVAMAFPPVLDVGTYSFIREEDQCTFQH 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE0 RPDGAPGALGFLLLLAVVVGATHLVYLRLLFFIHDRRKMRPARLVPAVSHDWTFHGPGAT : : .:::.::::... ::.::::.:.::.::::::.:...: :::..::::::::. CCDS57 RSFRANDSLGFMLLLALILLATQLVYLKLIFFVHDRRKMKPVQFVAAVSQNWTFHGPGAS 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE0 GQAAANWTAGFGRGPTPPALVGIRPAGPGRGARRLLVLEEFKTEKRLCKMFYAVTLLFLL ::::::: ::::::::::.:.::: . : ::::::.::: :::. .::: .:.::: CCDS57 GQAAANWLAGFGRGPTPPTLLGIRQNANTTGRRRLLVLDEFKMEKRISRMFYIMTFLFLT 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE0 LWGPYVVASYLRVLVRPGAVPQAYLTASVWLTFAQAGINPVVCFLFNRELRDCFRAQFPC :::::.:: : ::..: .:: ..:::.::..:::::::: ::.. ::::: :: . . CCDS57 LWGPYLVACYWRVFARGPVVPGGFLTAAVWMSFAQAGINPFVCIFSNRELRRCFSTTLLY 300 310 320 330 340 350 360 370 pF1KE0 CQSPRTTQATHPCDLKGIGL :.. : CCDS57 CRKSRLPREPYCVI 360 370 375 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 17:45:12 2016 done: Sun Nov 6 17:45:12 2016 Total Scan time: 3.290 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]