FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5248, 204 aa 1>>>pF1KE5248 204 - 204 aa - 204 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.6330+/-0.000977; mu= 8.7396+/- 0.059 mean_var=123.5380+/-24.599, 0's: 0 Z-trim(108.7): 17 B-trim: 62 in 1/50 Lambda= 0.115392 statistics sampled from 10358 (10363) to 10358 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.679), E-opt: 0.2 (0.318), width: 16 Scan time: 2.150 The best scores are: opt bits E(32554) CCDS2900.1 THOC7 gene_id:80145|Hs108|chr3 ( 204) 1326 231.2 3.3e-61 CCDS74957.1 THOC7 gene_id:80145|Hs108|chr3 ( 152) 975 172.7 1e-43 >>CCDS2900.1 THOC7 gene_id:80145|Hs108|chr3 (204 aa) initn: 1326 init1: 1326 opt: 1326 Z-score: 1212.3 bits: 231.2 E(32554): 3.3e-61 Smith-Waterman score: 1326; 100.0% identity (100.0% similar) in 204 aa overlap (1-204:1-204) 10 20 30 40 50 60 pF1KE5 MGAVTDDEVIRKRLLIDGDGAGDDRRINLLVKSFIKWCNSGSQEEGYSQYQRMLSTLSQC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS29 MGAVTDDEVIRKRLLIDGDGAGDDRRINLLVKSFIKWCNSGSQEEGYSQYQRMLSTLSQC 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 EFSMGKTLLVYDMNLREMENYEKIYKEIECSIAGAHEKIAECKKQILQAKRIRKNRQEYD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS29 EFSMGKTLLVYDMNLREMENYEKIYKEIECSIAGAHEKIAECKKQILQAKRIRKNRQEYD 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 ALAKVIQHHPDRHETLKELEALGKELEHLSHIKESVEDKLELRRKQFHVLLSTIHELQQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS29 ALAKVIQHHPDRHETLKELEALGKELEHLSHIKESVEDKLELRRKQFHVLLSTIHELQQT 130 140 150 160 170 180 190 200 pF1KE5 LENDEKLSEVEEAQEASMETDPKP :::::::::::::::::::::::: CCDS29 LENDEKLSEVEEAQEASMETDPKP 190 200 >>CCDS74957.1 THOC7 gene_id:80145|Hs108|chr3 (152 aa) initn: 975 init1: 975 opt: 975 Z-score: 898.3 bits: 172.7 E(32554): 1e-43 Smith-Waterman score: 975; 100.0% identity (100.0% similar) in 152 aa overlap (53-204:1-152) 30 40 50 60 70 80 pF1KE5 DDRRINLLVKSFIKWCNSGSQEEGYSQYQRMLSTLSQCEFSMGKTLLVYDMNLREMENYE :::::::::::::::::::::::::::::: CCDS74 MLSTLSQCEFSMGKTLLVYDMNLREMENYE 10 20 30 90 100 110 120 130 140 pF1KE5 KIYKEIECSIAGAHEKIAECKKQILQAKRIRKNRQEYDALAKVIQHHPDRHETLKELEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 KIYKEIECSIAGAHEKIAECKKQILQAKRIRKNRQEYDALAKVIQHHPDRHETLKELEAL 40 50 60 70 80 90 150 160 170 180 190 200 pF1KE5 GKELEHLSHIKESVEDKLELRRKQFHVLLSTIHELQQTLENDEKLSEVEEAQEASMETDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS74 GKELEHLSHIKESVEDKLELRRKQFHVLLSTIHELQQTLENDEKLSEVEEAQEASMETDP 100 110 120 130 140 150 pF1KE5 KP :: CCDS74 KP 204 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:51:50 2016 done: Mon Nov 7 22:51:50 2016 Total Scan time: 2.150 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]