FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3983, 237 aa 1>>>pF1KE3983 237 - 237 aa - 237 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.1291+/-0.000957; mu= 9.3337+/- 0.057 mean_var=64.9356+/-13.377, 0's: 0 Z-trim(104.8): 54 B-trim: 332 in 1/49 Lambda= 0.159160 statistics sampled from 8056 (8111) to 8056 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.634), E-opt: 0.2 (0.249), width: 16 Scan time: 1.840 The best scores are: opt bits E(32554) CCDS2891.1 KCTD6 gene_id:200845|Hs108|chr3 ( 237) 1621 381.0 3.7e-106 CCDS31645.1 KCTD21 gene_id:283219|Hs108|chr11 ( 260) 485 120.1 1.4e-27 CCDS12434.1 KCTD15 gene_id:79047|Hs108|chr19 ( 234) 367 93.0 1.8e-19 CCDS46039.1 KCTD15 gene_id:79047|Hs108|chr19 ( 283) 367 93.1 2.1e-19 CCDS11888.1 KCTD1 gene_id:284252|Hs108|chr18 ( 257) 359 91.2 6.9e-19 CCDS9396.1 KCTD4 gene_id:386618|Hs108|chr13 ( 259) 322 82.7 2.5e-16 CCDS41889.1 KCNRG gene_id:283518|Hs108|chr13 ( 229) 291 75.6 3.1e-14 CCDS9424.1 KCNRG gene_id:283518|Hs108|chr13 ( 272) 291 75.6 3.7e-14 CCDS9455.1 KCTD12 gene_id:115207|Hs108|chr13 ( 325) 283 73.8 1.6e-13 CCDS60908.1 KCTD14 gene_id:65987|Hs108|chr11 ( 225) 264 69.4 2.2e-12 CCDS8255.2 KCTD14 gene_id:65987|Hs108|chr11 ( 255) 264 69.4 2.5e-12 CCDS34260.1 KCTD16 gene_id:57528|Hs108|chr5 ( 428) 266 69.9 3e-12 CCDS55117.1 KCTD7 gene_id:154881|Hs108|chr7 ( 288) 260 68.5 5.4e-12 CCDS5534.1 KCTD7 gene_id:154881|Hs108|chr7 ( 289) 260 68.5 5.4e-12 CCDS2330.1 KCTD18 gene_id:130535|Hs108|chr2 ( 426) 258 68.0 1.1e-11 CCDS32545.1 KCTD11 gene_id:147040|Hs108|chr17 ( 232) 244 64.8 5.6e-11 CCDS11227.1 TNFAIP1 gene_id:7126|Hs108|chr17 ( 316) 245 65.0 6.4e-11 >>CCDS2891.1 KCTD6 gene_id:200845|Hs108|chr3 (237 aa) initn: 1621 init1: 1621 opt: 1621 Z-score: 2019.3 bits: 381.0 E(32554): 3.7e-106 Smith-Waterman score: 1621; 100.0% identity (100.0% similar) in 237 aa overlap (1-237:1-237) 10 20 30 40 50 60 pF1KE3 MDNGDWGYMMTDPVTLNVGGHLYTTSLTTLTRYPDSMLGAMFGGDFPTARDPQGNYFIDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS28 MDNGDWGYMMTDPVTLNVGGHLYTTSLTTLTRYPDSMLGAMFGGDFPTARDPQGNYFIDR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 DGPLFRYVLNFLRTSELTLPLDFKEFDLLRKEADFYQIEPLIQCLNDPKPLYPMDTFEEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS28 DGPLFRYVLNFLRTSELTLPLDFKEFDLLRKEADFYQIEPLIQCLNDPKPLYPMDTFEEV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 VELSSTRKLSKYSNPVAVIITQLTITTKVHSLLEGISNYFTKWNKHMMDTRDCQVSFTFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS28 VELSSTRKLSKYSNPVAVIITQLTITTKVHSLLEGISNYFTKWNKHMMDTRDCQVSFTFG 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 PCDYHQEVSLRVHLMEYITKQGFTIRNTRVHHMSERANENTVEHNWTFCRLARKTDD ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS28 PCDYHQEVSLRVHLMEYITKQGFTIRNTRVHHMSERANENTVEHNWTFCRLARKTDD 190 200 210 220 230 >>CCDS31645.1 KCTD21 gene_id:283219|Hs108|chr11 (260 aa) initn: 476 init1: 476 opt: 485 Z-score: 608.8 bits: 120.1 E(32554): 1.4e-27 Smith-Waterman score: 485; 71.4% identity (89.8% similar) in 98 aa overlap (10-107:1-98) 10 20 30 40 50 60 pF1KE3 MDNGDWGYMMTDPVTLNVGGHLYTTSLTTLTRYPDSMLGAMFGGDFPTARDPQGNYFIDR :.::.::::::.::::::.::: .:::::::::.: .:: :: ::: :::: CCDS31 MSDPITLNVGGKLYTTSLATLTSFPDSMLGAMFSGKMPTKRDSQGNCFIDR 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 DGPLFRYVLNFLRTSELTLPLDFKEFDLLRKEADFYQIEPLIQCLNDPKPLYPMDTFEEV :: .:::.:::::::.: :: ::.:. :::.::::::..:::. :.. CCDS31 DGKVFRYILNFLRTSHLDLPEDFQEMGLLRREADFYQVQPLIEALQEKEVELSKAEKNAM 60 70 80 90 100 110 130 140 150 160 170 180 pF1KE3 VELSSTRKLSKYSNPVAVIITQLTITTKVHSLLEGISNYFTKWNKHMMDTRDCQVSFTFG CCDS31 LNITLNQRVQTVHFTVREAPQIYSLSSSSMEVFNANIFSTSCLFLKLLGSKLFYCSNGNL 120 130 140 150 160 170 >>CCDS12434.1 KCTD15 gene_id:79047|Hs108|chr19 (234 aa) initn: 382 init1: 227 opt: 367 Z-score: 463.2 bits: 93.0 E(32554): 1.8e-19 Smith-Waterman score: 367; 56.4% identity (83.0% similar) in 94 aa overlap (13-105:57-150) 10 20 30 40 pF1KE3 MDNGDWGYMMTDPVTLNVGGHLYTTSLTTLTRYPDSMLGAMF :: ..::::.::.::.:::.:::: .. .: CCDS12 MSRLSLTRSPVSPLAAQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPDSRISRLF 30 40 50 60 70 80 50 60 70 80 90 100 pF1KE3 GGDFPTARDP-QGNYFIDRDGPLFRYVLNFLRTSELTLPLDFKEFDLLRKEADFYQIEPL .: : . : . .::::::: .:::::.:::::.: :: :::.:.:: .:: .::..:. CCDS12 NGTEPIVLDSLKQHYFIDRDGEIFRYVLSFLRTSKLLLPDDFKDFSLLYEEARYYQLQPM 90 100 110 120 130 140 110 120 130 140 150 160 pF1KE3 IQCLNDPKPLYPMDTFEEVVELSSTRKLSKYSNPVAVIITQLTITTKVHSLLEGISNYFT .. : CCDS12 VRELERWQQEQEQRRRSRACDCLVVRVTPDLGERIALSGEKALIEEVFPETGDVMCNSVN 150 160 170 180 190 200 >>CCDS46039.1 KCTD15 gene_id:79047|Hs108|chr19 (283 aa) initn: 382 init1: 227 opt: 367 Z-score: 461.7 bits: 93.1 E(32554): 2.1e-19 Smith-Waterman score: 367; 56.4% identity (83.0% similar) in 94 aa overlap (13-105:57-150) 10 20 30 40 pF1KE3 MDNGDWGYMMTDPVTLNVGGHLYTTSLTTLTRYPDSMLGAMF :: ..::::.::.::.:::.:::: .. .: CCDS46 MSRLSLTRSPVSPLAAQGIPLPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPDSRISRLF 30 40 50 60 70 80 50 60 70 80 90 100 pF1KE3 GGDFPTARDP-QGNYFIDRDGPLFRYVLNFLRTSELTLPLDFKEFDLLRKEADFYQIEPL .: : . : . .::::::: .:::::.:::::.: :: :::.:.:: .:: .::..:. CCDS46 NGTEPIVLDSLKQHYFIDRDGEIFRYVLSFLRTSKLLLPDDFKDFSLLYEEARYYQLQPM 90 100 110 120 130 140 110 120 130 140 150 160 pF1KE3 IQCLNDPKPLYPMDTFEEVVELSSTRKLSKYSNPVAVIITQLTITTKVHSLLEGISNYFT .. : CCDS46 VRELERWQQEQEQRRRSRACDCLVVRVTPDLGERIALSGEKALIEEVFPETGDVMCNSVN 150 160 170 180 190 200 >>CCDS11888.1 KCTD1 gene_id:284252|Hs108|chr18 (257 aa) initn: 356 init1: 217 opt: 359 Z-score: 452.6 bits: 91.2 E(32554): 6.9e-19 Smith-Waterman score: 359; 33.7% identity (59.7% similar) in 196 aa overlap (13-205:31-217) 10 20 30 40 pF1KE3 MDNGDWGYMMTDPVTLNVGGHLYTTSLTTLTRYPDSMLGAMF :: ..::::.::.::.:::.::.: .: .: CCDS11 MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSSLATLTKYPESRIGRLF 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE3 GGDFPTARDP-QGNYFIDRDGPLFRYVLNFLRTSELTLPLDFKEFDLLRKEADFYQIEPL : : . : . .::::::: .:::.:::::::.: .: :::.. :: .:: ..:..:. CCDS11 DGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDFKDYTLLYEEAKYFQLQPM 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE3 IQCLNDPKPLYPMDTFEEVVELSSTRKLSKYSNPVAVIITQLTITTKVHSLLEGISNYFT . .. : : . : .: .. ... . : . . . : . CCDS11 LLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGDKSLIEEVFPEIGDVMCNSVN 130 140 150 160 170 180 170 180 190 200 210 pF1KE3 K-WNKHMMDTRDCQVSFTF-GPCDYHQEVSLRVHLMEYITKQGFTIRNTRVHHMSERANE ::. :. . : . : : .. :...: . ..:: : CCDS11 AGWNH---DSTHV-IRFPLNGYCHLNS-----VQVLERLQQRGFEIVGSCGGGVDSSQFS 190 200 210 220 230 220 230 pF1KE3 NTVEHNWTFCRLARKTDD CCDS11 EYVLRRELRRTPRVPSVIRIKQEPLD 240 250 >>CCDS9396.1 KCTD4 gene_id:386618|Hs108|chr13 (259 aa) initn: 306 init1: 306 opt: 322 Z-score: 406.6 bits: 82.7 E(32554): 2.5e-16 Smith-Waterman score: 322; 39.7% identity (70.5% similar) in 156 aa overlap (14-161:35-188) 10 20 30 40 pF1KE3 MDNGDWGYMMTDPVTLNVGGHLYTTSLTTLTRYPDSMLGAMFG .::::::.:: :. :::.:::..: .. . CCDS93 INRREKEKEYEGKHNSLEDTDQGKNCKSTLMTLNVGGYLYITQKQTLTKYPDTFLEGIVN 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE3 GDFPTARDPQGNYFIDRDGPLFRYVLNFLRTSELTLPLDFKEFDLLRKEADFYQIEPLIQ : . : .:.::::::: :::.::::::..:: :: :.: .:: .::.:.:.. : . CCDS93 GKILCPFDADGHYFIDRDGLLFRHVLNFLRNGELLLPEGFRENQLLAQEAEFFQLKGLAE 70 80 90 100 110 120 110 120 130 140 150 pF1KE3 CLN---DPKPLYPMDT-FEEVVE-LSSTRKLSKYSN-P--VAVIITQLTITTKVHSLLEG .. . . : : .: : :... . .. : . : : .. : .......: : :.: CCDS93 EVKSRWEKEQLTPRETTFLEITDNHDRSQGLRIFCNAPDFISKIKSRIVLVSK--SRLDG 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE3 ISNYFTKWNKHMMDTRDCQVSFTFGPCDYHQEVSLRVHLMEYITKQGFTIRNTRVHHMSE . . :. CCDS93 FPEEFSISSNIIQFKYFIKSENGTRLVLKEDNTFVCTLETLKFEAIMMALKCGFRLLTSL 190 200 210 220 230 240 >>CCDS41889.1 KCNRG gene_id:283518|Hs108|chr13 (229 aa) initn: 266 init1: 266 opt: 291 Z-score: 369.0 bits: 75.6 E(32554): 3.1e-14 Smith-Waterman score: 291; 35.5% identity (64.5% similar) in 152 aa overlap (14-160:7-157) 10 20 30 40 50 60 pF1KE3 MDNGDWGYMMTDPVTLNVGGHLYTTSLTTLTRYPDSMLGAMFGGDFPTARDPQGNYFIDR :::::::...:: ..:. ..: : :. :. : . :. :.:: CCDS41 MSSQELVTLNVGGKIFTTRFSTIKQFPASRLARMLDGRDQEFKMVGGQIFVDR 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 DGPLFRYVLNFLRTSELTLPLDFKEFDLLRKEADFYQIEPLIQCLNDPKPLYPMDTFEEV :: :: ..:.:::: .: :: .:... :..:: ::... :.. :: : : : .. :: CCDS41 DGDLFSFILDFLRTHQLLLPTEFSDYLRLQREALFYELRSLVDLLN-PYLLQPRPALVEV 60 70 80 90 100 110 130 140 150 160 170 pF1KE3 VELSST-----RKLSKYSNPVAVIITQLTITTKVHSLLEGISNYFTKWNKHMMDTRDCQV :: . : ... :. . .. ..:. :. : .:.: CCDS41 HFLSRNTQAFFRVFGSCSKTIEMLTGRITVFTEQPSAPTWNGNFFPPQMTLLPLPPQRPS 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 SFTFGPCDYHQEVSLRVHLMEYITKQGFTIRNTRVHHMSERANENTVEHNWTFCRLARKT CCDS41 YHDLVFQCGSDSTTDNQTGVRLVCNGVISAHHNLRLWGSSDSPASASRVAGITGMFL 180 190 200 210 220 >>CCDS9424.1 KCNRG gene_id:283518|Hs108|chr13 (272 aa) initn: 294 init1: 266 opt: 291 Z-score: 367.7 bits: 75.6 E(32554): 3.7e-14 Smith-Waterman score: 291; 35.5% identity (64.5% similar) in 152 aa overlap (14-160:7-157) 10 20 30 40 50 60 pF1KE3 MDNGDWGYMMTDPVTLNVGGHLYTTSLTTLTRYPDSMLGAMFGGDFPTARDPQGNYFIDR :::::::...:: ..:. ..: : :. :. : . :. :.:: CCDS94 MSSQELVTLNVGGKIFTTRFSTIKQFPASRLARMLDGRDQEFKMVGGQIFVDR 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 DGPLFRYVLNFLRTSELTLPLDFKEFDLLRKEADFYQIEPLIQCLNDPKPLYPMDTFEEV :: :: ..:.:::: .: :: .:... :..:: ::... :.. :: : : : .. :: CCDS94 DGDLFSFILDFLRTHQLLLPTEFSDYLRLQREALFYELRSLVDLLN-PYLLQPRPALVEV 60 70 80 90 100 110 130 140 150 160 170 pF1KE3 VELSST-----RKLSKYSNPVAVIITQLTITTKVHSLLEGISNYFTKWNKHMMDTRDCQV :: . : ... :. . .. ..:. :. : .:.: CCDS94 HFLSRNTQAFFRVFGSCSKTIEMLTGRITVFTEQPSAPTWNGNFFPPQMTLLPLPPQRPS 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE3 SFTFGPCDYHQEVSLRVHLMEYITKQGFTIRNTRVHHMSERANENTVEHNWTFCRLARKT CCDS94 YHDLVFQCGSDSTTDNQTGVRYVSIKPDNRKLANGTNVLGLLIDTLLKEGFHLVSTRTVS 180 190 200 210 220 230 >>CCDS9455.1 KCTD12 gene_id:115207|Hs108|chr13 (325 aa) initn: 280 init1: 195 opt: 283 Z-score: 356.5 bits: 73.8 E(32554): 1.6e-13 Smith-Waterman score: 283; 42.1% identity (69.2% similar) in 107 aa overlap (9-113:31-137) 10 20 30 pF1KE3 MDNGDWGYMMTDPVTLNVGGHLYTTSLTTLTRYPDSML .. : : :::::..:.: :.. :::.: CCDS94 MALADSTRGLPNGGGGGGGSGSSSSSAEPPLFPDIVELNVGGQVYVTRRCTVVSVPDSLL 10 20 30 40 50 60 40 50 60 70 80 90 pF1KE3 GAMFGGDFPT--ARDPQGNYFIDRDGPLFRYVLNFLRTSELTLPLDFKEFDLLRKEADFY :: . : ::: .: .:.:::: ::::.:..:: .:.:: : : . :..::... CCDS94 WRMFTQQQPQELARDSKGRFFLDRDGFLFRYILDYLRDLQLVLPDYFPERSRLQREAEYF 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE3 QIEPLIQCLNDPKPLYPMDTFEEVVELSSTRKLSKYSNPVAVIITQLTITTKVHSLLEGI .. :.. :. :. : CCDS94 ELPELVRRLGAPQQPGPGPPPSRRGVHKEGSLGDELLPLGYSEPEQQEGASAGAPSPTLE 130 140 150 160 170 180 >>CCDS60908.1 KCTD14 gene_id:65987|Hs108|chr11 (225 aa) initn: 244 init1: 191 opt: 264 Z-score: 335.7 bits: 69.4 E(32554): 2.2e-12 Smith-Waterman score: 264; 29.1% identity (59.2% similar) in 206 aa overlap (10-205:1-198) 10 20 30 40 50 60 pF1KE3 MDNGDWGYMMTDPVTLNVGGHLYTTSLTTLTRYPDSMLGAMFGGDFPTARDPQGNYFIDR :. : :::::...::.: :: ..: : :. ::.. .. : .: .:::: CCDS60 MSTVVELNVGGEFHTTTLGTLRKFPGSKLAEMFSSLAKASTDAEGRFFIDR 10 20 30 40 50 70 80 90 100 110 120 pF1KE3 DGPLFRYVLNFLRTSELTLPLDFKEFDLLRKEADFYQIEPLIQCLNDPKPLYPMDTFEEV . :: .:..:::.. .: ... . .::.::.:.::.. :.: .:. :.: CCDS60 PSTYFRPILDYLRTGQ--VPT--QHIPEVYREAQFYEIKPLVKLLED----MPQIFGEQV 60 70 80 90 100 130 140 150 160 170 pF1KE3 VELSSTRKLSKYSNPVAVIITQL---TITTKVHSLL------EGISNYFTKWNKHMMDTR . . .. ::. . ... .::.. :.: : . :... ..: . CCDS60 SRKQFLLQVPGYSENLELMVRLARAEAITARKSSVLVCLVETEEQDAYYSEVLCFLQDKK 110 120 130 140 150 160 180 190 200 210 220 230 pF1KE3 DCQVSFTFGPCDYHQEVSLRVHLMEY-ITKQGFTIRNTRVHHMSERANENTVEHNWTFCR . ::: . : .: .:. : ::. . CCDS60 MFKSVVKFGPWKAVLDNSDLMHCLEMDIKAQGYKVFSKFYLTYPTKRNEFHFNIYSFTFT 170 180 190 200 210 220 pF1KE3 LARKTDD CCDS60 WW 237 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 08:21:53 2016 done: Sun Nov 6 08:21:53 2016 Total Scan time: 1.840 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]