(Circular) (Six-base) MAPSORT of: pFN21AE2792.seq Check: 7509 from: 1 to: 5335 pFN21AE2792 5335 bp With 182 enzymes: SgfI * February 20, 2021 22:13 .. AatII G_ACGT'C Cuts at: 278 331 414 600 1536 3145 278 Size: 53 83 186 936 1609 2468 Fragments arranged by size: 2468 1609 936 186 83 53 AccI GT'mk_AC Cuts at: 1937 2678 1937 Size: 741 4594 Acc65I G'GTAC_C Cuts at: 2656 2656 Size: 5335 AclI AA'CG_TT Cuts at: 1563 3462 3835 1563 Size: 1899 373 3063 Fragments arranged by size: 3063 1899 373 AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 1632 2540 3398 4782 5050 1632 Size: 908 858 1384 268 1917 Fragments arranged by size: 1917 1384 908 858 268 AflII C'TTAA_G Cuts at: 820 1017 820 Size: 197 5138 AflIII A'CryG_T Cuts at: 1203 4234 5211 1203 Size: 3031 977 1327 Fragments arranged by size: 3031 1327 977 AgeI A'CCGG_T Cuts at: 4166 4166 Size: 5335 AhdI GACnn_n'nnGTC Cuts at: 4064 4064 Size: 5335 AleI CACnn'nnGTG Cuts at: 1166 1166 Size: 5335 AlfI GCAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1184 1184 Size: 5335 AlwNI CAG_nnn'CTG Cuts at: 2155 2246 3078 4650 2155 Size: 91 832 1572 2840 Fragments arranged by size: 2840 1572 832 91 ApaI G_GGCC'C Cuts at: 2315 2315 Size: 5335 ApaLI G'TGCA_C Cuts at: 3392 4548 3392 Size: 1156 4179 ApoI r'AATT_y Cuts at: 1493 2644 2870 3022 5131 1493 Size: 1151 226 152 2109 1697 Fragments arranged by size: 2109 1697 1151 226 152 AseI AT'TA_AT Cuts at: 160 1032 3889 160 Size: 872 2857 1606 Fragments arranged by size: 2857 1606 872 AsiSI GCG_AT'CGC Cuts at: 2001 2001 Size: 5335 AvaI C'yCGr_G Cuts at: 1870 1943 2389 2660 1870 Size: 73 446 271 4545 Fragments arranged by size: 4545 446 271 73 BamHI G'GATC_C Cuts at: 2665 3032 2665 Size: 367 4968 BanI G'GyrC_C Cuts at: 618 943 1160 1787 2033 2565 2656 4111 618 Size: 325 217 627 246 532 91 1455 1842 Fragments arranged by size: 1842 1455 627 532 325 246 217 91 BanII G_rGCy'C Cuts at: 1391 2315 2631 2654 1391 Size: 924 316 23 4072 Fragments arranged by size: 4072 924 316 23 BbsI GAAGACnn'nnnn_ Cuts at: 928 1899 2462 928 Size: 971 563 3801 Fragments arranged by size: 3801 971 563 BcgI CGAnnnnnnTGCnnnnnnnnnn_nn' Cuts at: 1903 1937 2108 2142 3526 3560 1903 Size: 34 171 34 1384 34 3678 Fragments arranged by size: 3678 1384 171 34 34 34 BciVI GTATCCnnnnn_n' Cuts at: 3227 4437 3227 Size: 1210 4125 BclI T'GATC_A Cuts at: 1548 2325 2547 1548 Size: 777 222 4336 Fragments arranged by size: 4336 777 222 BglI GCCn_nnn'nGGC Cuts at: 136 243 365 436 1067 1672 3946 136 Size: 107 122 71 631 605 2274 1525 Fragments arranged by size: 2274 1525 631 605 122 107 71 BglII A'GATC_T Cuts at: 5330 5330 Size: 5335 BlpI GC'TnA_GC Cuts at: 2752 2752 Size: 5335 Bme1580I G_kGCm'C Cuts at: 1790 2036 2226 2315 2568 3396 4552 1790 Size: 246 190 89 253 828 1156 2573 Fragments arranged by size: 2573 1156 828 253 246 190 89 BmgBI CAC'GTC Cuts at: 1318 1318 Size: 5335 BmrI ACTGGGnnnn_n' Cuts at: 442 858 911 994 1393 1417 3066 4024 442 Size: 416 53 83 399 24 1649 958 1753 Fragments arranged by size: 1753 1649 958 416 399 83 53 24 BmtI G_CTAG'C Cuts at: 1056 1056 Size: 5335 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 1239 2445 2615 3995 1239 Size: 1206 170 1380 2579 Fragments arranged by size: 2579 1380 1206 170 BpuEI CTTGAGnnnnnnnnnnnnnn_nn' Cuts at: 3460 4325 4623 3460 Size: 865 298 4172 Fragments arranged by size: 4172 865 298 BsaI GGTCTCn'nnnn_ Cuts at: 882 1499 2135 2475 3998 882 Size: 617 636 340 1523 2219 Fragments arranged by size: 2219 1523 636 617 340 BsaAI yAC'GTr Cuts at: 493 1204 3126 493 Size: 711 1922 2702 Fragments arranged by size: 2702 1922 711 BsaBI GATnn'nnATC Cuts at: 5329 5329 Size: 5335 BsaHI Gr'CG_yC Cuts at: 275 328 411 597 1533 3142 3524 4159 275 Size: 53 83 186 936 1609 382 635 1451 Fragments arranged by size: 1609 1451 936 635 382 186 83 53 BsaWI w'CCGG_w Cuts at: 3768 4166 4440 4587 4998 3768 Size: 398 274 147 411 4105 Fragments arranged by size: 4105 411 398 274 147 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 1178 1208 1373 1403 1178 Size: 30 165 30 5110 Fragments arranged by size: 5110 165 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 1186 2125 2606 1186 Size: 939 481 3915 Fragments arranged by size: 3915 939 481 BseYI C'CCAG_C Cuts at: 2308 2382 4538 5034 2308 Size: 74 2156 496 2609 Fragments arranged by size: 2609 2156 496 74 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 1163 1736 2066 2150 2401 1163 Size: 573 330 84 251 4097 Fragments arranged by size: 4097 573 330 251 84 BsiEI CG_ry'CG Cuts at: 1540 1815 2001 2785 3546 4574 1540 Size: 275 186 784 761 1028 2301 Fragments arranged by size: 2301 1028 784 761 275 186 BsiHKAI G_wGCw'C Cuts at: 2517 3396 3481 4552 2517 Size: 879 85 1071 3300 Fragments arranged by size: 3300 1071 879 85 BsmI GAATG_Cn' Cuts at: 2846 2939 2846 Size: 93 5242 Bsp1286I G_dGCh'C Cuts at: 1391 1790 2036 2226 2315 2517 2568 2631 2654 Size: 399 246 190 89 202 51 63 23 Cuts at: 2654 3396 3481 4552 1391 Size: 742 85 1071 2174 Fragments arranged by size: 2174 1071 742 399 246 202 190 89 85 63 51 23 BspEI T'CCGG_A Cuts at: 4998 4998 Size: 5335 BspHI T'CATG_A Cuts at: 2550 3224 4954 2550 Size: 674 1730 2931 Fragments arranged by size: 2931 1730 674 BspMI ACCTGCnnnn'nnnn_ Cuts at: 844 2217 2690 844 Size: 1373 473 3489 Fragments arranged by size: 3489 1373 473 BsrBI CCG'CTC Cuts at: 1394 1823 3222 1394 Size: 429 1399 3507 Fragments arranged by size: 3507 1399 429 BsrDI GCAATG_nn' Cuts at: 65 1248 3830 4004 65 Size: 1183 2582 174 1396 Fragments arranged by size: 2582 1396 1183 174 BsrFI r'CCGG_y Cuts at: 1700 1810 3979 4166 1700 Size: 110 2169 187 2869 Fragments arranged by size: 2869 2169 187 110 BsrGI T'GTAC_A Cuts at: 96 96 Size: 5335 BssHII G'CGCG_C Cuts at: 1925 1925 Size: 5335 BssSI C'ACGA_G Cuts at: 3395 4407 3395 Size: 1012 4323 BstAPI GCAn_nnn'nTGC Cuts at: 794 2246 794 Size: 1452 3883 BstBI TT'CG_AA Cuts at: 4139 4139 Size: 5335 BstEII G'GTnAC_C Cuts at: 1184 1184 Size: 5335 BstXI CCAn_nnnn'nTGG Cuts at: 2595 2595 Size: 5335 BstYI r'GATC_y Cuts at: 1972 2665 3032 3417 3434 4886 4972 4984 5330 Size: 693 367 385 17 1452 86 12 346 Cuts at: 5330 1972 Size: 1977 Fragments arranged by size: 1977 1452 693 385 367 346 86 17 12 BtgI C'CryG_G Cuts at: 513 1065 2004 2493 513 Size: 552 939 489 3355 Fragments arranged by size: 3355 939 552 489 BtgZI GCGATGnnnnnnnnnn'nnnn_ Cuts at: 487 1170 1226 487 Size: 683 56 4596 Fragments arranged by size: 4596 683 56 BtsI GCAGTG_nn' Cuts at: 2092 2162 2851 3645 3665 2092 Size: 70 689 794 20 3762 Fragments arranged by size: 3762 794 689 70 20 ClaI AT'CG_AT Cuts at: 1554 1554 Size: 5335 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 529 564 529 Size: 35 5300 DraI TTT'AAA Cuts at: 2639 2639 Size: 5335 DraIII CAC_nnn'GTG Cuts at: 2342 2542 2342 Size: 200 5135 DrdI GACnn_nn'nnGTC Cuts at: 809 1316 4342 809 Size: 507 3026 1802 Fragments arranged by size: 3026 1802 507 EaeI y'GGCC_r Cuts at: 8 62 1487 1537 1812 1830 2199 2782 3671 Size: 54 1425 50 275 18 369 583 889 Cuts at: 3671 5300 8 Size: 1629 43 Fragments arranged by size: 1629 1425 889 583 369 275 54 50 43 18 EagI C'GGCC_G Cuts at: 1537 1812 2782 1537 Size: 275 970 4090 Fragments arranged by size: 4090 970 275 EarI CTCTTCn'nnn_ Cuts at: 1353 2066 3265 1353 Size: 713 1199 3423 Fragments arranged by size: 3423 1199 713 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 387 1451 1589 3922 4296 4442 387 Size: 1064 138 2333 374 146 1280 Fragments arranged by size: 2333 1280 1064 374 146 138 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 1239 1632 2445 2540 2615 3398 3995 4782 5050 Size: 393 813 95 75 783 597 787 268 Cuts at: 5050 1239 Size: 1524 Fragments arranged by size: 1524 813 787 783 597 393 268 95 75 EcoO109I rG'GnC_Cy Cuts at: 2056 2074 2312 2488 2056 Size: 18 238 176 4903 Fragments arranged by size: 4903 238 176 18 EcoRI G'AATT_C Cuts at: 2644 3022 2644 Size: 378 4957 FspI TGC'GCA Cuts at: 3841 3841 Size: 5335 HaeII r_GCGC'y Cuts at: 1678 4482 1678 Size: 2804 2531 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 1373 1405 1540 1572 2449 2481 3976 4008 4050 Size: 32 135 32 877 32 1495 32 42 Cuts at: 4050 4082 1373 Size: 32 2626 Fragments arranged by size: 2626 1495 877 135 42 32 32 32 32 32 HincII GTy'rAC Cuts at: 669 1657 1938 2679 2925 669 Size: 988 281 741 246 3079 Fragments arranged by size: 3079 988 741 281 246 HindIII A'AGCT_T Cuts at: 748 748 Size: 5335 HpaI GTT'AAC Cuts at: 2925 2925 Size: 5335 KpnI G_GTAC'C Cuts at: 2660 2660 Size: 5335 MfeI C'AATT_G Cuts at: 2934 2934 Size: 5335 MluI A'CGCG_T Cuts at: 5211 5211 Size: 5335 MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn' Cuts at: 1305 4449 4633 1305 Size: 3144 184 2007 Fragments arranged by size: 3144 2007 184 MscI TGG'CCA Cuts at: 10 64 1489 1832 2201 10 Size: 54 1425 343 369 3144 Fragments arranged by size: 3144 1425 369 343 54 MslI CAynn'nnrTG Cuts at: 518 1166 2042 3293 3652 3811 518 Size: 648 876 1251 359 159 2042 Fragments arranged by size: 2042 1251 876 648 359 159 MspA1I CmG'CkG Cuts at: 1606 2527 2751 3428 4576 4821 1606 Size: 921 224 677 1148 245 2120 Fragments arranged by size: 2120 1148 921 677 245 224 NcoI C'CATG_G Cuts at: 513 1065 2004 2493 513 Size: 552 939 489 3355 Fragments arranged by size: 3355 939 552 489 NdeI CA'TA_TG Cuts at: 387 387 Size: 5335 NheI G'CTAG_C Cuts at: 1052 1052 Size: 5335 NotI GC'GGCC_GC Cuts at: 2782 2782 Size: 5335 NspI r_CATG'y Cuts at: 1132 1229 2350 2693 4238 1132 Size: 97 1121 343 1545 2229 Fragments arranged by size: 2229 1545 1121 343 97 PasI CC'CwG_GG Cuts at: 1348 1348 Size: 5335 PciI A'CATG_T Cuts at: 4234 4234 Size: 5335 PflMI CCAn_nnn'nTGG Cuts at: 1108 1108 Size: 5335 PmeI GTTT'AAAC Cuts at: 2639 2639 Size: 5335 PpiI GAACnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 3404 3436 4917 4949 3404 Size: 32 1481 32 3790 Fragments arranged by size: 3790 1481 32 32 PpuMI rG'GwC_Cy Cuts at: 2488 2488 Size: 5335 PshAI GACnn'nnGTC Cuts at: 1613 1613 Size: 5335 PsiI TTA'TAA Cuts at: 2905 2905 Size: 5335 PspOMI G'GGCC_C Cuts at: 2311 2311 Size: 5335 PstI C_TGCA'G Cuts at: 830 2625 2687 830 Size: 1795 62 3478 Fragments arranged by size: 3478 1795 62 PvuI CG_AT'CG Cuts at: 2001 2001 Size: 5335 PvuII CAG'CTG Cuts at: 2527 2527 Size: 5335 SalI G'TCGA_C Cuts at: 1936 2677 1936 Size: 741 4594 SbfI CC_TGCA'GG Cuts at: 2625 2687 2625 Size: 62 5273 ScaI AGT'ACT Cuts at: 3583 5295 3583 Size: 1712 3623 SfcI C'TryA_G Cuts at: 826 1045 2621 2683 3818 4499 4690 826 Size: 219 1576 62 1135 681 191 1471 Fragments arranged by size: 1576 1471 1135 681 219 191 62 SgfI GCG_AT'CGC Cuts at: 2001 2001 Size: 5335 SgrAI Cr'CCGG_yG Cuts at: 1700 1700 Size: 5335 SmaI CCC'GGG Cuts at: 1872 2391 2662 1872 Size: 519 271 4545 Fragments arranged by size: 4545 519 271 SmlI C'TyrA_G Cuts at: 820 1017 1943 3439 4340 4602 820 Size: 197 926 1496 901 262 1553 Fragments arranged by size: 1553 1496 926 901 262 197 SnaBI TAC'GTA Cuts at: 493 3126 493 Size: 2633 2702 SpeI A'CTAG_T Cuts at: 152 152 Size: 5335 SphI G_CATG'C Cuts at: 1132 2693 1132 Size: 1561 3774 SspI AAT'ATT Cuts at: 5 52 3259 5 Size: 47 3207 2081 Fragments arranged by size: 3207 2081 47 StuI AGG'CCT Cuts at: 1517 1517 Size: 5335 StyI C'CwwG_G Cuts at: 513 1065 2004 2229 2301 2493 2774 513 Size: 552 939 225 72 192 281 3074 Fragments arranged by size: 3074 939 552 281 225 192 72 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 325 1580 3362 3379 3532 3717 4162 325 Size: 1255 1782 17 153 185 445 1498 Fragments arranged by size: 1782 1498 1255 445 185 153 17 TatI w'GTAC_w Cuts at: 96 370 450 483 534 1977 2107 2349 3581 Size: 274 80 33 51 1443 130 242 1232 Cuts at: 3581 5293 96 Size: 1712 138 Fragments arranged by size: 1712 1443 1232 274 242 138 130 80 51 33 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 5295 5327 5295 Size: 32 5303 Tth111I GACn'n_nGTC Cuts at: 1316 1316 Size: 5335 XbaI T'CTAG_A Cuts at: 2671 2671 Size: 5335 XhoI C'TCGA_G Cuts at: 1943 1943 Size: 5335 XmaI C'CCGG_G Cuts at: 1870 2389 2660 1870 Size: 519 271 4545 Fragments arranged by size: 4545 519 271 XmnI GAAnn'nnTTC Cuts at: 3464 3464 Size: 5335 ZraI GAC'GTC Cuts at: 276 329 412 598 1534 3143 276 Size: 53 83 186 936 1609 2468 Fragments arranged by size: 2468 1609 936 186 83 53 Enzymes that do cut: AatII AccI Acc65I AclI AcuI AflII AflIII AgeI AhdI AleI AlfI AlwNI ApaI ApaLI ApoI AseI AsiSI AvaI BamHI BanI BanII BbsI BcgI BciVI BclI BglI BglII BlpI Bme1580I BmgBI BmrI BmtI BpmI BpuEI BsaI BsaAI BsaBI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiEI BsiHKAI BsmI Bsp1286I BspEI BspHI BspMI BsrBI BsrDI BsrFI BsrGI BssHII BssSI BstAPI BstBI BstEII BstXI BstYI BtgI BtgZI BtsI ClaI CspCI DraI DraIII DrdI EaeI EagI EarI EciI Eco57MI EcoO109I EcoRI FspI HaeII Hin4I HincII HindIII HpaI KpnI MfeI MluI MmeI MscI MslI MspA1I NcoI NdeI NheI NotI NspI PasI PciI PflMI PmeI PpiI PpuMI PshAI PsiI PspOMI PstI PvuI PvuII SalI SbfI ScaI SfcI SgfI SgrAI SmaI SmlI SnaBI SpeI SphI SspI StuI StyI TaqII TatI TstI Tth111I XbaI XhoI XmaI XmnI ZraI Enzymes that do not cut: AarI AfeI AloI AscI AvrII BaeI BbeI BbvCI BfrBI BplI Bpu10I BsiWI BsmBI BstZ17I Bsu36I EcoICRI EcoNI EcoRV FalI FseI FspAI KasI NaeI NarI NgoMIV NruI NsiI PacI PfoI PmlI PspXI PsrI RsrII SacI SacII SanDI SapI SexAI SfiI SfoI SrfI SwaI XcmI