FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE3160, 380 aa 1>>>pF1KE3160 380 - 380 aa - 380 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.4941+/-0.000868; mu= 15.6263+/- 0.052 mean_var=68.1332+/-13.559, 0's: 0 Z-trim(106.0): 17 B-trim: 0 in 0/50 Lambda= 0.155380 statistics sampled from 8738 (8742) to 8738 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.645), E-opt: 0.2 (0.269), width: 16 Scan time: 2.730 The best scores are: opt bits E(32554) CCDS2826.1 NPRL2 gene_id:10641|Hs108|chr3 ( 380) 2548 580.2 1e-165 >>CCDS2826.1 NPRL2 gene_id:10641|Hs108|chr3 (380 aa) initn: 2548 init1: 2548 opt: 2548 Z-score: 3088.7 bits: 580.2 E(32554): 1e-165 Smith-Waterman score: 2548; 100.0% identity (100.0% similar) in 380 aa overlap (1-380:1-380) 10 20 30 40 50 60 pF1KE3 MGSGCRIECIFFSEFHPTLGPKITYQVPEDFISRELFDTVQVYIITKPELQNKLITVTAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS28 MGSGCRIECIFFSEFHPTLGPKITYQVPEDFISRELFDTVQVYIITKPELQNKLITVTAM 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE3 EKKLIGCPVCIEHKKYSRNALLFNLGFVCDAQAKTCALEPIVKKLAGYLTTLELESSFVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS28 EKKLIGCPVCIEHKKYSRNALLFNLGFVCDAQAKTCALEPIVKKLAGYLTTLELESSFVS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE3 MEESKQKLVPIMTILLEELNASGRCTLPIDESNTIHLKVIEQRPDPPVAQEYDVPVFTKD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS28 MEESKQKLVPIMTILLEELNASGRCTLPIDESNTIHLKVIEQRPDPPVAQEYDVPVFTKD 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE3 KEDFFNSQWDLTTQQILPYIDGFRHIQKISAEADVELNLVRIAIQNLLYYGVVTLVSILQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS28 KEDFFNSQWDLTTQQILPYIDGFRHIQKISAEADVELNLVRIAIQNLLYYGVVTLVSILQ 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE3 YSNVYCPTPKVQDLVDDKSLQEACLSYVTKQGHKRASLRDVFQLYCSLSPGTTVRDLIGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS28 YSNVYCPTPKVQDLVDDKSLQEACLSYVTKQGHKRASLRDVFQLYCSLSPGTTVRDLIGR 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE3 HPQQLQHVDERKLIQFGLMKNLIRRLQKYPVRVTREEQSHPARLYTGCHSYDEICCKTGM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS28 HPQQLQHVDERKLIQFGLMKNLIRRLQKYPVRVTREEQSHPARLYTGCHSYDEICCKTGM 310 320 330 340 350 360 370 380 pF1KE3 SYHELDERLENDPNIIICWK :::::::::::::::::::: CCDS28 SYHELDERLENDPNIIICWK 370 380 380 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 17:47:01 2016 done: Sun Nov 6 17:47:02 2016 Total Scan time: 2.730 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]