(Linear) (Six-base) MAPSORT of: KIEE1938.seq Check: 433 from: 1 to: 1440 KIEE1938.orf With 182 enzymes: SgfI * July 15, 2010 18:51 .. AcuI CTGAAGnnnnnnnnnnnnnn_nn' Cuts at: 0 971 1014 1440 Size: 971 43 426 Fragments arranged by size: 971 426 43 AleI CACnn'nnGTG Cuts at: 0 749 1440 Size: 749 691 AlwNI CAG_nnn'CTG Cuts at: 0 700 723 994 1037 1369 1440 Size: 700 23 271 43 332 71 Fragments arranged by size: 700 332 271 71 43 23 ApaI G_GGCC'C Cuts at: 0 354 611 1440 Size: 354 257 829 Fragments arranged by size: 829 354 257 ApaLI G'TGCA_C Cuts at: 0 964 1064 1440 Size: 964 100 376 Fragments arranged by size: 964 376 100 AvaI C'yCGr_G Cuts at: 0 374 1166 1440 Size: 374 792 274 Fragments arranged by size: 792 374 274 BamHI G'GATC_C Cuts at: 0 1409 1440 Size: 1409 31 BanII G_rGCy'C Cuts at: 0 354 437 611 1440 Size: 354 83 174 829 Fragments arranged by size: 829 354 174 83 BbsI GAAGACnn'nnnn_ Cuts at: 0 476 1440 Size: 476 964 BbvCI CC'TCA_GC Cuts at: 0 658 1440 Size: 658 782 BfrBI ATG'CAT Cuts at: 0 529 1440 Size: 529 911 BglI GCCn_nnn'nGGC Cuts at: 0 859 1440 Size: 859 581 BglII A'GATC_T Cuts at: 0 1328 1440 Size: 1328 112 Bme1580I G_kGCm'C Cuts at: 0 42 324 354 583 611 788 968 1068 Size: 42 282 30 229 28 177 180 100 Cuts at: 1068 1360 1440 Size: 292 80 Fragments arranged by size: 292 282 229 180 177 100 80 42 30 28 BmrI ACTGGGnnnn_n' Cuts at: 0 605 1440 Size: 605 835 BplI GAGnnnnnCTCnnnnnnnn_nnnnn' Cuts at: 0 207 1350 1440 Size: 207 1143 90 Fragments arranged by size: 1143 207 90 BpmI CTGGAGnnnnnnnnnnnnnn_nn' Cuts at: 0 109 346 722 1440 Size: 109 237 376 718 Fragments arranged by size: 718 376 237 109 Bpu10I CC'TnA_GC Cuts at: 0 116 658 1440 Size: 116 542 782 Fragments arranged by size: 782 542 116 BsaAI yAC'GTr Cuts at: 0 858 1324 1440 Size: 858 466 116 Fragments arranged by size: 858 466 116 BsaHI Gr'CG_yC Cuts at: 0 7 85 1440 Size: 7 78 1355 Fragments arranged by size: 1355 78 7 BsaWI w'CCGG_w Cuts at: 0 1406 1440 Size: 1406 34 BsaXI ACnnnnnCTCCnnnnnnn_nnn' Cuts at: 0 780 810 1232 1262 1440 Size: 780 30 422 30 178 Fragments arranged by size: 780 422 178 30 30 BseRI GAGGAGnnnnnnnn_nn' Cuts at: 0 719 1440 Size: 719 721 BseYI C'CCAG_C Cuts at: 0 884 1059 1359 1440 Size: 884 175 300 81 Fragments arranged by size: 884 300 175 81 BsgI GTGCAGnnnnnnnnnnnnnn_nn' Cuts at: 0 472 659 930 1440 Size: 472 187 271 510 Fragments arranged by size: 510 472 271 187 BsiHKAI G_wGCw'C Cuts at: 0 383 437 716 968 1068 1440 Size: 383 54 279 252 100 372 Fragments arranged by size: 383 372 279 252 100 54 BsmI GAATG_Cn' Cuts at: 0 571 1440 Size: 571 869 BsmBI CGTCTCn'nnnn_ Cuts at: 0 133 1042 1440 Size: 133 909 398 Fragments arranged by size: 909 398 133 Bsp1286I G_dGCh'C Cuts at: 0 42 324 354 383 437 583 611 716 Size: 42 282 30 29 54 146 28 105 Cuts at: 716 788 968 1068 1360 1440 Size: 72 180 100 292 80 Fragments arranged by size: 292 282 180 146 105 100 80 72 54 42 30 29 28 BspMI ACCTGCnnnn'nnnn_ Cuts at: 0 135 566 1440 Size: 135 431 874 Fragments arranged by size: 874 431 135 BsrBI CCG'CTC Cuts at: 0 65 1440 Size: 65 1375 BsrDI GCAATG_nn' Cuts at: 0 863 1440 Size: 863 577 BsrFI r'CCGG_y Cuts at: 0 69 1440 Size: 69 1371 BssHII G'CGCG_C Cuts at: 0 54 1440 Size: 54 1386 BssSI C'ACGA_G Cuts at: 0 635 1440 Size: 635 805 BstAPI GCAn_nnn'nTGC Cuts at: 0 1128 1440 Size: 1128 312 BstXI CCAn_nnnn'nTGG Cuts at: 0 981 1440 Size: 981 459 BstYI r'GATC_y Cuts at: 0 414 821 1328 1409 1440 Size: 414 407 507 81 31 Fragments arranged by size: 507 414 407 81 31 BtgI C'CryG_G Cuts at: 0 11 760 1148 1440 Size: 11 749 388 292 Fragments arranged by size: 749 388 292 11 BtsI GCAGTG_nn' Cuts at: 0 324 822 1129 1370 1440 Size: 324 498 307 241 70 Fragments arranged by size: 498 324 307 241 70 ClaI AT'CG_AT Cuts at: 0 1094 1440 Size: 1094 346 CspCI CAAnnnnnGTGGnnnnnnnnnn_nn' Cuts at: 0 1105 1140 1440 Size: 1105 35 300 Fragments arranged by size: 1105 300 35 EaeI y'GGCC_r Cuts at: 0 860 917 933 998 1260 1440 Size: 860 57 16 65 262 180 Fragments arranged by size: 860 262 180 65 57 16 EciI GGCGGAnnnnnnnnn_nn' Cuts at: 0 814 1440 Size: 814 626 EcoICRI GAG'CTC Cuts at: 0 435 1440 Size: 435 1005 Eco57MI CTGrAGnnnnnnnnnnnnnn_nn' Cuts at: 0 109 346 722 971 1014 1440 Size: 109 237 376 249 43 426 Fragments arranged by size: 426 376 249 237 109 43 EcoNI CCTnn'n_nnAGG Cuts at: 0 328 1440 Size: 328 1112 EcoO109I rG'GnC_Cy Cuts at: 0 350 607 675 877 1440 Size: 350 257 68 202 563 Fragments arranged by size: 563 350 257 202 68 HaeII r_GCGC'y Cuts at: 0 124 406 1440 Size: 124 282 1034 Fragments arranged by size: 1034 282 124 Hin4I GAynnnnnvTCnnnnnnnn_nnnnn' Cuts at: 0 530 562 1232 1264 1440 Size: 530 32 670 32 176 Fragments arranged by size: 670 530 176 32 32 MscI TGG'CCA Cuts at: 0 862 919 1000 1440 Size: 862 57 81 440 Fragments arranged by size: 862 440 81 57 MslI CAynn'nnrTG Cuts at: 0 359 749 833 1208 1440 Size: 359 390 84 375 232 Fragments arranged by size: 390 375 359 232 84 MspA1I CmG'CkG Cuts at: 0 700 1440 Size: 700 740 NaeI GCC'GGC Cuts at: 0 71 1440 Size: 71 1369 NcoI C'CATG_G Cuts at: 0 760 1440 Size: 760 680 NdeI CA'TA_TG Cuts at: 0 768 1440 Size: 768 672 NgoMIV G'CCGG_C Cuts at: 0 69 1440 Size: 69 1371 NsiI A_TGCA'T Cuts at: 0 531 1440 Size: 531 909 NspI r_CATG'y Cuts at: 0 565 1425 1440 Size: 565 860 15 Fragments arranged by size: 860 565 15 PflMI CCAn_nnn'nTGG Cuts at: 0 600 1440 Size: 600 840 PmlI CAC'GTG Cuts at: 0 858 1440 Size: 858 582 PpuMI rG'GwC_Cy Cuts at: 0 877 1440 Size: 877 563 PspOMI G'GGCC_C Cuts at: 0 350 607 1440 Size: 350 257 833 Fragments arranged by size: 833 350 257 PvuII CAG'CTG Cuts at: 0 700 1440 Size: 700 740 SacI G_AGCT'C Cuts at: 0 437 1440 Size: 437 1003 SfcI C'TryA_G Cuts at: 0 366 459 1440 Size: 366 93 981 Fragments arranged by size: 981 366 93 SmaI CCC'GGG Cuts at: 0 376 1168 1440 Size: 376 792 272 Fragments arranged by size: 792 376 272 SphI G_CATG'C Cuts at: 0 565 1440 Size: 565 875 StyI C'CwwG_G Cuts at: 0 410 760 1440 Size: 410 350 680 Fragments arranged by size: 680 410 350 TaqII GACCGAnnnnnnnnn_nn' Cuts at: 0 430 664 1051 1097 1440 Size: 430 234 387 46 343 Fragments arranged by size: 430 387 343 234 46 TatI w'GTAC_w Cuts at: 0 1340 1440 Size: 1340 100 TstI CACnnnnnnTCCnnnnnnn_nnnnn' Cuts at: 0 780 812 1440 Size: 780 32 628 Fragments arranged by size: 780 628 32 XbaI T'CTAG_A Cuts at: 0 1206 1440 Size: 1206 234 XcmI CCAnnnn_n'nnnnTGG Cuts at: 0 207 1440 Size: 207 1233 XmaI C'CCGG_G Cuts at: 0 374 1166 1440 Size: 374 792 274 Fragments arranged by size: 792 374 274 Enzymes that do cut: AcuI AleI AlwNI ApaI ApaLI AvaI BamHI BanII BbsI BbvCI BfrBI BglI BglII Bme1580I BmrI BplI BpmI Bpu10I BsaAI BsaHI BsaWI BsaXI BseRI BseYI BsgI BsiHKAI BsmI BsmBI Bsp1286I BspMI BsrBI BsrDI BsrFI BssHII BssSI BstAPI BstXI BstYI BtgI BtsI ClaI CspCI EaeI EciI EcoICRI Eco57MI EcoNI EcoO109I HaeII Hin4I MscI MslI MspA1I NaeI NcoI NdeI NgoMIV NsiI NspI PflMI PmlI PpuMI PspOMI PvuII SacI SfcI SmaI SphI StyI TaqII TatI TstI XbaI XcmI XmaI Enzymes that do not cut: AarI AatII AccI Acc65I AclI AfeI AflII AflIII AgeI AhdI AlfI AloI ApoI AscI AseI AsiSI AvrII BaeI BanI BbeI BcgI BciVI BclI BlpI BmgBI BmtI BpuEI BsaI BsaBI BsiEI BsiWI BspEI BspHI BsrGI BstBI BstEII BstZ17I Bsu36I BtgZI DraI DraIII DrdI EagI EarI EcoRI EcoRV FalI FseI FspI FspAI HincII HindIII HpaI KasI KpnI MfeI MluI MmeI NarI NheI NotI NruI PacI PasI PciI PfoI PmeI PpiI PshAI PsiI PspXI PsrI PstI PvuI RsrII SacII SalI SanDI SapI SbfI ScaI SexAI SfiI SfoI SgfI SgrAI SmlI SnaBI SpeI SrfI SspI StuI SwaI Tth111I XhoI XmnI ZraI