FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2396, 258 aa 1>>>pF1KE2396 258 - 258 aa - 258 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.7654+/-0.000772; mu= 8.3184+/- 0.047 mean_var=98.8861+/-19.687, 0's: 0 Z-trim(110.6): 10 B-trim: 0 in 0/52 Lambda= 0.128975 statistics sampled from 11761 (11768) to 11761 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.73), E-opt: 0.2 (0.361), width: 16 Scan time: 2.380 The best scores are: opt bits E(32554) CCDS46772.1 SGO1 gene_id:151648|Hs108|chr3 ( 258) 1677 321.8 2.9e-88 CCDS2635.1 SGO1 gene_id:151648|Hs108|chr3 ( 292) 1641 315.2 3.3e-86 CCDS46774.1 SGO1 gene_id:151648|Hs108|chr3 ( 275) 1043 203.9 9.8e-53 CCDS46771.1 SGO1 gene_id:151648|Hs108|chr3 ( 309) 1043 203.9 1.1e-52 CCDS56243.1 SGO1 gene_id:151648|Hs108|chr3 ( 215) 1032 201.8 3.3e-52 CCDS46773.1 SGO1 gene_id:151648|Hs108|chr3 ( 527) 1032 201.9 7.2e-52 CCDS33716.1 SGO1 gene_id:151648|Hs108|chr3 ( 561) 1032 202.0 7.6e-52 >>CCDS46772.1 SGO1 gene_id:151648|Hs108|chr3 (258 aa) initn: 1677 init1: 1677 opt: 1677 Z-score: 1698.2 bits: 321.8 E(32554): 2.9e-88 Smith-Waterman score: 1677; 100.0% identity (100.0% similar) in 258 aa overlap (1-258:1-258) 10 20 30 40 50 60 pF1KE2 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI 190 200 210 220 230 240 250 pF1KE2 FKQKKDLRRSKKSMKQIQ :::::::::::::::::: CCDS46 FKQKKDLRRSKKSMKQIQ 250 >>CCDS2635.1 SGO1 gene_id:151648|Hs108|chr3 (292 aa) initn: 1640 init1: 1640 opt: 1641 Z-score: 1661.2 bits: 315.2 E(32554): 3.3e-86 Smith-Waterman score: 1641; 98.1% identity (98.8% similar) in 257 aa overlap (1-257:1-257) 10 20 30 40 50 60 pF1KE2 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS26 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS26 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS26 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS26 YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI 190 200 210 220 230 240 250 pF1KE2 FKQKKDLRRSKKSMKQIQ :::::::::::: .. CCDS26 FKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFPDCRKCKLETHICLR 250 260 270 280 290 >>CCDS46774.1 SGO1 gene_id:151648|Hs108|chr3 (275 aa) initn: 1663 init1: 1024 opt: 1043 Z-score: 1060.2 bits: 203.9 E(32554): 9.8e-53 Smith-Waterman score: 1633; 93.8% identity (93.8% similar) in 275 aa overlap (1-258:1-275) 10 20 30 40 50 60 pF1KE2 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 70 80 90 100 110 120 130 140 150 160 pF1KE2 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIE-----------------ATPPE :::::::::::::::::::::::::::::::::::::: ::::: CCDS46 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSATPPE 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE2 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK 190 200 210 220 230 240 230 240 250 pF1KE2 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQIQ ::::::::::::::::::::::::::::::::::: CCDS46 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQIQ 250 260 270 >>CCDS46771.1 SGO1 gene_id:151648|Hs108|chr3 (309 aa) initn: 1626 init1: 1024 opt: 1043 Z-score: 1059.4 bits: 203.9 E(32554): 1.1e-52 Smith-Waterman score: 1597; 92.0% identity (92.7% similar) in 274 aa overlap (1-257:1-274) 10 20 30 40 50 60 pF1KE2 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 70 80 90 100 110 120 130 140 150 160 pF1KE2 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIE-----------------ATPPE :::::::::::::::::::::::::::::::::::::: ::::: CCDS46 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSATPPE 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE2 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 TQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASK 190 200 210 220 230 240 230 240 250 pF1KE2 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQIQ ::::::::::::::::::::::::::::: .. CCDS46 LRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAIFILYYVREFVSRFPDCRKC 250 260 270 280 290 300 CCDS46 KLETHICLR >>CCDS56243.1 SGO1 gene_id:151648|Hs108|chr3 (215 aa) initn: 1024 init1: 1024 opt: 1032 Z-score: 1050.8 bits: 201.8 E(32554): 3.3e-52 Smith-Waterman score: 1032; 96.4% identity (96.4% similar) in 166 aa overlap (1-166:1-166) 10 20 30 40 50 60 pF1KE2 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS56 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL :::::::::::::::::::::::::::::::::::::: : : CCDS56 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSGALEV 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI CCDS56 SPAKEAIFILYYVREFVSRFPDCRKCKLETHICLR 190 200 210 >>CCDS46773.1 SGO1 gene_id:151648|Hs108|chr3 (527 aa) initn: 1658 init1: 1024 opt: 1032 Z-score: 1044.7 bits: 201.9 E(32554): 7.2e-52 Smith-Waterman score: 1032; 96.4% identity (96.4% similar) in 166 aa overlap (1-166:1-166) 10 20 30 40 50 60 pF1KE2 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL :::::::::::::::::::::::::::::::::::::: : : CCDS46 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSGEAKS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI CCDS46 TDNVLPRTVSVRSSLKKHCNSICQFDSLDDFETSHLAGKSFEFERVGFLDPLVNMHIPEN 190 200 210 220 230 240 >-- initn: 683 init1: 648 opt: 665 Z-score: 675.7 bits: 133.7 E(32554): 2.6e-31 Smith-Waterman score: 665; 75.7% identity (84.7% similar) in 144 aa overlap (118-258:386-527) 90 100 110 120 130 140 pF1KE2 ECYYLTCQLYALKGKLTSQQTVEPAQNQEICSSGMDPNSDDS---SRNLFVKDLPQIPLE :. ..:.:... .: : . : . CCDS46 SNREENNESEVSLCESSGSGDDSDDLYLPTCKYIQNPTSNSDRPVTRPLAKRALKYTDEK 360 370 380 390 400 410 150 160 170 180 190 200 pF1KE2 ETELPGQGESFQIEATPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVAL ::: :. . .::::::::::::::::::::::::::::::::::::::::::::: CCDS46 ETE--GSKPTKTPTTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVAL 420 430 440 450 460 470 210 220 230 240 250 pF1KE2 PKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 PKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQIQ 480 490 500 510 520 >>CCDS33716.1 SGO1 gene_id:151648|Hs108|chr3 (561 aa) initn: 1621 init1: 1024 opt: 1032 Z-score: 1044.3 bits: 202.0 E(32554): 7.6e-52 Smith-Waterman score: 1032; 96.4% identity (96.4% similar) in 166 aa overlap (1-166:1-166) 10 20 30 40 50 60 pF1KE2 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 MAKERCLKKSFQDSLEDIKKRMKEKRNKNLAEIGKRRSFIAAPCQIITNTSTLLKNYQDN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 NKMLVLALENEKSKVKEAQDIILQLRKECYYLTCQLYALKGKLTSQQTVEPAQNQEICSS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEATPPETQQSPHLSLKDITNVSL :::::::::::::::::::::::::::::::::::::: : : CCDS33 GMDPNSDDSSRNLFVKDLPQIPLEETELPGQGESFQIEDQIPTIPQDTLGVDFDSGEAKS 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE2 YPVVKIRRLSLSPKKNKASPAVALPKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPI CCDS33 TDNVLPRTVSVRSSLKKHCNSICQFDSLDDFETSHLAGKSFEFERVGFLDPLVNMHIPEN 190 200 210 220 230 240 >-- initn: 646 init1: 611 opt: 629 Z-score: 639.0 bits: 127.0 E(32554): 2.8e-29 Smith-Waterman score: 629; 72.0% identity (82.5% similar) in 143 aa overlap (118-257:386-526) 90 100 110 120 130 140 pF1KE2 ECYYLTCQLYALKGKLTSQQTVEPAQNQEICSSGMDPNSDDS---SRNLFVKDLPQIPLE :. ..:.:... .: : . : . CCDS33 SNREENNESEVSLCESSGSGDDSDDLYLPTCKYIQNPTSNSDRPVTRPLAKRALKYTDEK 360 370 380 390 400 410 150 160 170 180 190 200 pF1KE2 ETELPGQGESFQIEATPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVAL ::: :. . .::::::::::::::::::::::::::::::::::::::::::::: CCDS33 ETE--GSKPTKTPTTTPPETQQSPHLSLKDITNVSLYPVVKIRRLSLSPKKNKASPAVAL 420 430 440 450 460 470 210 220 230 240 250 pF1KE2 PKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKSMKQIQ :::::::::::::::::::::::::::::::::::::::::::::::: .. CCDS33 PKRRCTASVNYKEPTLASKLRRGDPFTDLCFLNSPIFKQKKDLRRSKKRALEVSPAKEAI 480 490 500 510 520 530 CCDS33 FILYYVREFVSRFPDCRKCKLETHICLR 540 550 560 258 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 09:21:28 2016 done: Sun Nov 6 09:21:29 2016 Total Scan time: 2.380 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]