FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB5921, 505 aa 1>>>pF1KB5921 505 - 505 aa - 505 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.0133+/-0.000934; mu= 3.2314+/- 0.057 mean_var=266.3111+/-54.809, 0's: 0 Z-trim(113.6): 177 B-trim: 7 in 1/52 Lambda= 0.078592 statistics sampled from 14073 (14263) to 14073 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.768), E-opt: 0.2 (0.438), width: 16 Scan time: 3.810 The best scores are: opt bits E(32554) CCDS2448.1 PAX3 gene_id:5077|Hs108|chr2 ( 505) 3435 402.7 4.8e-112 CCDS42825.1 PAX3 gene_id:5077|Hs108|chr2 ( 484) 3294 386.7 3.1e-107 CCDS46522.1 PAX3 gene_id:5077|Hs108|chr2 ( 483) 3275 384.6 1.4e-106 CCDS42826.1 PAX3 gene_id:5077|Hs108|chr2 ( 479) 3224 378.8 7.4e-105 CCDS2450.1 PAX3 gene_id:5077|Hs108|chr2 ( 403) 2658 314.5 1.4e-85 CCDS2449.1 PAX3 gene_id:5077|Hs108|chr2 ( 407) 2658 314.5 1.4e-85 CCDS44074.1 PAX7 gene_id:5081|Hs108|chr1 ( 505) 2515 298.4 1.2e-80 CCDS44075.1 PAX7 gene_id:5081|Hs108|chr1 ( 518) 2511 298.0 1.7e-80 CCDS186.1 PAX7 gene_id:5081|Hs108|chr1 ( 520) 2497 296.4 5.1e-80 CCDS2451.1 PAX3 gene_id:5077|Hs108|chr2 ( 206) 1321 162.7 3.7e-40 CCDS46523.1 PAX3 gene_id:5077|Hs108|chr2 ( 215) 1316 162.1 5.6e-40 CCDS74709.1 PAX1 gene_id:5075|Hs108|chr20 ( 457) 684 90.8 3.6e-18 CCDS6607.1 PAX5 gene_id:5079|Hs108|chr9 ( 391) 682 90.5 3.7e-18 CCDS13146.2 PAX1 gene_id:5075|Hs108|chr20 ( 534) 684 90.8 4e-18 CCDS65048.1 PAX5 gene_id:5079|Hs108|chr9 ( 362) 669 89.0 9.8e-18 CCDS65042.1 PAX5 gene_id:5079|Hs108|chr9 ( 319) 666 88.6 1.1e-17 CCDS65044.1 PAX5 gene_id:5079|Hs108|chr9 ( 295) 665 88.4 1.2e-17 CCDS65043.1 PAX5 gene_id:5079|Hs108|chr9 ( 348) 666 88.6 1.2e-17 CCDS46398.1 PAX8 gene_id:7849|Hs108|chr2 ( 450) 668 88.9 1.2e-17 CCDS65045.1 PAX5 gene_id:5079|Hs108|chr9 ( 324) 660 87.9 1.8e-17 CCDS65046.1 PAX5 gene_id:5079|Hs108|chr9 ( 328) 660 87.9 1.9e-17 CCDS65047.1 PAX5 gene_id:5079|Hs108|chr9 ( 357) 660 87.9 2e-17 CCDS41561.1 PAX2 gene_id:5076|Hs108|chr10 ( 394) 655 87.4 3.1e-17 CCDS7499.1 PAX2 gene_id:5076|Hs108|chr10 ( 396) 655 87.4 3.1e-17 CCDS9662.1 PAX9 gene_id:5083|Hs108|chr14 ( 341) 648 86.6 4.9e-17 CCDS42735.1 PAX8 gene_id:7849|Hs108|chr2 ( 287) 636 85.1 1.1e-16 CCDS46399.1 PAX8 gene_id:7849|Hs108|chr2 ( 398) 638 85.5 1.2e-16 CCDS42736.1 PAX8 gene_id:7849|Hs108|chr2 ( 321) 636 85.2 1.2e-16 CCDS31451.1 PAX6 gene_id:5080|Hs108|chr11 ( 422) 607 82.0 1.4e-15 >>CCDS2448.1 PAX3 gene_id:5077|Hs108|chr2 (505 aa) initn: 3435 init1: 3435 opt: 3435 Z-score: 2125.0 bits: 402.7 E(32554): 4.8e-112 Smith-Waterman score: 3435; 100.0% identity (100.0% similar) in 505 aa overlap (1-505:1-505) 10 20 30 40 50 60 pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB5 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB5 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB5 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB5 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB5 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK 430 440 450 460 470 480 490 500 pF1KB5 PDIAWFQILLNTFDKSSGEEEDLEQ ::::::::::::::::::::::::: CCDS24 PDIAWFQILLNTFDKSSGEEEDLEQ 490 500 >>CCDS42825.1 PAX3 gene_id:5077|Hs108|chr2 (484 aa) initn: 3294 init1: 3294 opt: 3294 Z-score: 2038.8 bits: 386.7 E(32554): 3.1e-107 Smith-Waterman score: 3294; 100.0% identity (100.0% similar) in 484 aa overlap (1-484:1-484) 10 20 30 40 50 60 pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB5 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB5 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB5 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB5 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB5 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK 430 440 450 460 470 480 490 500 pF1KB5 PDIAWFQILLNTFDKSSGEEEDLEQ :::: CCDS42 PDIA >>CCDS46522.1 PAX3 gene_id:5077|Hs108|chr2 (483 aa) initn: 2544 init1: 2544 opt: 3275 Z-score: 2027.2 bits: 384.6 E(32554): 1.4e-106 Smith-Waterman score: 3275; 99.8% identity (99.8% similar) in 484 aa overlap (1-484:1-483) 10 20 30 40 50 60 pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE ::::::::::::::::::::::::::::::::::::::::::::::: :::::::::::: CCDS46 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPK-VTTPDVEKKIEE 70 80 90 100 110 130 140 150 160 170 180 pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES 120 130 140 150 160 170 190 200 210 220 230 240 pF1KB5 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER 180 190 200 210 220 230 250 260 270 280 290 300 pF1KB5 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP 240 250 260 270 280 290 310 320 330 340 350 360 pF1KB5 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR 300 310 320 330 340 350 370 380 390 400 410 420 pF1KB5 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE 360 370 380 390 400 410 430 440 450 460 470 480 pF1KB5 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK 420 430 440 450 460 470 490 500 pF1KB5 PDIAWFQILLNTFDKSSGEEEDLEQ :::: CCDS46 PDIA 480 >>CCDS42826.1 PAX3 gene_id:5077|Hs108|chr2 (479 aa) initn: 3224 init1: 3224 opt: 3224 Z-score: 1996.0 bits: 378.8 E(32554): 7.4e-105 Smith-Waterman score: 3224; 100.0% identity (100.0% similar) in 474 aa overlap (1-474:1-474) 10 20 30 40 50 60 pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB5 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB5 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB5 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB5 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB5 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS42 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSKPWTF 430 440 450 460 470 490 500 pF1KB5 PDIAWFQILLNTFDKSSGEEEDLEQ >>CCDS2450.1 PAX3 gene_id:5077|Hs108|chr2 (403 aa) initn: 2657 init1: 2657 opt: 2658 Z-score: 1650.1 bits: 314.5 E(32554): 1.4e-85 Smith-Waterman score: 2658; 98.2% identity (99.5% similar) in 399 aa overlap (1-399:1-399) 10 20 30 40 50 60 pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB5 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB5 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB5 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB5 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE :::::::::::::::::::::::::::::::: ..... CCDS24 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVPFIISSQISRK 370 380 390 400 430 440 450 460 470 480 pF1KB5 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK >>CCDS2449.1 PAX3 gene_id:5077|Hs108|chr2 (407 aa) initn: 2657 init1: 2657 opt: 2658 Z-score: 1650.0 bits: 314.5 E(32554): 1.4e-85 Smith-Waterman score: 2658; 98.2% identity (99.5% similar) in 399 aa overlap (1-399:1-399) 10 20 30 40 50 60 pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB5 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB5 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 THYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAMP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB5 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 TLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNPDSSSAYCLPSTR 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB5 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLTGGLE :::::::::::::::::::::::::::::::: ..... CCDS24 HGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVPFIISSQISLGFKSF 370 380 390 400 430 440 450 460 470 480 pF1KB5 PTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAFHYLK >>CCDS44074.1 PAX7 gene_id:5081|Hs108|chr1 (505 aa) initn: 2344 init1: 1050 opt: 2515 Z-score: 1561.2 bits: 298.4 E(32554): 1.2e-80 Smith-Waterman score: 2515; 76.3% identity (89.8% similar) in 490 aa overlap (1-484:1-478) 10 20 30 40 50 60 pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV :..: :.:::::::.:::::::.::::::::::::::::::::::::::::::::::::: CCDS44 MAALPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE ::::::::::::::::::::::::::::::::::::::::::::::.::.:::::::::: CCDS44 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKKIEE 70 80 90 100 110 120 130 140 150 160 170 pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPS--VSSISRILRSKFGKGEEE-EADLERKEA :::::::::::::::.::::. :::.:::: ::::::.:: :::: ::: ::: :. CCDS44 YKRENPGMFSWEIRDRLLKDGHCDRSTVPSGLVSSISRVLRIKFGKKEEEDEAD---KKE 130 140 150 160 170 180 190 200 210 220 230 pF1KB5 EESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERA ...::::::::::::..... . :::::..:::::::::::::::::::::::::::.: CCDS44 DDGEKKAKHSIDGILGDKGN--RLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKA 180 190 200 210 220 230 240 250 260 270 280 290 pF1KB5 FERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPT ::::::::::::::::::.::::::::::::::::::::::::::: :::::.::::::: CCDS44 FERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPT 240 250 260 270 280 290 300 310 320 330 340 350 pF1KB5 AMPTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNP---DSSSAY .::::: ::: ...: :.: : : .:::::::::::::.::. . . :.:::: CCDS44 GMPTLPPYQLPDSTYPTTTISQ---DGGSTVHRPQPLPPSTMHQGGLAAAAAAADTSSAY 300 310 320 330 340 350 360 370 380 390 400 410 pF1KB5 CLPSTRHGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSP ..::.::::.:::. :..::: ::: ..::::::::..: : ..:: :::.:...:: CCDS44 ---GARHSFSSYSDSFMNPAAPSNHMNP-VSNGLSPQVMSILGNPSAVPPQPQADFSISP 360 370 380 390 400 420 430 440 450 460 470 pF1KB5 LTGGLEPTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQS : :::. .:..::::::: : .: :::::::.::::::::::::.:::.:::::::::. CCDS44 LHGGLDSATSISASCSQRADSIKPGDSLPTSQAYCPPTYSTTGYSVDPVAGYQYGQYGQT 410 420 430 440 450 460 480 490 500 pF1KB5 AFHYLKPDIAWFQILLNTFDKSSGEEEDLEQ : :: ... CCDS44 AVDYLAKNVSLSTQRRMKLGEHSAVLGLLPVETGQAY 470 480 490 500 >>CCDS44075.1 PAX7 gene_id:5081|Hs108|chr1 (518 aa) initn: 1919 init1: 1079 opt: 2511 Z-score: 1558.6 bits: 298.0 E(32554): 1.7e-80 Smith-Waterman score: 2511; 77.8% identity (90.8% similar) in 478 aa overlap (1-474:1-466) 10 20 30 40 50 60 pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV :..: :.:::::::.:::::::.::::::::::::::::::::::::::::::::::::: CCDS44 MAALPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE ::::::::::::::::::::::::::::::::::::::::::::::.::.:::::::::: CCDS44 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKKIEE 70 80 90 100 110 120 130 140 150 160 170 pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEE-EADLERKEAEE :::::::::::::::.::::. :::.::::::::::.:: :::: ::: ::: :. .. CCDS44 YKRENPGMFSWEIRDRLLKDGHCDRSTVPSVSSISRVLRIKFGKKEEEDEAD---KKEDD 130 140 150 160 170 180 190 200 210 220 230 pF1KB5 SEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFE .::::::::::::..... . :::::..:::::::::::::::::::::::::::.::: CCDS44 GEKKAKHSIDGILGDKGN--RLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFE 180 190 200 210 220 230 240 250 260 270 280 290 pF1KB5 RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPTAM ::::::::::::::::.::::::::::::::::::::::::::: :::::.:::::::.: CCDS44 RTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGM 240 250 260 270 280 290 300 310 320 330 340 350 pF1KB5 PTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNP---DSSSAYCL :::: ::: ...: :.: : : .:::::::::::::.::. . . :.:::: CCDS44 PTLPPYQLPDSTYPTTTISQ---DGGSTVHRPQPLPPSTMHQGGLAAAAAAADTSSAY-- 300 310 320 330 340 350 360 370 380 390 400 410 pF1KB5 PSTRHGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSPLT ..::.::::.:::. :..::: ::: ..::::::::..: : ..:: :::.:...::: CCDS44 -GARHSFSSYSDSFMNPAAPSNHMNP-VSNGLSPQVMSILGNPSAVPPQPQADFSISPLH 360 370 380 390 400 420 430 440 450 460 470 pF1KB5 GGLEPTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQSAF :::. .:..::::::: : .: :::::::.::::::::::::.:::.:::::::::: CCDS44 GGLDSATSISASCSQRADSIKPGDSLPTSQAYCPPTYSTTGYSVDPVAGYQYGQYGQSEC 410 420 430 440 450 460 480 490 500 pF1KB5 HYLKPDIAWFQILLNTFDKSSGEEEDLEQ CCDS44 LVPWASPVPIPSPTPRASCLFMESYKVVSGWGMSISQMEKLKSSQMEQFT 470 480 490 500 510 >>CCDS186.1 PAX7 gene_id:5081|Hs108|chr1 (520 aa) initn: 1884 init1: 1050 opt: 2497 Z-score: 1550.0 bits: 296.4 E(32554): 5.1e-80 Smith-Waterman score: 2497; 77.5% identity (90.4% similar) in 480 aa overlap (1-474:1-468) 10 20 30 40 50 60 pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV :..: :.:::::::.:::::::.::::::::::::::::::::::::::::::::::::: CCDS18 MAALPGTVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE ::::::::::::::::::::::::::::::::::::::::::::::.::.:::::::::: CCDS18 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKKIEE 70 80 90 100 110 120 130 140 150 160 170 pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPS--VSSISRILRSKFGKGEEE-EADLERKEA :::::::::::::::.::::. :::.:::: ::::::.:: :::: ::: ::: :. CCDS18 YKRENPGMFSWEIRDRLLKDGHCDRSTVPSGLVSSISRVLRIKFGKKEEEDEAD---KKE 130 140 150 160 170 180 190 200 210 220 230 pF1KB5 EESEKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERA ...::::::::::::..... . :::::..:::::::::::::::::::::::::::.: CCDS18 DDGEKKAKHSIDGILGDKGN--RLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKA 180 190 200 210 220 230 240 250 260 270 280 290 pF1KB5 FERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPT ::::::::::::::::::.::::::::::::::::::::::::::: :::::.::::::: CCDS18 FERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPT 240 250 260 270 280 290 300 310 320 330 340 350 pF1KB5 AMPTLPTYQLSETSYQPTSIPQAVSDPSSTVHRPQPLPPSTVHQSTIPSNP---DSSSAY .::::: ::: ...: :.: : : .:::::::::::::.::. . . :.:::: CCDS18 GMPTLPPYQLPDSTYPTTTISQ---DGGSTVHRPQPLPPSTMHQGGLAAAAAAADTSSAY 300 310 320 330 340 350 360 370 380 390 400 410 pF1KB5 CLPSTRHGFSSYTDSFVPPSGPSNPMNPTIGNGLSPQVMGLLTNHGGVPHQPQTDYALSP ..::.::::.:::. :..::: ::: ..::::::::..: : ..:: :::.:...:: CCDS18 ---GARHSFSSYSDSFMNPAAPSNHMNP-VSNGLSPQVMSILGNPSAVPPQPQADFSISP 360 370 380 390 400 420 430 440 450 460 470 pF1KB5 LTGGLEPTTTVSASCSQRLDHMKSLDSLPTSQSYCPPTYSTTGYSMDPVTGYQYGQYGQS : :::. .:..::::::: : .: :::::::.::::::::::::.:::.:::::::::: CCDS18 LHGGLDSATSISASCSQRADSIKPGDSLPTSQAYCPPTYSTTGYSVDPVAGYQYGQYGQS 410 420 430 440 450 460 480 490 500 pF1KB5 AFHYLKPDIAWFQILLNTFDKSSGEEEDLEQ CCDS18 ECLVPWASPVPIPSPTPRASCLFMESYKVVSGWGMSISQMEKLKSSQMEQFT 470 480 490 500 510 520 >>CCDS2451.1 PAX3 gene_id:5077|Hs108|chr2 (206 aa) initn: 1321 init1: 1321 opt: 1321 Z-score: 834.5 bits: 162.7 E(32554): 3.7e-40 Smith-Waterman score: 1321; 99.0% identity (100.0% similar) in 198 aa overlap (1-198:1-198) 10 20 30 40 50 60 pF1KB5 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 MTTLAGAVPRMMRPGPGQNYPRSGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB5 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQVTTPDVEKKIEE 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB5 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS24 YKRENPGMFSWEIRDKLLKDAVCDRNTVPSVSSISRILRSKFGKGEEEEADLERKEAEES 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB5 EKKAKHSIDGILSERASAPQSDEGSDIDSEPDLPLKRKQRRSRTTFTAEQLEELERAFER :::::::::::::::..: CCDS24 EKKAKHSIDGILSERGKALVSGVSSH 190 200 505 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 04:38:27 2016 done: Sun Nov 6 04:38:28 2016 Total Scan time: 3.810 Total Display time: 0.090 Function used was FASTA [36.3.4 Apr, 2011]