FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE9416, 540 aa 1>>>pF1KE9416 540 - 540 aa - 540 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5535+/-0.00102; mu= 18.0573+/- 0.061 mean_var=92.9111+/-21.205, 0's: 0 Z-trim(105.7): 73 B-trim: 549 in 1/49 Lambda= 0.133058 statistics sampled from 8496 (8549) to 8496 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.623), E-opt: 0.2 (0.263), width: 16 Scan time: 3.310 The best scores are: opt bits E(32554) CCDS1849.1 GPR75 gene_id:10936|Hs108|chr2 ( 540) 3582 698.3 5.7e-201 >>CCDS1849.1 GPR75 gene_id:10936|Hs108|chr2 (540 aa) initn: 3582 init1: 3582 opt: 3582 Z-score: 3721.6 bits: 698.3 E(32554): 5.7e-201 Smith-Waterman score: 3582; 100.0% identity (100.0% similar) in 540 aa overlap (1-540:1-540) 10 20 30 40 50 60 pF1KE9 MNSTGHLQDAPNATSLHVPHSQEGNSTSLQEGLQDLIHTATLVTCTFLLAVIFCLGSYGN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 MNSTGHLQDAPNATSLHVPHSQEGNSTSLQEGLQDLIHTATLVTCTFLLAVIFCLGSYGN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE9 FIVFLSFFDPAFRKFRTNFDFMILNLSFCDLFICGVTAPMFTFVLFFSSASSIPDAFCFT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 FIVFLSFFDPAFRKFRTNFDFMILNLSFCDLFICGVTAPMFTFVLFFSSASSIPDAFCFT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE9 FHLTSSGFIIMSLKTVAVIALHRLRMVLGKQPNRTASFPCTVLLTLLLWATSFTLATLAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 FHLTSSGFIIMSLKTVAVIALHRLRMVLGKQPNRTASFPCTVLLTLLLWATSFTLATLAT 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE9 LKTSKSHLCLPMSSLIAGKGKAILSLYVVDFTFCVAVVSVSYIMIAQTLRKNAQVRKCPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 LKTSKSHLCLPMSSLIAGKGKAILSLYVVDFTFCVAVVSVSYIMIAQTLRKNAQVRKCPP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE9 VITVDASRPQPFMGVPVQGGGDPIQCAMPALYRNQNYNKLQHVQTRGYTKSPNQLVTPAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 VITVDASRPQPFMGVPVQGGGDPIQCAMPALYRNQNYNKLQHVQTRGYTKSPNQLVTPAA 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE9 SRLQLVSAINLSTAKDSKAVVTCVIIVLSVLVCCLPLGISLVQVVLSSNGSFILYQFELF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 SRLQLVSAINLSTAKDSKAVVTCVIIVLSVLVCCLPLGISLVQVVLSSNGSFILYQFELF 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE9 GFTLIFFKSGLNPFIYSRNSAGLRRKVLWCLQYIGLGFFCCKQKTRLRAMGKGNLEVNRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 GFTLIFFKSGLNPFIYSRNSAGLRRKVLWCLQYIGLGFFCCKQKTRLRAMGKGNLEVNRN 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE9 KSSHHETNSAYMLSPKPQKKFVDQACGPSHSKESMVSPKISAGHQHCGQSSSTPINTRIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 KSSHHETNSAYMLSPKPQKKFVDQACGPSHSKESMVSPKISAGHQHCGQSSSTPINTRIE 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE9 PYYSIYNSSPSQEESSPCNLQPVNSFGFANSYIAMHYHTTNDLVQEYDSTSAKQIPVPSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS18 PYYSIYNSSPSQEESSPCNLQPVNSFGFANSYIAMHYHTTNDLVQEYDSTSAKQIPVPSV 490 500 510 520 530 540 540 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 18:28:51 2016 done: Sun Nov 6 18:28:52 2016 Total Scan time: 3.310 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]