FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6605, 271 aa 1>>>pF1KE6605 271 - 271 aa - 271 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 6.2487+/-0.000373; mu= 12.6555+/- 0.024 mean_var=148.7796+/-30.587, 0's: 0 Z-trim(119.1): 483 B-trim: 1272 in 1/53 Lambda= 0.105148 statistics sampled from 32240 (32792) to 32240 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.738), E-opt: 0.2 (0.384), width: 16 Scan time: 4.810 The best scores are: opt bits E(85289) NP_076932 (OMIM: 265050,612502) collectin-11 isofo ( 271) 1862 293.6 2.6e-79 NP_001242914 (OMIM: 265050,612502) collectin-11 is ( 285) 1862 293.6 2.7e-79 NP_001242915 (OMIM: 265050,612502) collectin-11 is ( 245) 1590 252.3 6.4e-67 NP_001242916 (OMIM: 265050,612502) collectin-11 is ( 221) 1416 225.8 5.3e-59 NP_001242911 (OMIM: 265050,612502) collectin-11 is ( 247) 1416 225.9 5.7e-59 XP_005263910 (OMIM: 265050,612502) PREDICTED: coll ( 261) 1416 225.9 5.9e-59 NP_954705 (OMIM: 265050,612502) collectin-11 isofo ( 268) 1414 225.6 7.4e-59 NP_001242917 (OMIM: 265050,612502) collectin-11 is ( 221) 1355 216.6 3.2e-56 NP_001242912 (OMIM: 265050,612502) collectin-11 is ( 247) 1355 216.6 3.5e-56 XP_006711960 (OMIM: 265050,612502) PREDICTED: coll ( 261) 1355 216.7 3.6e-56 NP_001242913 (OMIM: 265050,612502) collectin-11 is ( 223) 1249 200.5 2.2e-51 NP_001242918 (OMIM: 265050,612502) collectin-11 is ( 197) 1239 198.9 5.9e-51 NP_006429 (OMIM: 607620) collectin-10 isoform 1 pr ( 277) 938 153.4 4.1e-37 NP_001311024 (OMIM: 607620) collectin-10 isoform 2 ( 208) 827 136.5 4e-32 XP_005250813 (OMIM: 607620) PREDICTED: collectin-1 ( 208) 827 136.5 4e-32 XP_006717924 (OMIM: 154545,614372) PREDICTED: mann ( 248) 385 69.5 6.8e-12 NP_000233 (OMIM: 154545,614372) mannose-binding pr ( 248) 385 69.5 6.8e-12 XP_011538118 (OMIM: 154545,614372) PREDICTED: mann ( 248) 385 69.5 6.8e-12 NP_001158118 (OMIM: 178500,178630) pulmonary surfa ( 199) 308 57.7 1.9e-08 NP_001158117 (OMIM: 178500,178630) pulmonary surfa ( 214) 308 57.8 2e-08 XP_006714997 (OMIM: 610043) PREDICTED: collagen al ( 557) 298 56.7 1.1e-07 XP_011532992 (OMIM: 610043) PREDICTED: collagen al ( 548) 297 56.5 1.2e-07 XP_016855830 (OMIM: 120326) PREDICTED: collagen al (1028) 286 55.2 5.8e-07 XP_016855829 (OMIM: 120326) PREDICTED: collagen al (1077) 286 55.2 6e-07 XP_011539030 (OMIM: 120326) PREDICTED: collagen al (1089) 286 55.2 6e-07 XP_011539029 (OMIM: 120326) PREDICTED: collagen al (1302) 286 55.3 6.7e-07 XP_011524043 (OMIM: 607621) PREDICTED: collectin-1 ( 725) 282 54.4 7e-07 XP_011539028 (OMIM: 120326) PREDICTED: collagen al (1402) 286 55.3 7.1e-07 XP_011539026 (OMIM: 120326) PREDICTED: collagen al (1563) 286 55.4 7.6e-07 XP_011539025 (OMIM: 120326) PREDICTED: collagen al (1573) 286 55.4 7.6e-07 XP_005270538 (OMIM: 120326) PREDICTED: collagen al (1588) 286 55.4 7.7e-07 XP_011539024 (OMIM: 120326) PREDICTED: collagen al (1589) 286 55.4 7.7e-07 XP_016855828 (OMIM: 120326) PREDICTED: collagen al (1592) 286 55.4 7.7e-07 XP_016855827 (OMIM: 120326) PREDICTED: collagen al (1593) 286 55.4 7.7e-07 NP_001847 (OMIM: 120326) collagen alpha-1(XVI) cha (1604) 286 55.4 7.7e-07 NP_569057 (OMIM: 607621) collectin-12 [Homo sapien ( 742) 281 54.3 7.9e-07 XP_016865507 (OMIM: 610043) PREDICTED: collagen al ( 305) 275 52.9 8.3e-07 XP_011532994 (OMIM: 610043) PREDICTED: collagen al ( 472) 275 53.1 1.1e-06 XP_005257115 (OMIM: 114000,120150,130000,130060,16 (1374) 281 54.6 1.2e-06 NP_775736 (OMIM: 610043) collagen alpha-1(XXIII) c ( 540) 275 53.2 1.2e-06 XP_006714999 (OMIM: 610043) PREDICTED: collagen al ( 545) 275 53.2 1.2e-06 XP_011532991 (OMIM: 610043) PREDICTED: collagen al ( 548) 275 53.2 1.2e-06 XP_011532990 (OMIM: 610043) PREDICTED: collagen al ( 557) 275 53.2 1.2e-06 XP_006714996 (OMIM: 610043) PREDICTED: collagen al ( 566) 275 53.2 1.2e-06 NP_536800 (OMIM: 603033,603034) acetylcholinestera ( 421) 273 52.8 1.3e-06 NP_536799 (OMIM: 603033,603034) acetylcholinestera ( 445) 273 52.8 1.3e-06 NP_005668 (OMIM: 603033,603034) acetylcholinestera ( 455) 273 52.8 1.3e-06 NP_001243003 (OMIM: 610004,616219) collagen alpha- ( 645) 275 53.3 1.4e-06 XP_011532993 (OMIM: 610043) PREDICTED: collagen al ( 530) 273 52.9 1.5e-06 XP_011530660 (OMIM: 610004,616219) PREDICTED: coll ( 535) 273 52.9 1.5e-06 >>NP_076932 (OMIM: 265050,612502) collectin-11 isoform a (271 aa) initn: 1862 init1: 1862 opt: 1862 Z-score: 1544.9 bits: 293.6 E(85289): 2.6e-79 Smith-Waterman score: 1862; 100.0% identity (100.0% similar) in 271 aa overlap (1-271:1-271) 10 20 30 40 50 60 pF1KE6 MRGNLALVGVLISLAFLSLLPSGHPQPAGDDACSVQILVPGLKGDAGEKGDKGAPGRPGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_076 MRGNLALVGVLISLAFLSLLPSGHPQPAGDDACSVQILVPGLKGDAGEKGDKGAPGRPGR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 VGPTGEKGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCECSQLRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_076 VGPTGEKGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCECSQLRK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE6 AIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_076 AIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMP 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE6 KDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAYDEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_076 KDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAYDEE 190 200 210 220 230 240 250 260 270 pF1KE6 DCVEMVASGGWNDVACHTTMYFMCEFDKENM ::::::::::::::::::::::::::::::: NP_076 DCVEMVASGGWNDVACHTTMYFMCEFDKENM 250 260 270 >>NP_001242914 (OMIM: 265050,612502) collectin-11 isofor (285 aa) initn: 1862 init1: 1862 opt: 1862 Z-score: 1544.7 bits: 293.6 E(85289): 2.7e-79 Smith-Waterman score: 1862; 100.0% identity (100.0% similar) in 271 aa overlap (1-271:15-285) 10 20 30 40 pF1KE6 MRGNLALVGVLISLAFLSLLPSGHPQPAGDDACSVQILVPGLKGDA :::::::::::::::::::::::::::::::::::::::::::::: NP_001 MKKQRGVGVLPALRMRGNLALVGVLISLAFLSLLPSGHPQPAGDDACSVQILVPGLKGDA 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE6 GEKGDKGAPGRPGRVGPTGEKGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GEKGDKGAPGRPGRVGPTGEKGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPN 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE6 GEPGLPCECSQLRKAIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GEPGLPCECSQLRKAIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADA 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE6 QLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFN 190 200 210 220 230 240 230 240 250 260 270 pF1KE6 KWRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCEFDKENM ::::::::::::::::::::::::::::::::::::::::::::: NP_001 KWRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCEFDKENM 250 260 270 280 >>NP_001242915 (OMIM: 265050,612502) collectin-11 isofor (245 aa) initn: 1583 init1: 1583 opt: 1590 Z-score: 1322.4 bits: 252.3 E(85289): 6.4e-67 Smith-Waterman score: 1590; 94.3% identity (95.1% similar) in 247 aa overlap (25-271:6-245) 10 20 30 40 50 60 pF1KE6 MRGNLALVGVLISLAFLSLLPSGHPQPAGDDACSVQILVPGLKGDAGEKGDKGAPGRPGR :.: : :. : ::::::::::::::::: NP_001 MWWVPPSPYGCLPCA-------LPGDAGEKGDKGAPGRPGR 10 20 30 70 80 90 100 110 120 pF1KE6 VGPTGEKGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCECSQLRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VGPTGEKGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCECSQLRK 40 50 60 70 80 90 130 140 150 160 170 180 pF1KE6 AIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMP 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE6 KDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAYDEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAYDEE 160 170 180 190 200 210 250 260 270 pF1KE6 DCVEMVASGGWNDVACHTTMYFMCEFDKENM ::::::::::::::::::::::::::::::: NP_001 DCVEMVASGGWNDVACHTTMYFMCEFDKENM 220 230 240 >>NP_001242916 (OMIM: 265050,612502) collectin-11 isofor (221 aa) initn: 1405 init1: 1405 opt: 1416 Z-score: 1180.3 bits: 225.8 E(85289): 5.3e-59 Smith-Waterman score: 1416; 95.4% identity (95.9% similar) in 217 aa overlap (55-271:5-221) 30 40 50 60 70 80 pF1KE6 PQPAGDDACSVQILVPGLKGDAGEKGDKGAPGRPGRVGPTGEKGDMGDKGQKGSVGRHGK : : : . ::::::::::::::::: NP_001 MWWVPPSPYGCLPCALPGDMGDKGQKGSVGRHGK 10 20 30 90 100 110 120 130 140 pF1KE6 IGPIGSKGEKGDSGDIGPPGPNGEPGLPCECSQLRKAIGEMDNQVSQLTSELKFIKNAVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 IGPIGSKGEKGDSGDIGPPGPNGEPGLPCECSQLRKAIGEMDNQVSQLTSELKFIKNAVA 40 50 60 70 80 90 150 160 170 180 190 200 pF1KE6 GVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIG 100 110 120 130 140 150 210 220 230 240 250 260 pF1KE6 INDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 INDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMC 160 170 180 190 200 210 270 pF1KE6 EFDKENM ::::::: NP_001 EFDKENM 220 >>NP_001242911 (OMIM: 265050,612502) collectin-11 isofor (247 aa) initn: 1416 init1: 1416 opt: 1416 Z-score: 1179.7 bits: 225.9 E(85289): 5.7e-59 Smith-Waterman score: 1630; 91.1% identity (91.1% similar) in 271 aa overlap (1-271:1-247) 10 20 30 40 50 60 pF1KE6 MRGNLALVGVLISLAFLSLLPSGHPQPAGDDACSVQILVPGLKGDAGEKGDKGAPGRPGR ::::::::::::::::::::::::::::::::::::::::::: NP_001 MRGNLALVGVLISLAFLSLLPSGHPQPAGDDACSVQILVPGLK----------------- 10 20 30 40 70 80 90 100 110 120 pF1KE6 VGPTGEKGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCECSQLRK ::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 -------GDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCECSQLRK 50 60 70 80 90 130 140 150 160 170 180 pF1KE6 AIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMP 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE6 KDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAYDEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAYDEE 160 170 180 190 200 210 250 260 270 pF1KE6 DCVEMVASGGWNDVACHTTMYFMCEFDKENM ::::::::::::::::::::::::::::::: NP_001 DCVEMVASGGWNDVACHTTMYFMCEFDKENM 220 230 240 >>XP_005263910 (OMIM: 265050,612502) PREDICTED: collecti (261 aa) initn: 1416 init1: 1416 opt: 1416 Z-score: 1179.5 bits: 225.9 E(85289): 5.9e-59 Smith-Waterman score: 1630; 91.1% identity (91.1% similar) in 271 aa overlap (1-271:15-261) 10 20 30 40 pF1KE6 MRGNLALVGVLISLAFLSLLPSGHPQPAGDDACSVQILVPGLKGDA ::::::::::::::::::::::::::::::::::::::::::: XP_005 MKKQRGVGVLPALRMRGNLALVGVLISLAFLSLLPSGHPQPAGDDACSVQILVPGLK--- 10 20 30 40 50 50 60 70 80 90 100 pF1KE6 GEKGDKGAPGRPGRVGPTGEKGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPN ::::::::::::::::::::::::::::::::::::::: XP_005 ---------------------GDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPN 60 70 80 90 110 120 130 140 150 160 pF1KE6 GEPGLPCECSQLRKAIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 GEPGLPCECSQLRKAIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADA 100 110 120 130 140 150 170 180 190 200 210 220 pF1KE6 QLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFN 160 170 180 190 200 210 230 240 250 260 270 pF1KE6 KWRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCEFDKENM ::::::::::::::::::::::::::::::::::::::::::::: XP_005 KWRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCEFDKENM 220 230 240 250 260 >>NP_954705 (OMIM: 265050,612502) collectin-11 isoform b (268 aa) initn: 1414 init1: 1414 opt: 1414 Z-score: 1177.7 bits: 225.6 E(85289): 7.4e-59 Smith-Waterman score: 1414; 99.0% identity (99.5% similar) in 207 aa overlap (65-271:62-268) 40 50 60 70 80 90 pF1KE6 VQILVPGLKGDAGEKGDKGAPGRPGRVGPTGEKGDMGDKGQKGSVGRHGKIGPIGSKGEK : .::::::::::::::::::::::::::: NP_954 SAPREKKQSQPVVTASDISKRKCTSSFVEMGSQGDMGDKGQKGSVGRHGKIGPIGSKGEK 40 50 60 70 80 90 100 110 120 130 140 150 pF1KE6 GDSGDIGPPGPNGEPGLPCECSQLRKAIGEMDNQVSQLTSELKFIKNAVAGVRETESKIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_954 GDSGDIGPPGPNGEPGLPCECSQLRKAIGEMDNQVSQLTSELKFIKNAVAGVRETESKIY 100 110 120 130 140 150 160 170 180 190 200 210 pF1KE6 LLVKEEKRYADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_954 LLVKEEKRYADAQLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAF 160 170 180 190 200 210 220 230 240 250 260 270 pF1KE6 VYSDHSPMRTFNKWRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCEFDKENM ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_954 VYSDHSPMRTFNKWRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCEFDKENM 220 230 240 250 260 >>NP_001242917 (OMIM: 265050,612502) collectin-11 isofor (221 aa) initn: 1344 init1: 1344 opt: 1355 Z-score: 1130.3 bits: 216.6 E(85289): 3.2e-56 Smith-Waterman score: 1362; 84.6% identity (85.4% similar) in 247 aa overlap (25-271:6-221) 10 20 30 40 50 60 pF1KE6 MRGNLALVGVLISLAFLSLLPSGHPQPAGDDACSVQILVPGLKGDAGEKGDKGAPGRPGR :.: : :. : ::::::::::::::::: NP_001 MWWVPPSPYGCLPCA-------LPGDAGEKGDKGAPGRPGR 10 20 30 70 80 90 100 110 120 pF1KE6 VGPTGEKGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCECSQLRK :::::::: :::::::::::::::::::::::::::: NP_001 VGPTGEKG------------------------EKGDSGDIGPPGPNGEPGLPCECSQLRK 40 50 60 70 130 140 150 160 170 180 pF1KE6 AIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMP 80 90 100 110 120 130 190 200 210 220 230 240 pF1KE6 KDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAYDEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAYDEE 140 150 160 170 180 190 250 260 270 pF1KE6 DCVEMVASGGWNDVACHTTMYFMCEFDKENM ::::::::::::::::::::::::::::::: NP_001 DCVEMVASGGWNDVACHTTMYFMCEFDKENM 200 210 220 >>NP_001242912 (OMIM: 265050,612502) collectin-11 isofor (247 aa) initn: 1355 init1: 1355 opt: 1355 Z-score: 1129.7 bits: 216.6 E(85289): 3.5e-56 Smith-Waterman score: 1634; 91.1% identity (91.1% similar) in 271 aa overlap (1-271:1-247) 10 20 30 40 50 60 pF1KE6 MRGNLALVGVLISLAFLSLLPSGHPQPAGDDACSVQILVPGLKGDAGEKGDKGAPGRPGR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MRGNLALVGVLISLAFLSLLPSGHPQPAGDDACSVQILVPGLKGDAGEKGDKGAPGRPGR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 VGPTGEKGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPNGEPGLPCECSQLRK :::::::: :::::::::::::::::::::::::::: NP_001 VGPTGEKG------------------------EKGDSGDIGPPGPNGEPGLPCECSQLRK 70 80 90 130 140 150 160 170 180 pF1KE6 AIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 AIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADAQLSCQGRGGTLSMP 100 110 120 130 140 150 190 200 210 220 230 240 pF1KE6 KDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAYDEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFNKWRSGEPNNAYDEE 160 170 180 190 200 210 250 260 270 pF1KE6 DCVEMVASGGWNDVACHTTMYFMCEFDKENM ::::::::::::::::::::::::::::::: NP_001 DCVEMVASGGWNDVACHTTMYFMCEFDKENM 220 230 240 >>XP_006711960 (OMIM: 265050,612502) PREDICTED: collecti (261 aa) initn: 1355 init1: 1355 opt: 1355 Z-score: 1129.5 bits: 216.7 E(85289): 3.6e-56 Smith-Waterman score: 1634; 91.1% identity (91.1% similar) in 271 aa overlap (1-271:15-261) 10 20 30 40 pF1KE6 MRGNLALVGVLISLAFLSLLPSGHPQPAGDDACSVQILVPGLKGDA :::::::::::::::::::::::::::::::::::::::::::::: XP_006 MKKQRGVGVLPALRMRGNLALVGVLISLAFLSLLPSGHPQPAGDDACSVQILVPGLKGDA 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE6 GEKGDKGAPGRPGRVGPTGEKGDMGDKGQKGSVGRHGKIGPIGSKGEKGDSGDIGPPGPN :::::::::::::::::::::: :::::::::::::: XP_006 GEKGDKGAPGRPGRVGPTGEKG------------------------EKGDSGDIGPPGPN 70 80 90 110 120 130 140 150 160 pF1KE6 GEPGLPCECSQLRKAIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 GEPGLPCECSQLRKAIGEMDNQVSQLTSELKFIKNAVAGVRETESKIYLLVKEEKRYADA 100 110 120 130 140 150 170 180 190 200 210 220 pF1KE6 QLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 QLSCQGRGGTLSMPKDEAANGLMAAYLAQAGLARVFIGINDLEKEGAFVYSDHSPMRTFN 160 170 180 190 200 210 230 240 250 260 270 pF1KE6 KWRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCEFDKENM ::::::::::::::::::::::::::::::::::::::::::::: XP_006 KWRSGEPNNAYDEEDCVEMVASGGWNDVACHTTMYFMCEFDKENM 220 230 240 250 260 271 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:42:22 2016 done: Tue Nov 8 14:42:23 2016 Total Scan time: 4.810 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]