FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE1607, 114 aa 1>>>pF1KE1607 114 - 114 aa - 114 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9306+/-0.000822; mu= 11.2977+/- 0.049 mean_var=49.3874+/- 9.633, 0's: 0 Z-trim(104.5): 45 B-trim: 68 in 1/49 Lambda= 0.182501 statistics sampled from 7875 (7920) to 7875 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.638), E-opt: 0.2 (0.243), width: 16 Scan time: 1.480 The best scores are: opt bits E(32554) CCDS1273.1 XCL2 gene_id:6846|Hs108|chr1 ( 114) 717 196.2 3.7e-51 CCDS1274.1 XCL1 gene_id:6375|Hs108|chr1 ( 114) 702 192.2 5.7e-50 >>CCDS1273.1 XCL2 gene_id:6846|Hs108|chr1 (114 aa) initn: 717 init1: 717 opt: 717 Z-score: 1032.0 bits: 196.2 E(32554): 3.7e-51 Smith-Waterman score: 717; 100.0% identity (100.0% similar) in 114 aa overlap (1-114:1-114) 10 20 30 40 50 60 pF1KE1 MRLLILALLGICSLTAYIVEGVGSEVSHRRTCVSLTTQRLPVSRIKTYTITEGSLRAVIF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 MRLLILALLGICSLTAYIVEGVGSEVSHRRTCVSLTTQRLPVSRIKTYTITEGSLRAVIF 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 ITKRGLKVCADPQATWVRDVVRSMDRKSNTRNNMIQTKPTGTQQSTNTAVTLTG :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 ITKRGLKVCADPQATWVRDVVRSMDRKSNTRNNMIQTKPTGTQQSTNTAVTLTG 70 80 90 100 110 >>CCDS1274.1 XCL1 gene_id:6375|Hs108|chr1 (114 aa) initn: 702 init1: 702 opt: 702 Z-score: 1010.6 bits: 192.2 E(32554): 5.7e-50 Smith-Waterman score: 702; 98.2% identity (99.1% similar) in 114 aa overlap (1-114:1-114) 10 20 30 40 50 60 pF1KE1 MRLLILALLGICSLTAYIVEGVGSEVSHRRTCVSLTTQRLPVSRIKTYTITEGSLRAVIF ::::::::::::::::::::::::::: .::::::::::::::::::::::::::::::: CCDS12 MRLLILALLGICSLTAYIVEGVGSEVSDKRTCVSLTTQRLPVSRIKTYTITEGSLRAVIF 10 20 30 40 50 60 70 80 90 100 110 pF1KE1 ITKRGLKVCADPQATWVRDVVRSMDRKSNTRNNMIQTKPTGTQQSTNTAVTLTG :::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS12 ITKRGLKVCADPQATWVRDVVRSMDRKSNTRNNMIQTKPTGTQQSTNTAVTLTG 70 80 90 100 110 114 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 18:47:44 2016 done: Sun Nov 6 18:47:44 2016 Total Scan time: 1.480 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]