FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6188, 167 aa 1>>>pF1KE6188 167 - 167 aa - 167 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.2333+/-0.000401; mu= 12.1887+/- 0.024 mean_var=61.2035+/-12.456, 0's: 0 Z-trim(112.2): 16 B-trim: 75 in 1/49 Lambda= 0.163940 statistics sampled from 20985 (21000) to 20985 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.619), E-opt: 0.2 (0.246), width: 16 Scan time: 3.440 The best scores are: opt bits E(85289) NP_001116311 (OMIM: 613683) sugar transporter SWEE ( 167) 1131 275.9 2.1e-74 XP_006711516 (OMIM: 613683) PREDICTED: sugar trans ( 191) 624 156.0 2.9e-38 NP_061333 (OMIM: 613683) sugar transporter SWEET1 ( 221) 624 156.0 3.3e-38 NP_001274521 (OMIM: 613683) sugar transporter SWEE ( 103) 513 129.6 1.4e-30 NP_001274518 (OMIM: 613683) sugar transporter SWEE ( 112) 513 129.7 1.5e-30 NP_001274519 (OMIM: 613683) sugar transporter SWEE ( 156) 514 130.0 1.7e-30 NP_001116309 (OMIM: 613683) sugar transporter SWEE ( 166) 514 130.0 1.8e-30 NP_001274515 (OMIM: 613683) sugar transporter SWEE ( 175) 514 130.0 1.9e-30 NP_001274520 (OMIM: 613683) sugar transporter SWEE ( 183) 514 130.0 1.9e-30 XP_005245398 (OMIM: 613683) PREDICTED: sugar trans ( 189) 514 130.0 2e-30 XP_005245399 (OMIM: 613683) PREDICTED: sugar trans ( 189) 514 130.0 2e-30 XP_005245397 (OMIM: 613683) PREDICTED: sugar trans ( 204) 514 130.0 2.1e-30 XP_005245396 (OMIM: 613683) PREDICTED: sugar trans ( 205) 514 130.0 2.1e-30 NP_001274516 (OMIM: 613683) sugar transporter SWEE ( 214) 514 130.0 2.2e-30 NP_001274517 (OMIM: 613683) sugar transporter SWEE ( 136) 269 72.0 4.1e-13 >>NP_001116311 (OMIM: 613683) sugar transporter SWEET1 i (167 aa) initn: 1131 init1: 1131 opt: 1131 Z-score: 1456.8 bits: 275.9 E(85289): 2.1e-74 Smith-Waterman score: 1131; 100.0% identity (100.0% similar) in 167 aa overlap (1-167:1-167) 10 20 30 40 50 60 pF1KE6 MEAGGFLDSLIYGACVVFTLGMFSAGLSDLRHMRMTRSVDNVQFLPFLTTEVNNLGWLSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MEAGGFLDSLIYGACVVFTLGMFSAGLSDLRHMRMTRSVDNVQFLPFLTTEVNNLGWLSY 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 GALKGDGILIVVNTVGAALQTLYILAYLHYCPRKAKVIQTKSTQCLSYPLTIATLLTSAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 GALKGDGILIVVNTVGAALQTLYILAYLHYCPRKAKVIQTKSTQCLSYPLTIATLLTSAS 70 80 90 100 110 120 130 140 150 160 pF1KE6 WCLYGFRLRDPYIMVSNFPGIVTSFIRFWLFWKYPQEQDRNYWLLQT ::::::::::::::::::::::::::::::::::::::::::::::: NP_001 WCLYGFRLRDPYIMVSNFPGIVTSFIRFWLFWKYPQEQDRNYWLLQT 130 140 150 160 >>XP_006711516 (OMIM: 613683) PREDICTED: sugar transport (191 aa) initn: 635 init1: 620 opt: 624 Z-score: 807.8 bits: 156.0 E(85289): 2.9e-38 Smith-Waterman score: 768; 71.3% identity (71.3% similar) in 188 aa overlap (1-134:1-188) 10 20 30 40 50 60 pF1KE6 MEAGGFLDSLIYGACVVFTLGMFSAGLSDLRHMRMTRSVDNVQFLPFLTTEVNNLGWLSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MEAGGFLDSLIYGACVVFTLGMFSAGLSDLRHMRMTRSVDNVQFLPFLTTEVNNLGWLSY 10 20 30 40 50 60 70 80 90 pF1KE6 GALKGDGILIVVNTVGAALQTLYILAYLHYCPRK-------------------------- :::::::::::::::::::::::::::::::::: XP_006 GALKGDGILIVVNTVGAALQTLYILAYLHYCPRKRVVLLQTATLLGVLLLGYGYFWLLVP 70 80 90 100 110 120 100 110 120 pF1KE6 ----------------------------AKVIQTKSTQCLSYPLTIATLLTSASWCLYGF :::::::::::::::::::::::::::::::: XP_006 NPEARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLSYPLTIATLLTSASWCLYGF 130 140 150 160 170 180 130 140 150 160 pF1KE6 RLRDPYIMVSNFPGIVTSFIRFWLFWKYPQEQDRNYWLLQT :::::::: XP_006 RLRDPYIMQFL 190 >>NP_061333 (OMIM: 613683) sugar transporter SWEET1 isof (221 aa) initn: 635 init1: 620 opt: 624 Z-score: 806.9 bits: 156.0 E(85289): 3.3e-38 Smith-Waterman score: 839; 72.9% identity (72.9% similar) in 199 aa overlap (1-145:1-199) 10 20 30 40 50 60 pF1KE6 MEAGGFLDSLIYGACVVFTLGMFSAGLSDLRHMRMTRSVDNVQFLPFLTTEVNNLGWLSY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_061 MEAGGFLDSLIYGACVVFTLGMFSAGLSDLRHMRMTRSVDNVQFLPFLTTEVNNLGWLSY 10 20 30 40 50 60 70 80 90 pF1KE6 GALKGDGILIVVNTVGAALQTLYILAYLHYCPRK-------------------------- :::::::::::::::::::::::::::::::::: NP_061 GALKGDGILIVVNTVGAALQTLYILAYLHYCPRKRVVLLQTATLLGVLLLGYGYFWLLVP 70 80 90 100 110 120 100 110 120 pF1KE6 ----------------------------AKVIQTKSTQCLSYPLTIATLLTSASWCLYGF :::::::::::::::::::::::::::::::: NP_061 NPEARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLSYPLTIATLLTSASWCLYGF 130 140 150 160 170 180 130 140 150 160 pF1KE6 RLRDPYIMVSNFPGIVTSFIRFWLFWKYPQEQDRNYWLLQT ::::::::::::::::::: NP_061 RLRDPYIMVSNFPGIVTSFIRFWLFWKYPQEQDRNYWLLQT 190 200 210 220 >>NP_001274521 (OMIM: 613683) sugar transporter SWEET1 i (103 aa) initn: 513 init1: 513 opt: 513 Z-score: 670.1 bits: 129.6 E(85289): 1.4e-30 Smith-Waterman score: 513; 98.6% identity (100.0% similar) in 74 aa overlap (94-167:30-103) 70 80 90 100 110 120 pF1KE6 KGDGILIVVNTVGAALQTLYILAYLHYCPRKAKVIQTKSTQCLSYPLTIATLLTSASWCL .::::::::::::::::::::::::::::: NP_001 MIQGLGPQAHANDPECGQRPVPALSHHGSQAKVIQTKSTQCLSYPLTIATLLTSASWCL 10 20 30 40 50 130 140 150 160 pF1KE6 YGFRLRDPYIMVSNFPGIVTSFIRFWLFWKYPQEQDRNYWLLQT :::::::::::::::::::::::::::::::::::::::::::: NP_001 YGFRLRDPYIMVSNFPGIVTSFIRFWLFWKYPQEQDRNYWLLQT 60 70 80 90 100 >>NP_001274518 (OMIM: 613683) sugar transporter SWEET1 i (112 aa) initn: 513 init1: 513 opt: 513 Z-score: 669.5 bits: 129.7 E(85289): 1.5e-30 Smith-Waterman score: 513; 98.6% identity (100.0% similar) in 74 aa overlap (94-167:39-112) 70 80 90 100 110 120 pF1KE6 KGDGILIVVNTVGAALQTLYILAYLHYCPRKAKVIQTKSTQCLSYPLTIATLLTSASWCL .::::::::::::::::::::::::::::: NP_001 VLRRPLGPQAHANDPECGQRPVPALSHHGSQAKVIQTKSTQCLSYPLTIATLLTSASWCL 10 20 30 40 50 60 130 140 150 160 pF1KE6 YGFRLRDPYIMVSNFPGIVTSFIRFWLFWKYPQEQDRNYWLLQT :::::::::::::::::::::::::::::::::::::::::::: NP_001 YGFRLRDPYIMVSNFPGIVTSFIRFWLFWKYPQEQDRNYWLLQT 70 80 90 100 110 >>NP_001274519 (OMIM: 613683) sugar transporter SWEET1 i (156 aa) initn: 513 init1: 513 opt: 514 Z-score: 668.6 bits: 130.0 E(85289): 1.7e-30 Smith-Waterman score: 514; 82.8% identity (87.1% similar) in 93 aa overlap (75-167:64-156) 50 60 70 80 90 100 pF1KE6 LPFLTTEVNNLGWLSYGALKGDGILIVVNTVGAALQTLYILAYLHYCPRKAKVIQTKSTQ .: ... : :: :::::::::: NP_001 LQTATLLGVLLLGYGYFWLLVPNPEARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTQ 40 50 60 70 80 90 110 120 130 140 150 160 pF1KE6 CLSYPLTIATLLTSASWCLYGFRLRDPYIMVSNFPGIVTSFIRFWLFWKYPQEQDRNYWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 CLSYPLTIATLLTSASWCLYGFRLRDPYIMVSNFPGIVTSFIRFWLFWKYPQEQDRNYWL 100 110 120 130 140 150 pF1KE6 LQT ::: NP_001 LQT >>NP_001116309 (OMIM: 613683) sugar transporter SWEET1 i (166 aa) initn: 513 init1: 513 opt: 514 Z-score: 668.2 bits: 130.0 E(85289): 1.8e-30 Smith-Waterman score: 514; 82.8% identity (87.1% similar) in 93 aa overlap (75-167:74-166) 50 60 70 80 90 100 pF1KE6 LPFLTTEVNNLGWLSYGALKGDGILIVVNTVGAALQTLYILAYLHYCPRKAKVIQTKSTQ .: ... : :: :::::::::: NP_001 LQTATLLGVLLLGYGYFWLLVPNPEARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTQ 50 60 70 80 90 100 110 120 130 140 150 160 pF1KE6 CLSYPLTIATLLTSASWCLYGFRLRDPYIMVSNFPGIVTSFIRFWLFWKYPQEQDRNYWL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 CLSYPLTIATLLTSASWCLYGFRLRDPYIMVSNFPGIVTSFIRFWLFWKYPQEQDRNYWL 110 120 130 140 150 160 pF1KE6 LQT ::: NP_001 LQT >>NP_001274515 (OMIM: 613683) sugar transporter SWEET1 i (175 aa) initn: 513 init1: 513 opt: 514 Z-score: 667.8 bits: 130.0 E(85289): 1.9e-30 Smith-Waterman score: 666; 67.9% identity (67.9% similar) in 168 aa overlap (54-167:8-175) 30 40 50 60 70 80 pF1KE6 SAGLSDLRHMRMTRSVDNVQFLPFLTTEVNNLGWLSYGALKGDGILIVVNTVGAALQTLY :::::::::::::::::::::::::::::: NP_001 MRGLHPCNLGWLSYGALKGDGILIVVNTVGAALQTLY 10 20 30 90 pF1KE6 ILAYLHYCPRK------------------------------------------------- ::::::::::: NP_001 ILAYLHYCPRKRVVLLQTATLLGVLLLGYGYFWLLVPNPEARLQQLGLFCSVFTISMYLS 40 50 60 70 80 90 100 110 120 130 140 pF1KE6 -----AKVIQTKSTQCLSYPLTIATLLTSASWCLYGFRLRDPYIMVSNFPGIVTSFIRFW ::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PLADLAKVIQTKSTQCLSYPLTIATLLTSASWCLYGFRLRDPYIMVSNFPGIVTSFIRFW 100 110 120 130 140 150 150 160 pF1KE6 LFWKYPQEQDRNYWLLQT :::::::::::::::::: NP_001 LFWKYPQEQDRNYWLLQT 160 170 >>NP_001274520 (OMIM: 613683) sugar transporter SWEET1 i (183 aa) initn: 513 init1: 513 opt: 514 Z-score: 667.5 bits: 130.0 E(85289): 1.9e-30 Smith-Waterman score: 812; 73.8% identity (73.8% similar) in 183 aa overlap (33-167:1-183) 10 20 30 40 50 60 pF1KE6 AGGFLDSLIYGACVVFTLGMFSAGLSDLRHMRMTRSVDNVQFLPFLTTEVNNLGWLSYGA :::::::::::::::::::::::::::::: NP_001 MRMTRSVDNVQFLPFLTTEVNNLGWLSYGA 10 20 30 70 80 90 pF1KE6 LKGDGILIVVNTVGAALQTLYILAYLHYCPRK---------------------------- :::::::::::::::::::::::::::::::: NP_001 LKGDGILIVVNTVGAALQTLYILAYLHYCPRKTATLLGVLLLGYGYFWLLVPNPEARLQQ 40 50 60 70 80 90 100 110 120 130 pF1KE6 --------------------AKVIQTKSTQCLSYPLTIATLLTSASWCLYGFRLRDPYIM :::::::::::::::::::::::::::::::::::::::: NP_001 LGLFCSVFTISMYLSPLADLAKVIQTKSTQCLSYPLTIATLLTSASWCLYGFRLRDPYIM 100 110 120 130 140 150 140 150 160 pF1KE6 VSNFPGIVTSFIRFWLFWKYPQEQDRNYWLLQT ::::::::::::::::::::::::::::::::: NP_001 VSNFPGIVTSFIRFWLFWKYPQEQDRNYWLLQT 160 170 180 >>XP_005245398 (OMIM: 613683) PREDICTED: sugar transport (189 aa) initn: 513 init1: 513 opt: 514 Z-score: 667.3 bits: 130.0 E(85289): 2e-30 Smith-Waterman score: 800; 71.4% identity (71.4% similar) in 189 aa overlap (33-167:1-189) 10 20 30 40 50 60 pF1KE6 AGGFLDSLIYGACVVFTLGMFSAGLSDLRHMRMTRSVDNVQFLPFLTTEVNNLGWLSYGA :::::::::::::::::::::::::::::: XP_005 MRMTRSVDNVQFLPFLTTEVNNLGWLSYGA 10 20 30 70 80 90 pF1KE6 LKGDGILIVVNTVGAALQTLYILAYLHYCPRK---------------------------- :::::::::::::::::::::::::::::::: XP_005 LKGDGILIVVNTVGAALQTLYILAYLHYCPRKRVVLLQTATLLGVLLLGYGYFWLLVPNP 40 50 60 70 80 90 100 110 120 pF1KE6 --------------------------AKVIQTKSTQCLSYPLTIATLLTSASWCLYGFRL :::::::::::::::::::::::::::::::::: XP_005 EARLQQLGLFCSVFTISMYLSPLADLAKVIQTKSTQCLSYPLTIATLLTSASWCLYGFRL 100 110 120 130 140 150 130 140 150 160 pF1KE6 RDPYIMVSNFPGIVTSFIRFWLFWKYPQEQDRNYWLLQT ::::::::::::::::::::::::::::::::::::::: XP_005 RDPYIMVSNFPGIVTSFIRFWLFWKYPQEQDRNYWLLQT 160 170 180 167 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 10:11:24 2016 done: Tue Nov 8 10:11:25 2016 Total Scan time: 3.440 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]