FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2138, 129 aa 1>>>pF1KE2138 129 - 129 aa - 129 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.6259+/-0.000736; mu= 14.4231+/- 0.045 mean_var=56.7729+/-11.394, 0's: 0 Z-trim(108.9): 38 B-trim: 372 in 2/48 Lambda= 0.170217 statistics sampled from 10470 (10513) to 10470 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.704), E-opt: 0.2 (0.323), width: 16 Scan time: 1.500 The best scores are: opt bits E(32554) CCDS937.1 HIST2H2AC gene_id:8338|Hs108|chr1 ( 129) 813 207.1 2.5e-54 CCDS934.1 HIST2H2AA3 gene_id:8337|Hs108|chr1 ( 130) 796 202.9 4.5e-53 CCDS30849.1 HIST2H2AA4 gene_id:723790|Hs108|chr1 ( 130) 796 202.9 4.5e-53 CCDS31752.1 H2AFJ gene_id:55766|Hs108|chr12 ( 129) 790 201.4 1.3e-52 CCDS4626.1 HIST1H2AI gene_id:8329|Hs108|chr6 ( 130) 789 201.2 1.5e-52 CCDS4639.1 HIST1H2AM gene_id:8336|Hs108|chr6 ( 130) 789 201.2 1.5e-52 CCDS4632.1 HIST1H2AK gene_id:8330|Hs108|chr6 ( 130) 789 201.2 1.5e-52 CCDS4585.1 HIST1H2AC gene_id:8334|Hs108|chr6 ( 130) 789 201.2 1.5e-52 CCDS4634.1 HIST1H2AL gene_id:8332|Hs108|chr6 ( 130) 789 201.2 1.5e-52 CCDS4619.1 HIST1H2AG gene_id:8969|Hs108|chr6 ( 130) 789 201.2 1.5e-52 CCDS1573.1 HIST3H2A gene_id:92815|Hs108|chr1 ( 130) 785 200.2 3e-52 CCDS4591.1 HIST1H2AD gene_id:3013|Hs108|chr6 ( 130) 785 200.2 3e-52 CCDS4622.1 HIST1H2AH gene_id:85235|Hs108|chr6 ( 128) 783 199.7 4.1e-52 CCDS4574.1 HIST1H2AB gene_id:8335|Hs108|chr6 ( 130) 782 199.5 4.9e-52 CCDS4595.1 HIST1H2AE gene_id:3012|Hs108|chr6 ( 130) 782 199.5 4.9e-52 CCDS4628.1 HIST1H2AJ gene_id:8331|Hs108|chr6 ( 128) 780 199.0 6.8e-52 CCDS938.1 HIST2H2AB gene_id:317772|Hs108|chr1 ( 130) 779 198.7 8.2e-52 CCDS4562.1 HIST1H2AA gene_id:221613|Hs108|chr6 ( 131) 773 197.3 2.3e-51 CCDS8410.1 H2AFX gene_id:3014|Hs108|chr11 ( 143) 738 188.7 9.5e-49 CCDS4184.1 H2AFY gene_id:9555|Hs108|chr5 ( 369) 496 129.5 1.6e-30 CCDS4183.1 H2AFY gene_id:9555|Hs108|chr5 ( 371) 496 129.6 1.6e-30 CCDS4185.1 H2AFY gene_id:9555|Hs108|chr5 ( 372) 496 129.6 1.6e-30 CCDS7296.1 H2AFY2 gene_id:55506|Hs108|chr10 ( 372) 490 128.1 4.3e-30 CCDS5496.1 H2AFV gene_id:94239|Hs108|chr7 ( 128) 463 121.1 1.9e-28 CCDS3654.1 H2AFZ gene_id:3015|Hs108|chr4 ( 128) 455 119.2 7.3e-28 CCDS5495.1 H2AFV gene_id:94239|Hs108|chr7 ( 114) 413 108.8 8.4e-25 CCDS5497.1 H2AFV gene_id:94239|Hs108|chr7 ( 102) 365 97.0 2.7e-21 CCDS35464.1 H2AFB3 gene_id:83740|Hs108|chrX ( 115) 300 81.1 1.9e-16 CCDS35461.1 H2AFB2 gene_id:474381|Hs108|chrX ( 115) 300 81.1 1.9e-16 CCDS35458.1 H2AFB1 gene_id:474382|Hs108|chrX ( 115) 291 78.8 8.9e-16 CCDS47581.1 H2AFV gene_id:94239|Hs108|chr7 ( 66) 241 66.4 2.8e-12 CCDS5498.1 H2AFV gene_id:94239|Hs108|chr7 ( 90) 228 63.3 3.3e-11 >>CCDS937.1 HIST2H2AC gene_id:8338|Hs108|chr1 (129 aa) initn: 813 init1: 813 opt: 813 Z-score: 1088.8 bits: 207.1 E(32554): 2.5e-54 Smith-Waterman score: 813; 100.0% identity (100.0% similar) in 129 aa overlap (1-129:1-129) 10 20 30 40 50 60 pF1KE2 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS93 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS93 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 70 80 90 100 110 120 pF1KE2 TESHKAKSK ::::::::: CCDS93 TESHKAKSK >>CCDS934.1 HIST2H2AA3 gene_id:8337|Hs108|chr1 (130 aa) initn: 804 init1: 785 opt: 796 Z-score: 1066.2 bits: 202.9 E(32554): 4.5e-53 Smith-Waterman score: 796; 98.5% identity (99.2% similar) in 130 aa overlap (1-129:1-130) 10 20 30 40 50 60 pF1KE2 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS93 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS93 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 70 80 90 100 110 120 pF1KE2 TESH-KAKSK :::: :::.: CCDS93 TESHHKAKGK 130 >>CCDS30849.1 HIST2H2AA4 gene_id:723790|Hs108|chr1 (130 aa) initn: 804 init1: 785 opt: 796 Z-score: 1066.2 bits: 202.9 E(32554): 4.5e-53 Smith-Waterman score: 796; 98.5% identity (99.2% similar) in 130 aa overlap (1-129:1-130) 10 20 30 40 50 60 pF1KE2 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS30 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 70 80 90 100 110 120 pF1KE2 TESH-KAKSK :::: :::.: CCDS30 TESHHKAKGK 130 >>CCDS31752.1 H2AFJ gene_id:55766|Hs108|chr12 (129 aa) initn: 790 init1: 790 opt: 790 Z-score: 1058.3 bits: 201.4 E(32554): 1.3e-52 Smith-Waterman score: 790; 96.9% identity (100.0% similar) in 129 aa overlap (1-129:1-129) 10 20 30 40 50 60 pF1KE2 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT ::::::::::.::::::::::::::::::::::::::::::::::::::::.:::::::: CCDS31 MSGRGKQGGKVRAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS31 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 70 80 90 100 110 120 pF1KE2 TESHKAKSK :::.:.::: CCDS31 TESQKTKSK >>CCDS4626.1 HIST1H2AI gene_id:8329|Hs108|chr6 (130 aa) initn: 797 init1: 778 opt: 789 Z-score: 1056.9 bits: 201.2 E(32554): 1.5e-52 Smith-Waterman score: 789; 96.9% identity (99.2% similar) in 130 aa overlap (1-129:1-130) 10 20 30 40 50 60 pF1KE2 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT ::::::::::::::::.::::::::::::::::::::::::::::::::::.:::::::: CCDS46 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 70 80 90 100 110 120 pF1KE2 TESH-KAKSK :::: :::.: CCDS46 TESHHKAKGK 130 >>CCDS4639.1 HIST1H2AM gene_id:8336|Hs108|chr6 (130 aa) initn: 797 init1: 778 opt: 789 Z-score: 1056.9 bits: 201.2 E(32554): 1.5e-52 Smith-Waterman score: 789; 96.9% identity (99.2% similar) in 130 aa overlap (1-129:1-130) 10 20 30 40 50 60 pF1KE2 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT ::::::::::::::::.::::::::::::::::::::::::::::::::::.:::::::: CCDS46 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 70 80 90 100 110 120 pF1KE2 TESH-KAKSK :::: :::.: CCDS46 TESHHKAKGK 130 >>CCDS4632.1 HIST1H2AK gene_id:8330|Hs108|chr6 (130 aa) initn: 797 init1: 778 opt: 789 Z-score: 1056.9 bits: 201.2 E(32554): 1.5e-52 Smith-Waterman score: 789; 96.9% identity (99.2% similar) in 130 aa overlap (1-129:1-130) 10 20 30 40 50 60 pF1KE2 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT ::::::::::::::::.::::::::::::::::::::::::::::::::::.:::::::: CCDS46 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 70 80 90 100 110 120 pF1KE2 TESH-KAKSK :::: :::.: CCDS46 TESHHKAKGK 130 >>CCDS4585.1 HIST1H2AC gene_id:8334|Hs108|chr6 (130 aa) initn: 797 init1: 778 opt: 789 Z-score: 1056.9 bits: 201.2 E(32554): 1.5e-52 Smith-Waterman score: 789; 96.9% identity (99.2% similar) in 130 aa overlap (1-129:1-130) 10 20 30 40 50 60 pF1KE2 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT :::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::: CCDS45 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: CCDS45 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 70 80 90 100 110 120 pF1KE2 TESH-KAKSK :::: :::.: CCDS45 TESHHKAKGK 130 >>CCDS4634.1 HIST1H2AL gene_id:8332|Hs108|chr6 (130 aa) initn: 797 init1: 778 opt: 789 Z-score: 1056.9 bits: 201.2 E(32554): 1.5e-52 Smith-Waterman score: 789; 96.9% identity (99.2% similar) in 130 aa overlap (1-129:1-130) 10 20 30 40 50 60 pF1KE2 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT ::::::::::::::::.::::::::::::::::::::::::::::::::::.:::::::: CCDS46 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 70 80 90 100 110 120 pF1KE2 TESH-KAKSK :::: :::.: CCDS46 TESHHKAKGK 130 >>CCDS4619.1 HIST1H2AG gene_id:8969|Hs108|chr6 (130 aa) initn: 797 init1: 778 opt: 789 Z-score: 1056.9 bits: 201.2 E(32554): 1.5e-52 Smith-Waterman score: 789; 96.9% identity (99.2% similar) in 130 aa overlap (1-129:1-130) 10 20 30 40 50 60 pF1KE2 MSGRGKQGGKARAKAKSRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLT ::::::::::::::::.::::::::::::::::::::::::::::::::::.:::::::: CCDS46 MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLT 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 70 80 90 100 110 120 pF1KE2 TESH-KAKSK :::: :::.: CCDS46 TESHHKAKGK 130 129 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Sun Nov 6 18:55:54 2016 done: Sun Nov 6 18:55:54 2016 Total Scan time: 1.500 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]