FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5664, 524 aa 1>>>pF1KE5664 524 - 524 aa - 524 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.9819+/-0.000404; mu= 20.0843+/- 0.025 mean_var=67.2782+/-13.236, 0's: 0 Z-trim(111.4): 27 B-trim: 7 in 1/54 Lambda= 0.156364 statistics sampled from 20043 (20052) to 20043 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.601), E-opt: 0.2 (0.235), width: 16 Scan time: 9.130 The best scores are: opt bits E(85289) NP_660286 (OMIM: 617081) metalloendopeptidase OMA1 ( 524) 3550 810.2 0 >>NP_660286 (OMIM: 617081) metalloendopeptidase OMA1, mi (524 aa) initn: 3550 init1: 3550 opt: 3550 Z-score: 4326.8 bits: 810.2 E(85289): 0 Smith-Waterman score: 3550; 100.0% identity (100.0% similar) in 524 aa overlap (1-524:1-524) 10 20 30 40 50 60 pF1KE5 MSFICGLQSAARNHVFFRFNSLSNWRKCNTLASTSRGCHQVQVNHIVNKYQGLGVNQCDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_660 MSFICGLQSAARNHVFFRFNSLSNWRKCNTLASTSRGCHQVQVNHIVNKYQGLGVNQCDR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 WSFLPGNFHFYSTFNNKRTGGLSSTKSKEIWRITSKCTVWNDAFSRQLLIKEVTAVPSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_660 WSFLPGNFHFYSTFNNKRTGGLSSTKSKEIWRITSKCTVWNDAFSRQLLIKEVTAVPSLS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 VLHPLSPASIRAIRNFHTSPRFQAAPVPLLLMILKPVQKLFAIIVGRGIRKWWQALPPNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_660 VLHPLSPASIRAIRNFHTSPRFQAAPVPLLLMILKPVQKLFAIIVGRGIRKWWQALPPNK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 KEVVKENIRKNKWKLFLGLSSFGLLFVVFYFTHLEVSPITGRSKLLLLGKEQFRLLSELE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_660 KEVVKENIRKNKWKLFLGLSSFGLLFVVFYFTHLEVSPITGRSKLLLLGKEQFRLLSELE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 YEAWMEEFKNDMLTEKDARYLAVKEVLCHLIECNKDVPGISQINWVIHVVDSPIINAFVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_660 YEAWMEEFKNDMLTEKDARYLAVKEVLCHLIECNKDVPGISQINWVIHVVDSPIINAFVL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 PNGQMFVFTGFLNSVTDIHQLSFLLGHEIAHAVLGHAAEKAGMVHLLDFLGMIFLTMIWA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_660 PNGQMFVFTGFLNSVTDIHQLSFLLGHEIAHAVLGHAAEKAGMVHLLDFLGMIFLTMIWA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 ICPRDSLALLCQWIQSKLQEYMFNRPYSRKLEAEADKIGLLLAAKACADIRASSVFWQQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_660 ICPRDSLALLCQWIQSKLQEYMFNRPYSRKLEAEADKIGLLLAAKACADIRASSVFWQQM 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 EFVDSLHGQPKMPEWLSTHPSHGNRVEYLDRLIPQALKIREMCNCPPLSNPDPRLLFKLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_660 EFVDSLHGQPKMPEWLSTHPSHGNRVEYLDRLIPQALKIREMCNCPPLSNPDPRLLFKLS 430 440 450 460 470 480 490 500 510 520 pF1KE5 TKHFLEESEKEDLNITKKQKMDTLPIQKQEQIPLTYIVEKRTGS :::::::::::::::::::::::::::::::::::::::::::: NP_660 TKHFLEESEKEDLNITKKQKMDTLPIQKQEQIPLTYIVEKRTGS 490 500 510 520 524 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:39:52 2016 done: Tue Nov 8 05:39:54 2016 Total Scan time: 9.130 Total Display time: -0.040 Function used was FASTA [36.3.4 Apr, 2011]