FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5664, 524 aa 1>>>pF1KE5664 524 - 524 aa - 524 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.5408+/-0.000946; mu= 16.6538+/- 0.057 mean_var=61.7724+/-12.050, 0's: 0 Z-trim(104.5): 23 B-trim: 2 in 1/49 Lambda= 0.163184 statistics sampled from 7951 (7958) to 7951 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.618), E-opt: 0.2 (0.244), width: 16 Scan time: 3.260 The best scores are: opt bits E(32554) CCDS608.1 OMA1 gene_id:115209|Hs108|chr1 ( 524) 3550 844.6 0 >>CCDS608.1 OMA1 gene_id:115209|Hs108|chr1 (524 aa) initn: 3550 init1: 3550 opt: 3550 Z-score: 4512.5 bits: 844.6 E(32554): 0 Smith-Waterman score: 3550; 100.0% identity (100.0% similar) in 524 aa overlap (1-524:1-524) 10 20 30 40 50 60 pF1KE5 MSFICGLQSAARNHVFFRFNSLSNWRKCNTLASTSRGCHQVQVNHIVNKYQGLGVNQCDR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 MSFICGLQSAARNHVFFRFNSLSNWRKCNTLASTSRGCHQVQVNHIVNKYQGLGVNQCDR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 WSFLPGNFHFYSTFNNKRTGGLSSTKSKEIWRITSKCTVWNDAFSRQLLIKEVTAVPSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 WSFLPGNFHFYSTFNNKRTGGLSSTKSKEIWRITSKCTVWNDAFSRQLLIKEVTAVPSLS 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 VLHPLSPASIRAIRNFHTSPRFQAAPVPLLLMILKPVQKLFAIIVGRGIRKWWQALPPNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 VLHPLSPASIRAIRNFHTSPRFQAAPVPLLLMILKPVQKLFAIIVGRGIRKWWQALPPNK 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 KEVVKENIRKNKWKLFLGLSSFGLLFVVFYFTHLEVSPITGRSKLLLLGKEQFRLLSELE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 KEVVKENIRKNKWKLFLGLSSFGLLFVVFYFTHLEVSPITGRSKLLLLGKEQFRLLSELE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 YEAWMEEFKNDMLTEKDARYLAVKEVLCHLIECNKDVPGISQINWVIHVVDSPIINAFVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 YEAWMEEFKNDMLTEKDARYLAVKEVLCHLIECNKDVPGISQINWVIHVVDSPIINAFVL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 PNGQMFVFTGFLNSVTDIHQLSFLLGHEIAHAVLGHAAEKAGMVHLLDFLGMIFLTMIWA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 PNGQMFVFTGFLNSVTDIHQLSFLLGHEIAHAVLGHAAEKAGMVHLLDFLGMIFLTMIWA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 ICPRDSLALLCQWIQSKLQEYMFNRPYSRKLEAEADKIGLLLAAKACADIRASSVFWQQM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 ICPRDSLALLCQWIQSKLQEYMFNRPYSRKLEAEADKIGLLLAAKACADIRASSVFWQQM 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 EFVDSLHGQPKMPEWLSTHPSHGNRVEYLDRLIPQALKIREMCNCPPLSNPDPRLLFKLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS60 EFVDSLHGQPKMPEWLSTHPSHGNRVEYLDRLIPQALKIREMCNCPPLSNPDPRLLFKLS 430 440 450 460 470 480 490 500 510 520 pF1KE5 TKHFLEESEKEDLNITKKQKMDTLPIQKQEQIPLTYIVEKRTGS :::::::::::::::::::::::::::::::::::::::::::: CCDS60 TKHFLEESEKEDLNITKKQKMDTLPIQKQEQIPLTYIVEKRTGS 490 500 510 520 524 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:39:52 2016 done: Tue Nov 8 05:39:52 2016 Total Scan time: 3.260 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]