FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6546, 106 aa 1>>>pF1KE6546 106 - 106 aa - 106 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.3835+/-0.000536; mu= 9.8491+/- 0.032 mean_var=65.2229+/-13.183, 0's: 0 Z-trim(113.8): 5 B-trim: 0 in 0/53 Lambda= 0.158809 statistics sampled from 14409 (14411) to 14409 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.815), E-opt: 0.2 (0.443), width: 16 Scan time: 1.120 The best scores are: opt bits E(32554) CCDS434.1 NDUFS5 gene_id:4725|Hs108|chr1 ( 106) 762 182.0 5.8e-47 >>CCDS434.1 NDUFS5 gene_id:4725|Hs108|chr1 (106 aa) initn: 762 init1: 762 opt: 762 Z-score: 956.6 bits: 182.0 E(32554): 5.8e-47 Smith-Waterman score: 762; 100.0% identity (100.0% similar) in 106 aa overlap (1-106:1-106) 10 20 30 40 50 60 pF1KE6 MPFLDIQKRFGLNIDRWLTIQSGEQPYKMAGRCHAFEKEWIECAHGIGYTRAEKECKIEY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 MPFLDIQKRFGLNIDRWLTIQSGEQPYKMAGRCHAFEKEWIECAHGIGYTRAEKECKIEY 10 20 30 40 50 60 70 80 90 100 pF1KE6 DDFVECLLRQKTMRRAGTIRKQRDKLIKEGKYTPPPHHIGKGEPRP :::::::::::::::::::::::::::::::::::::::::::::: CCDS43 DDFVECLLRQKTMRRAGTIRKQRDKLIKEGKYTPPPHHIGKGEPRP 70 80 90 100 106 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:17:31 2016 done: Tue Nov 8 14:17:31 2016 Total Scan time: 1.120 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]