FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6593, 51 aa 1>>>pF1KE6593 51 - 51 aa - 51 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 4.2152+/-0.000295; mu= 8.8690+/- 0.018 mean_var=34.1050+/- 6.693, 0's: 0 Z-trim(116.4): 15 B-trim: 338 in 2/53 Lambda= 0.219617 statistics sampled from 27545 (27553) to 27545 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.759), E-opt: 0.2 (0.323), width: 16 Scan time: 2.480 The best scores are: opt bits E(85289) NP_008817 (OMIM: 606153,614053) ATP synthase subun ( 51) 321 107.5 1e-24 >>NP_008817 (OMIM: 606153,614053) ATP synthase subunit e (51 aa) initn: 321 init1: 321 opt: 321 Z-score: 564.9 bits: 107.5 E(85289): 1e-24 Smith-Waterman score: 321; 100.0% identity (100.0% similar) in 51 aa overlap (1-51:1-51) 10 20 30 40 50 pF1KE6 MVAYWRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKIVKVKKE ::::::::::::::::::::::::::::::::::::::::::::::::::: NP_008 MVAYWRQAGLSYIRYSQICAKAVRDALKTEFKANAEKTSGSNVKIVKVKKE 10 20 30 40 50 51 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:39:13 2016 done: Tue Nov 8 14:39:13 2016 Total Scan time: 2.480 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]