Result of FASTA (omim) for pFN21AE6013
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE6013, 314 aa
  1>>>pF1KE6013 314 - 314 aa - 314 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.6130+/-0.000478; mu= 19.7649+/- 0.030
 mean_var=88.8823+/-22.406, 0's: 0 Z-trim(108.1): 298  B-trim: 1036 in 1/48
 Lambda= 0.136040
 statistics sampled from 15728 (16132) to 15728 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.522), E-opt: 0.2 (0.189), width:  16
 Scan time:  4.920

The best scores are:                                      opt bits E(85289)
NP_689643 (OMIM: 611267) olfactory receptor 51E1 [ ( 318)  930 193.3 5.6e-49
NP_110401 (OMIM: 611268) olfactory receptor 51E2 [ ( 320)  930 193.3 5.6e-49
NP_001005191 (OMIM: 611538) olfactory receptor 7D4 ( 312)  537 116.1 9.2e-26
NP_003691 (OMIM: 608494) olfactory receptor 2D2 [H ( 308)  536 115.9   1e-25
NP_003687 (OMIM: 608495) olfactory receptor 6A2 [H ( 327)  530 114.8 2.5e-25
NP_036492 (OMIM: 603232) olfactory receptor 1F1 [H ( 312)  527 114.2 3.6e-25
XP_011520809 (OMIM: 603232) PREDICTED: olfactory r ( 312)  527 114.2 3.6e-25
XP_011520808 (OMIM: 603232) PREDICTED: olfactory r ( 322)  527 114.2 3.7e-25
NP_001005487 (OMIM: 611677) olfactory receptor 13G ( 307)  524 113.6 5.3e-25
XP_011514322 (OMIM: 608497) PREDICTED: olfactory r ( 317)  515 111.8 1.9e-24
NP_036501 (OMIM: 608497) olfactory receptor 2F1 [H ( 317)  515 111.8 1.9e-24
XP_011514321 (OMIM: 608497) PREDICTED: olfactory r ( 317)  515 111.8 1.9e-24
NP_002539 (OMIM: 164342) olfactory receptor 1D2 [H ( 312)  514 111.6 2.1e-24
NP_003688 (OMIM: 608492) olfactory receptor 5F1 [H ( 314)  494 107.7 3.2e-23
NP_006628 (OMIM: 608496) olfactory receptor 5I1 [H ( 314)  472 103.4 6.4e-22
NP_001004729 (OMIM: 615702) olfactory receptor 5AN ( 311)  464 101.8 1.9e-21
NP_001004703 (OMIM: 614273) olfactory receptor 4C4 ( 309)  460 101.0 3.2e-21
NP_001005216 (OMIM: 615016,615082) olfactory recep ( 311)  449 98.9 1.5e-20
NP_835462 (OMIM: 608493) olfactory receptor 10A5 [ ( 317)  449 98.9 1.5e-20
NP_009091 (OMIM: 600578) olfactory receptor 2H2 [H ( 312)  435 96.1 9.8e-20
XP_011513214 (OMIM: 600578) PREDICTED: olfactory r ( 300)  430 95.1 1.9e-19
NP_001001957 (OMIM: 616729) olfactory receptor 2W3 ( 314)  413 91.8   2e-18
NP_005903 (OMIM: 155541,601665) melanocortin recep ( 332)  209 51.8 2.3e-06
NP_063941 (OMIM: 155540,602025,607948) melanocorti ( 323)  203 50.6 5.1e-06
NP_000668 (OMIM: 600445) adenosine receptor A3 iso ( 318)  196 49.2 1.3e-05
NP_005904 (OMIM: 600042) melanocortin receptor 5 [ ( 325)  195 49.0 1.5e-05
NP_002377 (OMIM: 155555,203200,266300,613098,61309 ( 317)  191 48.2 2.6e-05
NP_000721 (OMIM: 118444) cholecystokinin receptor  ( 428)  185 47.2   7e-05
NP_000673 (OMIM: 104260,607876) alpha-2B adrenergi ( 450)  183 46.8 9.5e-05
NP_000667 (OMIM: 600446) adenosine receptor A2b [H ( 332)  175 45.1 0.00023
NP_000903 (OMIM: 165196) kappa-type opioid recepto ( 380)  172 44.6 0.00038
NP_001305426 (OMIM: 165196) kappa-type opioid rece ( 409)  172 44.6  0.0004
NP_000676 (OMIM: 106165,145500,267430) type-1 angi ( 359)  170 44.2 0.00048
NP_033611 (OMIM: 106165,145500,267430) type-1 angi ( 359)  170 44.2 0.00048
NP_114438 (OMIM: 106165,145500,267430) type-1 angi ( 388)  170 44.2 0.00051
NP_114038 (OMIM: 106165,145500,267430) type-1 angi ( 394)  170 44.2 0.00051
NP_004826 (OMIM: 106165,145500,267430) type-1 angi ( 394)  170 44.2 0.00051
XP_011542714 (OMIM: 104221) PREDICTED: alpha-1A ad ( 308)  168 43.7 0.00058
XP_016868585 (OMIM: 104221) PREDICTED: alpha-1A ad ( 317)  168 43.7 0.00059
XP_011542713 (OMIM: 104221) PREDICTED: alpha-1A ad ( 324)  168 43.7  0.0006
NP_001309433 (OMIM: 104221) alpha-1A adrenergic re ( 342)  168 43.8 0.00062
NP_001309432 (OMIM: 104221) alpha-1A adrenergic re ( 370)  168 43.8 0.00065
NP_001309431 (OMIM: 104221) alpha-1A adrenergic re ( 372)  168 43.8 0.00065
NP_150645 (OMIM: 104221) alpha-1A adrenergic recep ( 429)  168 43.9 0.00071
XP_006716356 (OMIM: 104221) PREDICTED: alpha-1A ad ( 429)  168 43.9 0.00071
NP_150647 (OMIM: 104221) alpha-1A adrenergic recep ( 455)  168 43.9 0.00074
NP_000671 (OMIM: 104221) alpha-1A adrenergic recep ( 466)  168 43.9 0.00075
XP_006716355 (OMIM: 104221) PREDICTED: alpha-1A ad ( 475)  168 43.9 0.00076
NP_150646 (OMIM: 104221) alpha-1A adrenergic recep ( 475)  168 43.9 0.00076
XP_016868583 (OMIM: 104221) PREDICTED: alpha-1A ad ( 475)  168 43.9 0.00076


>>NP_689643 (OMIM: 611267) olfactory receptor 51E1 [Homo  (318 aa)
 initn: 894 init1: 706 opt: 930  Z-score: 1000.3  bits: 193.3 E(85289): 5.6e-49
Smith-Waterman score: 930; 43.0% identity (76.5% similar) in 307 aa overlap (5-311:6-311)

                10        20        30        40        50         
pF1KE6  MPTVNHSGTSHTVFHLLGIPGLQDQHMWISIPFFISYVTALLGNSLLIFIILTKRSLHE
            : . .: : : :.:.:::.. ..:...:.   :. :.:::  .:.:. :..::::
NP_689 MMVDPNGNESSATYFILIGLPGLEEAQFWLAFPLCSLYLIAVLGNLTIIYIVRTEHSLHE
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KE6 PMYLFLCMLAGADIVLSTCTIPQALAIFWFRAGDISLDRCITQLFFIHSTFISESGILLV
       :::.:::::.: ::..:: ..:. :::::: .  :..: :. :.: :::    :: .::.
NP_689 PMYIFLCMLSGIDILISTSSMPKMLAIFWFNSTTIQFDACLLQMFAIHSLSGMESTVLLA
               70        80        90       100       110       120

     120       130       140       150       160       170         
pF1KE6 MAFDHYIAICYPLRYTTILTNALIKKICVTVSLRSYGTIFPIIFLLKRLTFCQNNIIPHT
       ::::.:.:::.:::..:.::   . :: :.. .:. . . :.  ..:.: ::..::. :.
NP_689 MAFDRYVAICHPLRHATVLTLPRVTKIGVAAVVRGAALMAPLPVFIKQLPFCRSNILSHS
              130       140       150       160       170       180

     180       190       200       210       220       230         
pF1KE6 FCEHIGLAKYACNDIRINIWYGFSILMSTVVLDVVLIFISYMLILHAVFHMPSPDACHKA
       .: :  . : ::.:::.:. ::. ...:.. :: .:: .::.:::..:. . . .:  ::
NP_689 YCLHQDVMKLACDDIRVNVVYGLIVIISAIGLDSLLISFSYLLILKTVLGL-TREAQAKA
              190       200       210       220       230          

     240       250       260       270       280       290         
pF1KE6 LNTFGSHVCIIILFYGSGIFTILTQRFGRHIPPCIHIPLANVCILAPPMLNPIIYGIKTK
       ..:  :::: ...::   :   ...::...    . . :::. .:.::.::::.::.:::
NP_689 FGTCVSHVCAVFIFYVPFIGLSMVHRFSKRRDSPLPVILANIYLLVPPVLNPIVYGVKTK
     240       250       260       270       280       290         

     300       310        
pF1KE6 QIQEQVVQFLFIKQK    
       .:........ .       
NP_689 EIRQRILRLFHVATHASEP
     300       310        

>>NP_110401 (OMIM: 611268) olfactory receptor 51E2 [Homo  (320 aa)
 initn: 936 init1: 907 opt: 930  Z-score: 1000.2  bits: 193.3 E(85289): 5.6e-49
Smith-Waterman score: 930; 42.7% identity (77.5% similar) in 302 aa overlap (10-311:7-308)

               10        20        30        40        50        60
pF1KE6 MPTVNHSGTSHTVFHLLGIPGLQDQHMWISIPFFISYVTALLGNSLLIFIILTKRSLHEP
                .:..: :.:::::.  :.:...:..  ::.:..:: ...::. :.:::: :
NP_110    MSSCNFTHATFVLIGIPGLEKAHFWVGFPLLSMYVVAMFGNCIVVFIVRTERSLHAP
                  10        20        30        40        50       

               70        80        90       100       110       120
pF1KE6 MYLFLCMLAGADIVLSTCTIPQALAIFWFRAGDISLDRCITQLFFIHSTFISESGILLVM
       :::::::::. :..::: :.:. ::.::: . .::.. :.::.::::.    :: :::.:
NP_110 MYLFLCMLAAIDLALSTSTMPKILALFWFDSREISFEACLTQMFFIHALSAIESTILLAM
        60        70        80        90       100       110       

              130       140       150       160       170       180
pF1KE6 AFDHYIAICYPLRYTTILTNALIKKICVTVSLRSYGTIFPIIFLLKRLTFCQNNIIPHTF
       :::.:.:::.:::....:.:..  .: ... .:.   .::. .:.:::.::..:.. :..
NP_110 AFDRYVAICHPLRHAAVLNNTVTAQIGIVAVVRGSLFFFPLPLLIKRLAFCHSNVLSHSY
       120       130       140       150       160       170       

              190       200       210       220       230       240
pF1KE6 CEHIGLAKYACNDIRINIWYGFSILMSTVVLDVVLIFISYMLILHAVFHMPSPDACHKAL
       : :  . : :  :   :. ::.. .. .. .::..: .::.::...:...:: .   ::.
NP_110 CVHQDVMKLAYADTLPNVVYGLTAILLVMGVDVMFISLSYFLIIRTVLQLPSKSERAKAF
       180       190       200       210       220       230       

              250       260       270       280       290       300
pF1KE6 NTFGSHVCIIILFYGSGIFTILTQRFGRHIPPCIHIPLANVCILAPPMLNPIIYGIKTKQ
       .:  ::. ... ::   :   ...:::  . : ... .... .: ::..:::::: ::::
NP_110 GTCVSHIGVVLAFYVPLIGLSVVHRFGNSLHPIVRVVMGDIYLLLPPVINPIIYGAKTKQ
       240       250       260       270       280       290       

              310             
pF1KE6 IQEQVVQFLFIKQK         
       :. .:. .. :            
NP_110 IRTRVLAMFKISCDKDLQAVGGK
       300       310       320

>>NP_001005191 (OMIM: 611538) olfactory receptor 7D4 [Ho  (312 aa)
 initn: 578 init1: 473 opt: 537  Z-score: 583.5  bits: 116.1 E(85289): 9.2e-26
Smith-Waterman score: 537; 34.5% identity (63.5% similar) in 307 aa overlap (14-309:12-305)

               10           20        30         40        50      
pF1KE6 MPTVNHSGTSHTVFHLLGI---PGLQDQHMWISIPFFIS-YVTALLGNSLLIFIILTKRS
                    : :::.   : ::     . . .:.: :....::: :.:. . .   
NP_001   MEAENLTELSKFLLLGLSDDPELQP----VLFGLFLSMYLVTVLGNLLIILAVSSDSH
                 10        20            30        40        50    

         60        70        80        90       100       110      
pF1KE6 LHEPMYLFLCMLAGADIVLSTCTIPQALAIFWFRAGDISLDRCITQLFFIHSTFISESGI
       :: :::.::  :. .:: . . :.:. :. .  :. :::   :.::..:.      .. .
NP_001 LHTPMYFFLSNLSFVDICFISTTVPKMLVSIQARSKDISYMGCLTQVYFLMMFAGMDTFL
           60        70        80        90       100       110    

        120       130       140       150       160           170  
pF1KE6 LLVMAFDHYIAICYPLRYTTILTNALIKKICVTVSLRSYGTIFPI----IFLLKRLTFCQ
       : :::.:...:::.::.::.:..  :    :  . : :.  :: .    :.:.:::::  
NP_001 LAVMAYDRFVAICHPLHYTVIMNPCL----CGLLVLASWFIIFWFSLVHILLMKRLTFST
          120       130       140           150       160       170

            180       190         200       210       220       230
pF1KE6 NNIIPHTFCEHIGLAKYACNDIRIN--IWYGFSILMSTVVLDVVLIFISYMLILHAVFHM
       .. ::: :::   . : ::..  .:  . :  . :..  :. :. :..::  :. ... :
NP_001 GTEIPHFFCEPAQVLKVACSNTLLNNIVLYVATALLG--VFPVAGILFSYSQIVSSLMGM
              180       190       200         210       220        

              240       250       260       270       280          
pF1KE6 PSPDACHKALNTFGSHVCIIILFYGSGIFTILTQRFGRHIPPCIHIPLANVCI-LAPPML
        :  . .::..: :::.:.. ::::.:. . :..   .          :.:   .. :::
NP_001 SSTKGKYKAFSTCGSHLCVVSLFYGTGLGVYLSSAVTHSSQSS---STASVMYAMVTPML
      230       240       250       260       270          280     

     290       300       310      
pF1KE6 NPIIYGIKTKQIQEQVVQFLFIKQK  
       ::.::....:...  . ..:       
NP_001 NPFIYSLRNKDVKGALERLLSRADSCP
         290       300       310  

>>NP_003691 (OMIM: 608494) olfactory receptor 2D2 [Homo   (308 aa)
 initn: 521 init1: 437 opt: 536  Z-score: 582.5  bits: 115.9 E(85289): 1e-25
Smith-Waterman score: 536; 35.0% identity (63.1% similar) in 309 aa overlap (1-302:1-296)

               10        20        30        40        50        60
pF1KE6 MPTVNHSGTSHTVFHLLGIPGLQDQHMWISIPFFISYVTALLGNSLLIFIILTKRSLHEP
       :  .:.  :. : : :::.      .. . : ..  :....::: ::: .. .  .:: :
NP_003 MRQINQ--TQVTEFLLLGLSDGPHTEQLLFIVLLGVYLVTVLGNLLLISLVHVDSQLHTP
                 10        20        30        40        50        

               70        80        90       100       110       120
pF1KE6 MYLFLCMLAGADIVLSTCTIPQALAIFWFRAGDISLDRCITQLFFIHSTFISESGILLVM
       ::.::: :. ::. .::  .::::. .  :   :..  : ..:.:.     .. ..: ::
NP_003 MYFFLCNLSLADLCFSTNIVPQALVHLLSRKKVIAFTLCAARLLFFLIFGCTQCALLAVM
       60        70        80        90       100       110        

              130       140       150         160          170     
pF1KE6 AFDHYIAICYPLRYTTILTNALIKKICVTVSLRSY--GTIFPII---FLLKRLTFCQNNI
       ..:.:.::: :::: .:.:     :.:: ..  :.  : .  ..   :.: :: .  .: 
NP_003 SYDRYVAICNPLRYPNIMT----WKVCVQLATGSWTSGILVSVVDTTFIL-RLPYRGSNS
      120       130           140       150       160        170   

         180       190       200       210         220       230   
pF1KE6 IPHTFCEHIGLAKYACNDIRINIWYGFSILMSTVVL--DVVLIFISYMLILHAVFHMPSP
       : : :::  .:   : .: . .    :  ::..:.:   : ::..::  :. .: .: : 
NP_003 IAHFFCEAPALLILASTDTHASEMAIF--LMGVVILLIPVFLILVSYGRIIVTVVKMKST
           180       190       200         210       220       230 

           240       250       260       270       280       290   
pF1KE6 DACHKALNTFGSHVCIIILFYGSGIFTILTQRFGRHIPPCIHIPLANVCILAPPMLNPII
        .  ::..: :::. ..::::::.:.: .: . ...    . .  :    .. :::::.:
NP_003 VGSLKAFSTCGSHLMVVILFYGSAIITYMTPKSSKQQEKSVSVFYA----IVTPMLNPLI
             240       250       260       270           280       

           300       310    
pF1KE6 YGIKTKQIQEQVVQFLFIKQK
       :....:...            
NP_003 YSLRNKDVKAALRKVATRNFP
       290       300        

>>NP_003687 (OMIM: 608495) olfactory receptor 6A2 [Homo   (327 aa)
 initn: 518 init1: 345 opt: 530  Z-score: 575.9  bits: 114.8 E(85289): 2.5e-25
Smith-Waterman score: 530; 31.9% identity (61.2% similar) in 317 aa overlap (5-313:5-314)

               10        20        30        40        50        60
pF1KE6 MPTVNHSGTSHTVFHLLGIPGLQDQHMWISIPFFISYVTALLGNSLLIFIILTKRSLHEP
           ::::   . : :::.:.    .. .   ....:: .:  :.:.:. : .. .::.:
NP_003 MEWRNHSGRV-SEFVLLGFPAPAPLQVLLFALLLLAYVLVLTENTLIIMAIRNHSTLHKP
               10         20        30        40        50         

               70        80        90           100       110      
pF1KE6 MYLFLCMLAGADIVLSTCTIPQALAIFWFRAGD----ISLDRCITQLFFIHSTFISESGI
       ::.::  ..  .:   : :::. :: :     :    ::.. :.:::.:. .   .:  .
NP_003 MYFFLANMSFLEIWYVTVTIPKMLAGFVGSKQDHGQLISFEGCMTQLYFFLGLGCTECVL
      60        70        80        90       100       110         

        120       130       140       150       160           170  
pF1KE6 LLVMAFDHYIAICYPLRYTTILTNALIKKICVTVSLRSYGTIFPI----IFLLKRLTFCQ
       : :::.:.:.::::::.: .:...    ..:: ..  :..  : :    .::.. :..: 
NP_003 LAVMAYDRYMAICYPLHYPVIVSG----RLCVQMAAGSWAGGFGISMVKVFLISGLSYCG
     120       130       140           150       160       170     

            180       190       200       210       220       230  
pF1KE6 NNIIPHTFCEHIGLAKYACNDIRINIWYGFSILMSTVVLDVVLIFISYMLILHAVFHMPS
        ::: : ::.   : . .:.:.       : . .  ..  . .   ::. :  ::.:.::
NP_003 PNIINHFFCDVSPLLNLSCTDMSTAELTDFILAIFILLGPLSVTGASYVAITGAVMHIPS
         180       190       200       210       220       230     

            240       250       260       270       280       290  
pF1KE6 PDACHKALNTFGSHVCIIILFYGSGIFTILTQRFGRHIPPCIHIPLANVCILAPPMLNPI
         . .::..: .::. ..:.::...::     .    .     . .  . :.  :.::::
NP_003 AAGRYKAFSTCASHLTVVIIFYAASIFIYARPKALSAFDTNKLVSVLYAVIV--PLLNPI
         240       250       260       270       280         290   

            300       310                
pF1KE6 IYGIKTKQIQEQVVQFLFIKQK            
       :: ........ .   : . :             
NP_003 IYCLRNQEVKRALCCTLHLYQHQDPDPKKASRNV
           300       310       320       

>>NP_036492 (OMIM: 603232) olfactory receptor 1F1 [Homo   (312 aa)
 initn: 578 init1: 472 opt: 527  Z-score: 572.9  bits: 114.2 E(85289): 3.6e-25
Smith-Waterman score: 527; 32.8% identity (65.6% similar) in 305 aa overlap (1-302:1-298)

               10        20        30         40        50         
pF1KE6 MPTVNHSGTSHTVFHLLGIPGLQDQHMWISIPFFIS-YVTALLGNSLLIFIILTKRSLHE
       :  .:.:..:.  : :::. . : :.. . . ::.: :....::: :.:. .     :: 
NP_036 MSGTNQSSVSE--FLLLGL-SRQPQQQHLLFVFFLSMYLATVLGNLLIILSVSIDSCLHT
               10           20        30        40        50       

      60        70        80        90       100       110         
pF1KE6 PMYLFLCMLAGADIVLSTCTIPQALAIFWFRAGDISLDRCITQLFFIHSTFISESGILL-
       :::.::  :. .:: .:  :.:. ::   ...  ::.  :.::..:.   :.. ...:: 
NP_036 PMYFFLSNLSFVDICFSFTTVPKMLANHILETQTISFCGCLTQMYFVF-MFVDMDNFLLA
        60        70        80        90       100        110      

      120       130       140       150       160       170        
pF1KE6 VMAFDHYIAICYPLRYTTILTNALIKKICVTVSLRSYGTIFPIIFLLKRLTFCQNNIIPH
       :::.::..:.:.::.::. .:. :   . . . . .  ...   .:.  :.:: .: : :
NP_036 VMAYDHFVAVCHPLHYTAKMTHQLCALLVAGLWVVANLNVLLHTLLMAPLSFCADNAITH
        120       130       140       150       160       170      

      180       190       200       210       220       230        
pF1KE6 TFCEHIGLAKYACNDIRINIWYGFSILMSTVVLDVVLIFISYMLILHAVFHMPSPDACHK
        ::.   : : .:.: ..:    .:    ...   . :. ::: :  .:...::  .  :
NP_036 FFCDVTPLLKLSCSDTHLNEVIILSEGALVMITPFLCILASYMHITCTVLKVPSTKGRWK
        180       190       200       210       220       230      

      240       250       260       270       280        290       
pF1KE6 ALNTFGSHVCIIILFYGSGIFTILTQRFGRHIPPCIHIPLANVCI-LAPPMLNPIIYGIK
       :..: :::. ...::: : :...  . .. :     .  .:.:   .. :::::.::...
NP_036 AFSTCGSHLAVVLLFY-STIIAVYFNPLSSHSAE--KDTMATVLYTVVTPMLNPFIYSLR
        240       250        260         270       280       290   

       300       310      
pF1KE6 TKQIQEQVVQFLFIKQK  
       .. ..              
NP_036 NRYLKGALKKVVGRVVFSV
           300       310  

>>XP_011520809 (OMIM: 603232) PREDICTED: olfactory recep  (312 aa)
 initn: 578 init1: 472 opt: 527  Z-score: 572.9  bits: 114.2 E(85289): 3.6e-25
Smith-Waterman score: 527; 32.8% identity (65.6% similar) in 305 aa overlap (1-302:1-298)

               10        20        30         40        50         
pF1KE6 MPTVNHSGTSHTVFHLLGIPGLQDQHMWISIPFFIS-YVTALLGNSLLIFIILTKRSLHE
       :  .:.:..:.  : :::. . : :.. . . ::.: :....::: :.:. .     :: 
XP_011 MSGTNQSSVSE--FLLLGL-SRQPQQQHLLFVFFLSMYLATVLGNLLIILSVSIDSCLHT
               10           20        30        40        50       

      60        70        80        90       100       110         
pF1KE6 PMYLFLCMLAGADIVLSTCTIPQALAIFWFRAGDISLDRCITQLFFIHSTFISESGILL-
       :::.::  :. .:: .:  :.:. ::   ...  ::.  :.::..:.   :.. ...:: 
XP_011 PMYFFLSNLSFVDICFSFTTVPKMLANHILETQTISFCGCLTQMYFVF-MFVDMDNFLLA
        60        70        80        90       100        110      

      120       130       140       150       160       170        
pF1KE6 VMAFDHYIAICYPLRYTTILTNALIKKICVTVSLRSYGTIFPIIFLLKRLTFCQNNIIPH
       :::.::..:.:.::.::. .:. :   . . . . .  ...   .:.  :.:: .: : :
XP_011 VMAYDHFVAVCHPLHYTAKMTHQLCALLVAGLWVVANLNVLLHTLLMAPLSFCADNAITH
        120       130       140       150       160       170      

      180       190       200       210       220       230        
pF1KE6 TFCEHIGLAKYACNDIRINIWYGFSILMSTVVLDVVLIFISYMLILHAVFHMPSPDACHK
        ::.   : : .:.: ..:    .:    ...   . :. ::: :  .:...::  .  :
XP_011 FFCDVTPLLKLSCSDTHLNEVIILSEGALVMITPFLCILASYMHITCTVLKVPSTKGRWK
        180       190       200       210       220       230      

      240       250       260       270       280        290       
pF1KE6 ALNTFGSHVCIIILFYGSGIFTILTQRFGRHIPPCIHIPLANVCI-LAPPMLNPIIYGIK
       :..: :::. ...::: : :...  . .. :     .  .:.:   .. :::::.::...
XP_011 AFSTCGSHLAVVLLFY-STIIAVYFNPLSSHSAE--KDTMATVLYTVVTPMLNPFIYSLR
        240       250        260         270       280       290   

       300       310      
pF1KE6 TKQIQEQVVQFLFIKQK  
       .. ..              
XP_011 NRYLKGALKKVVGRVVFSV
           300       310  

>>XP_011520808 (OMIM: 603232) PREDICTED: olfactory recep  (322 aa)
 initn: 578 init1: 472 opt: 527  Z-score: 572.8  bits: 114.2 E(85289): 3.7e-25
Smith-Waterman score: 527; 32.8% identity (65.6% similar) in 305 aa overlap (1-302:11-308)

                         10        20        30         40         
pF1KE6           MPTVNHSGTSHTVFHLLGIPGLQDQHMWISIPFFIS-YVTALLGNSLLIF
                 :  .:.:..:.  : :::. . : :.. . . ::.: :....::: :.:.
XP_011 MGDRRADPRPMSGTNQSSVSE--FLLLGL-SRQPQQQHLLFVFFLSMYLATVLGNLLIIL
               10        20           30        40        50       

      50        60        70        80        90       100         
pF1KE6 IILTKRSLHEPMYLFLCMLAGADIVLSTCTIPQALAIFWFRAGDISLDRCITQLFFIHST
        .     :: :::.::  :. .:: .:  :.:. ::   ...  ::.  :.::..:.   
XP_011 SVSIDSCLHTPMYFFLSNLSFVDICFSFTTVPKMLANHILETQTISFCGCLTQMYFVF-M
        60        70        80        90       100       110       

     110        120       130       140       150       160        
pF1KE6 FISESGILL-VMAFDHYIAICYPLRYTTILTNALIKKICVTVSLRSYGTIFPIIFLLKRL
       :.. ...:: :::.::..:.:.::.::. .:. :   . . . . .  ...   .:.  :
XP_011 FVDMDNFLLAVMAYDHFVAVCHPLHYTAKMTHQLCALLVAGLWVVANLNVLLHTLLMAPL
        120       130       140       150       160       170      

      170       180       190       200       210       220        
pF1KE6 TFCQNNIIPHTFCEHIGLAKYACNDIRINIWYGFSILMSTVVLDVVLIFISYMLILHAVF
       .:: .: : : ::.   : : .:.: ..:    .:    ...   . :. ::: :  .:.
XP_011 SFCADNAITHFFCDVTPLLKLSCSDTHLNEVIILSEGALVMITPFLCILASYMHITCTVL
        180       190       200       210       220       230      

      230       240       250       260       270       280        
pF1KE6 HMPSPDACHKALNTFGSHVCIIILFYGSGIFTILTQRFGRHIPPCIHIPLANVCI-LAPP
       ..::  .  ::..: :::. ...::: : :...  . .. :     .  .:.:   .. :
XP_011 KVPSTKGRWKAFSTCGSHLAVVLLFY-STIIAVYFNPLSSHSAE--KDTMATVLYTVVTP
        240       250       260        270         280       290   

       290       300       310      
pF1KE6 MLNPIIYGIKTKQIQEQVVQFLFIKQK  
       ::::.::..... ..              
XP_011 MLNPFIYSLRNRYLKGALKKVVGRVVFSV
           300       310       320  

>>NP_001005487 (OMIM: 611677) olfactory receptor 13G1 [H  (307 aa)
 initn: 506 init1: 456 opt: 524  Z-score: 569.8  bits: 113.6 E(85289): 5.3e-25
Smith-Waterman score: 524; 31.2% identity (62.1% similar) in 311 aa overlap (4-313:1-307)

               10        20        30        40        50        60
pF1KE6 MPTVNHSGTSHTVFHLLGIPGLQDQHMWISIPFFISYVTALLGNSLLIFIILTKRSLHEP
          .::: .  : : .::.    . .  : . :.: :..:.::: :.:.  . . .:: :
NP_001    MNHSVV--TEFIILGLTKKPELQGIIFLFFLIVYLVAFLGNMLIIIAKIYNNTLHTP
                    10        20        30        40        50     

               70        80        90       100       110       120
pF1KE6 MYLFLCMLAGADIVLSTCTIPQALAIFWFRAGDISLDRCITQLFFIHSTFISESGILLVM
       ::.::  :: .::. .:  ::. :. .    . ::   :..:::..  .. .:  .. .:
NP_001 MYVFLLTLAVVDIICTTSIIPKMLGTMLTSENTISYAGCMSQLFLFTWSLGAEMVLFTTM
          60        70        80        90       100       110     

              130       140       150       160       170       180
pF1KE6 AFDHYIAICYPLRYTTILTNALIKKICVTVSLRSYGTIFPIIFLLKRLTFCQNNIIPHTF
       :.:.:.:::.::.:.::... .   .   :   .  . .    :. :::::  : : : :
NP_001 AYDRYVAICFPLHYSTIMNHHMCVALLSMVMAIAVTNSWVHTALIMRLTFCGPNTIDHFF
         120       130       140       150       160       170     

              190       200       210       220       230       240
pF1KE6 CEHIGLAKYACNDIRINIWYGFSILMSTVVLDVVLIFISYMLILHAVFHMPSPDACHKAL
       ::   :   .:. .:::  . .   .. .. : .:  ::: .:. :.... . .. .::.
NP_001 CEIPPLLALSCSPVRINEVMVYVADITLAIGDFILTCISYGFIIVAILRIRTVEGKRKAF
         180       190       200       210       220       230     

              250       260       270       280       290       300
pF1KE6 NTFGSHVCIIILFYGSGIFTILTQRFGRHIPPCIHIPLANVCILAPPMLNPIIYGIKTKQ
       .: .::. .. :.:.  :.: .  : .          .: .  :. : :::..:......
NP_001 STCSSHLTVVTLYYSPVIYTYI--RPASSYTFERDKVVAALYTLVTPTLNPMVYSFQNRE
         240       250         260       270       280       290   

               310    
pF1KE6 IQEQVVQ-FLFIKQK
       .:  . . : :.:. 
NP_001 MQAGIRKVFAFLKH 
           300        

>>XP_011514322 (OMIM: 608497) PREDICTED: olfactory recep  (317 aa)
 initn: 498 init1: 439 opt: 515  Z-score: 560.1  bits: 111.8 E(85289): 1.9e-24
Smith-Waterman score: 515; 31.3% identity (64.5% similar) in 307 aa overlap (1-302:1-298)

               10        20        30        40        50        60
pF1KE6 MPTVNHSGTSHTVFHLLGIPGLQDQHMWISIPFFISYVTALLGNSLLIFIILTKRSLHEP
       : : :.. .:.  : :::. .  : .. . . :.. ::...::: :....:     :: :
XP_011 MGTDNQTWVSE--FILLGLSSDWDTRVSLFVLFLVMYVVTVLGNCLIVLLIRLDSRLHTP
               10          20        30        40        50        

               70        80        90       100       110       120
pF1KE6 MYLFLCMLAGADIVLSTCTIPQALAIFWFRAGDISLDRCITQLFFIHSTFISESGILLVM
       ::.::  :. .:.  .: ..:: :: :  .   : .. : .::::  .    :  .: ::
XP_011 MYFFLTNLSLVDVSYATSVVPQLLAHFLAEHKAIPFQSCAAQLFFSLALGGIEFVLLAVM
       60        70        80        90       100       110        

              130       140       150       160        170         
pF1KE6 AFDHYIAICYPLRYTTILTNALIKKICVTVSLRSYGTIFPIIFLLK-RLTFCQNNIIPHT
       :.:.:.:.:  :::..:. ..:  .. .:  . .. .  :.   .  .: .:.:..: : 
XP_011 AYDRYVAVCDALRYSAIMHGGLCARLAITSWVSGFISS-PVQTAITFQLPMCRNKFIDHI
      120       130       140       150        160       170       

     180       190       200       210          220       230      
pF1KE6 FCEHIGLAKYACNDIRINIWYGFSILMSTVVLDVV---LIFISYMLILHAVFHMPSPDAC
        :: ..... :: :   :     .:..:..:: ..   :...::. :. ..... : .. 
XP_011 SCELLAVVRLACVDTSSN---EVTIMVSSIVLLMTPFCLVLLSYIQIISTILKIQSREGR
       180       190          200       210       220       230    

        240       250       260       270       280        290     
pF1KE6 HKALNTFGSHVCIIILFYGSGIFTILTQRFGRHIPPCIHIPLANVCI-LAPPMLNPIIYG
       .::..: .::. .. : :: .::: .  . .   :  ..  : .:   .  :::::.::.
XP_011 KKAFHTCASHLTVVALCYGVAIFTYIQPHSS---PSVLQEKLFSVFYAILTPMLNPMIYS
          240       250       260          270       280       290 

         300       310           
pF1KE6 IKTKQIQEQVVQFLFIKQK       
       ...:...                   
XP_011 LRNKEVKGAWQKLLWKFSGLTSKLAT
             300       310       




314 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Tue Nov  8 08:43:59 2016 done: Tue Nov  8 08:44:00 2016
 Total Scan time:  4.920 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com