Result of FASTA (omim) for pFN21AE5333
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE5333, 275 aa
  1>>>pF1KE5333 275 - 275 aa - 275 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.2247+/-0.000374; mu= 15.4832+/- 0.023
 mean_var=67.0624+/-13.363, 0's: 0 Z-trim(112.6): 50  B-trim: 34 in 1/52
 Lambda= 0.156615
 statistics sampled from 21553 (21592) to 21553 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.634), E-opt: 0.2 (0.253), width:  16
 Scan time:  5.410

The best scores are:                                      opt bits E(85289)
NP_114102 (OMIM: 606899) voltage-dependent calcium ( 275) 1840 424.6 9.6e-119
XP_016882582 (OMIM: 606899) PREDICTED: voltage-dep ( 275) 1840 424.6 9.6e-119
NP_665810 (OMIM: 606405) voltage-dependent calcium ( 275) 1384 321.6 9.9e-88
XP_005259181 (OMIM: 606899) PREDICTED: voltage-dep ( 305)  927 218.4 1.3e-56
NP_055220 (OMIM: 606404) voltage-dependent calcium ( 327)  409 101.4 2.4e-21
NP_006069 (OMIM: 602911,614256) voltage-dependent  ( 323)  387 96.4 7.4e-20
NP_006530 (OMIM: 606403) voltage-dependent calcium ( 315)  374 93.4 5.5e-19
NP_114101 (OMIM: 606900) voltage-dependent calcium ( 425)  322 81.8 2.4e-15
XP_016884020 (OMIM: 602911,614256) PREDICTED: volt ( 237)  235 62.0 1.2e-09
NP_066924 (OMIM: 603718,607626) claudin-1 [Homo sa ( 211)  138 40.0  0.0045
NP_001116867 (OMIM: 248190,610036) claudin-19 isof ( 211)  137 39.8  0.0053
NP_683763 (OMIM: 248190,610036) claudin-19 isoform ( 224)  137 39.8  0.0055


>>NP_114102 (OMIM: 606899) voltage-dependent calcium cha  (275 aa)
 initn: 1840 init1: 1840 opt: 1840  Z-score: 2252.8  bits: 424.6 E(85289): 9.6e-119
Smith-Waterman score: 1840; 100.0% identity (100.0% similar) in 275 aa overlap (1-275:1-275)

               10        20        30        40        50        60
pF1KE5 MSHCSSRALTLLSSVFGACGLLLVGIAVSTDYWLYMEEGTVLPQNQTTEVKMALHAGLWR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 MSHCSSRALTLLSSVFGACGLLLVGIAVSTDYWLYMEEGTVLPQNQTTEVKMALHAGLWR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 VCFFAGREKGRCVASEYFLEPEINLVTENTENILKTVRTATPFPMVSLFLVFTAFVISNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 VCFFAGREKGRCVASEYFLEPEINLVTENTENILKTVRTATPFPMVSLFLVFTAFVISNI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 GHIRPQRTILAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPSSSEQYFHYRYGWSFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 GHIRPQRTILAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPSSSEQYFHYRYGWSFA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 FAASSFLLKEGAGVMSVYLFTKRYAEEEMYRPHPAFYRPRLSDCSDYSGQFLQPEAWRRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_114 FAASSFLLKEGAGVMSVYLFTKRYAEEEMYRPHPAFYRPRLSDCSDYSGQFLQPEAWRRG
              190       200       210       220       230       240

              250       260       270     
pF1KE5 RSPSDISSDVSIQMTQNYPPAIKYPDHLHISTSPC
       :::::::::::::::::::::::::::::::::::
NP_114 RSPSDISSDVSIQMTQNYPPAIKYPDHLHISTSPC
              250       260       270     

>>XP_016882582 (OMIM: 606899) PREDICTED: voltage-depende  (275 aa)
 initn: 1840 init1: 1840 opt: 1840  Z-score: 2252.8  bits: 424.6 E(85289): 9.6e-119
Smith-Waterman score: 1840; 100.0% identity (100.0% similar) in 275 aa overlap (1-275:1-275)

               10        20        30        40        50        60
pF1KE5 MSHCSSRALTLLSSVFGACGLLLVGIAVSTDYWLYMEEGTVLPQNQTTEVKMALHAGLWR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSHCSSRALTLLSSVFGACGLLLVGIAVSTDYWLYMEEGTVLPQNQTTEVKMALHAGLWR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 VCFFAGREKGRCVASEYFLEPEINLVTENTENILKTVRTATPFPMVSLFLVFTAFVISNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VCFFAGREKGRCVASEYFLEPEINLVTENTENILKTVRTATPFPMVSLFLVFTAFVISNI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 GHIRPQRTILAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPSSSEQYFHYRYGWSFA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GHIRPQRTILAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPSSSEQYFHYRYGWSFA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 FAASSFLLKEGAGVMSVYLFTKRYAEEEMYRPHPAFYRPRLSDCSDYSGQFLQPEAWRRG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FAASSFLLKEGAGVMSVYLFTKRYAEEEMYRPHPAFYRPRLSDCSDYSGQFLQPEAWRRG
              190       200       210       220       230       240

              250       260       270     
pF1KE5 RSPSDISSDVSIQMTQNYPPAIKYPDHLHISTSPC
       :::::::::::::::::::::::::::::::::::
XP_016 RSPSDISSDVSIQMTQNYPPAIKYPDHLHISTSPC
              250       260       270     

>>NP_665810 (OMIM: 606405) voltage-dependent calcium cha  (275 aa)
 initn: 1384 init1: 1384 opt: 1384  Z-score: 1696.0  bits: 321.6 E(85289): 9.9e-88
Smith-Waterman score: 1384; 70.5% identity (91.6% similar) in 275 aa overlap (1-275:1-275)

               10        20        30        40        50        60
pF1KE5 MSHCSSRALTLLSSVFGACGLLLVGIAVSTDYWLYMEEGTVLPQNQTTEVKMALHAGLWR
       :: :. .:::::::::..::: :.:::::::::::.:::...::::.::.::.::.::::
NP_665 MSACGRKALTLLSSVFAVCGLGLLGIAVSTDYWLYLEEGVIVPQNQSTEIKMSLHSGLWR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 VCFFAGREKGRCVASEYFLEPEINLVTENTENILKTVRTATPFPMVSLFLVFTAFVISNI
       :::.::.:.::: . :: .  . .:..:.: :.:: .:.:::::.::::..: .:...::
NP_665 VCFLAGEERGRCFTIEYVMPMNTQLTSESTVNVLKMIRSATPFPLVSLFFMFIGFILNNI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 GHIRPQRTILAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPSSSEQYFHYRYGWSFA
       :::::.:::::::::::::::::::::::::::::::::..:: ...: ::.:.::::::
NP_665 GHIRPHRTILAFVSGIFFILSGLSLVVGLVLYISSINDEMLNRTKDAETYFNYKYGWSFA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE5 FAASSFLLKEGAGVMSVYLFTKRYAEEEMYRPHPAFYRPRLSDCSDYSGQFLQPEAWRRG
       ::: :::: :.::::::::: :::. :.::::::.:::::::.:::::::::.:.:: ::
NP_665 FAAISFLLTESAGVMSVYLFMKRYTAEDMYRPHPGFYRPRLSNCSDYSGQFLHPDAWVRG
              190       200       210       220       230       240

              250       260       270     
pF1KE5 RSPSDISSDVSIQMTQNYPPAIKYPDHLHISTSPC
       ::::::::..:.::..:::  .: ::. ..:.:::
NP_665 RSPSDISSEASLQMNSNYPALLKCPDYDQMSSSPC
              250       260       270     

>>XP_005259181 (OMIM: 606899) PREDICTED: voltage-depende  (305 aa)
 initn: 927 init1: 927 opt: 927  Z-score: 1137.3  bits: 218.4 E(85289): 1.3e-56
Smith-Waterman score: 927; 100.0% identity (100.0% similar) in 142 aa overlap (1-142:1-142)

               10        20        30        40        50        60
pF1KE5 MSHCSSRALTLLSSVFGACGLLLVGIAVSTDYWLYMEEGTVLPQNQTTEVKMALHAGLWR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MSHCSSRALTLLSSVFGACGLLLVGIAVSTDYWLYMEEGTVLPQNQTTEVKMALHAGLWR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE5 VCFFAGREKGRCVASEYFLEPEINLVTENTENILKTVRTATPFPMVSLFLVFTAFVISNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VCFFAGREKGRCVASEYFLEPEINLVTENTENILKTVRTATPFPMVSLFLVFTAFVISNI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE5 GHIRPQRTILAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPSSSEQYFHYRYGWSFA
       ::::::::::::::::::::::                                      
XP_005 GHIRPQRTILAFVSGIFFILSGGRRDVRVPVHQALRGGGDVPSTPGLLPPASQRLLRLLG
              130       140       150       160       170       180

>>NP_055220 (OMIM: 606404) voltage-dependent calcium cha  (327 aa)
 initn: 381 init1: 151 opt: 409  Z-score: 504.3  bits: 101.4 E(85289): 2.4e-21
Smith-Waterman score: 409; 31.9% identity (64.2% similar) in 254 aa overlap (1-244:1-247)

               10        20         30            40        50     
pF1KE5 MSHCSSRALTLLSSVFGACGLL-LVGIAVSTDYWLY----MEEGTVLPQNQTTEVKMA--
       : .:. :.: .: .. :: . . :..::..::::::    . .:: : ...    . :  
NP_055 MVRCD-RGLQMLLTTAGAFAAFSLMAIAIGTDYWLYSSAHICNGTNLTMDDGPPPRRARG
                10        20        30        40        50         

              60        70        80         90       100       110
pF1KE5 --LHAGLWRVCFFAGREKGRCVASEYFLEPEINLVT-ENTENILKTVRTATPFPMVSLFL
          :.:::::: . :  ::.:   ..:  :: :    ...: .:. ::... ::..: .:
NP_055 DLTHSGLWRVCCIEGIYKGHCFRINHF--PEDNDYDHDSSEYLLRIVRASSVFPILSTIL
      60        70        80          90       100       110       

              120       130       140       150       160       170
pF1KE5 VFTAFVISNIGHIRPQRTILAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPSSSEQY
       .. . .  . :.:  ... ... .::.:. .::: ..:...:::: . .  .. . ... 
NP_055 LLLGGLCIGAGRIYSRKNNIVLSAGILFVAAGLSNIIGIIVYISSNTGDPSDKRDEDKKN
       120       130       140       150       160       170       

              180       190       200       210       220       230
pF1KE5 FHYRYGWSFAFAASSFLLKEGAGVMSVYLFTKRYAEEEMYRPHPAFYRPRLSDCSDYSGQ
        :: ::::: :.: ::.. : .::..: .. ..  .:  .. .  : .   :. : :. .
NP_055 -HYNYGWSFYFGALSFIVAETVGVLAVNIYIEK-NKELRFKTKREFLKA--SSSSPYARM
        180       190       200        210       220         230   

              240       250       260       270                    
pF1KE5 FLQPEAWRRGRSPSDISSDVSIQMTQNYPPAIKYPDHLHISTSPC               
              ::.:: :                                              
NP_055 PSYRYRRRRSRSSSRSTEASPSRDVSPMGLKITGAIPMGELSMYTLSREPLKVTTAASYS
           240       250       260       270       280       290   

>>NP_006069 (OMIM: 602911,614256) voltage-dependent calc  (323 aa)
 initn: 359 init1: 129 opt: 387  Z-score: 477.5  bits: 96.4 E(85289): 7.4e-20
Smith-Waterman score: 387; 30.1% identity (60.8% similar) in 286 aa overlap (7-274:6-284)

               10        20         30           40        50      
pF1KE5 MSHCSSRALTLLSSVFGACGLL-LVGIAVSTDYWLYME---EGTVLPQNQTTEV--KMAL
             :.. .: .. :: . . :. :::.:::::: .   .   . .:.:..   ..  
NP_006  MGLFDRGVQMLLTTVGAFAAFSLMTIAVGTDYWLYSRGVCKTKSVSENETSKKNEEVMT
                10        20        30        40        50         

           60        70        80        90       100       110    
pF1KE5 HAGLWRVCFFAGREKGRCVASEYFLEPEINLVTENTENILKTVRTATPFPMVSLFLVFTA
       :.::::.: . :  :: :   ..: : . .  ....: .:..::... ::..:..:.: .
NP_006 HSGLWRTCCLEGNFKGLCKQIDHFPE-DADYEADTAEYFLRAVRASSIFPILSVILLFMG
      60        70        80         90       100       110        

          120       130       140       150       160       170    
pF1KE5 FVISNIGHIRPQRTILAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPSSSEQYFH-Y
        .    ...   :  . . .::::. .::: ..:...:::.   .    ::.:..  . :
NP_006 GLCIAASEFYKTRHNIILSAGIFFVSAGLSNIIGIIVYISANAGD----PSKSDSKKNSY
      120       130       140       150       160           170    

           180       190       200             210            220  
pF1KE5 RYGWSFAFAASSFLLKEGAGVMSVYLFTKRY------AEEEMYRPHPAF-----YRPRLS
        ::::: :.: ::.. : .::..:..:  :.      :.   :    :.     :: : .
NP_006 SYGWSFYFGALSFIIAEMVGVLAVHMFIDRHKQLRATARATDYLQASAITRIPSYRYRYQ
          180       190       200       210       220       230    

            230       240       250       260       270            
pF1KE5 DCSDYSGQFLQPEAWRRGRSPSDISSDVSIQMTQNYPPAIKYPDHLHISTSPC       
         :  :..  .: .  :  ::  :..  ..  :.    ...  : :. .:.:        
NP_006 RRSRSSSRSTEP-SHSRDASPVGIKGFNTLPSTEISMYTLSR-DPLKAATTPTATYNSDR
          240        250       260       270        280       290  

NP_006 DNSFLQVHNCIQKENKDSLHSNTANRRTTPV
            300       310       320   

>>NP_006530 (OMIM: 606403) voltage-dependent calcium cha  (315 aa)
 initn: 331 init1: 147 opt: 374  Z-score: 461.8  bits: 93.4 E(85289): 5.5e-19
Smith-Waterman score: 374; 29.9% identity (64.7% similar) in 224 aa overlap (1-218:1-217)

               10        20         30           40        50      
pF1KE5 MSHCSSRALTLLSSVFGACGLL-LVGIAVSTDYWLYME---EGTVLPQNQTTEV--KMAL
       :  :. :.. .: .. :: . . :. :::.:::::: .   .     .:.:..   ..  
NP_006 MRMCD-RGIQMLITTVGAFAAFSLMTIAVGTDYWLYSRGVCRTKSTSDNETSRKNEEVMT
                10        20        30        40        50         

           60        70        80        90       100       110    
pF1KE5 HAGLWRVCFFAGREKGRCVASEYFLEPEINLVTENTENILKTVRTATPFPMVSLFLVFTA
       :.::::.: . :  .: :   ..: : . .   ...: .:..::... ::..:. :.: .
NP_006 HSGLWRTCCLEGAFRGVCKKIDHFPE-DADYEQDTAEYLLRAVRASSVFPILSVTLLFFG
      60        70        80         90       100       110        

          120       130       140       150       160       170    
pF1KE5 FVISNIGHIRPQRTILAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPSSSEQYFHYR
        .    .... .:  . . .::::. .::: ..:...:::.   .    :.. ..   : 
NP_006 GLCVAASEFHRSRHNVILSAGIFFVSAGLSNIIGIIVYISANAGD----PGQRDSKKSYS
      120       130       140       150       160           170    

          180       190       200       210       220       230    
pF1KE5 YGWSFAFAASSFLLKEGAGVMSVYLFTKRYAEEEMYRPHPAFYRPRLSDCSDYSGQFLQP
       ::::: :.: ::.. : .::..:... ... ..   . :  : .                
NP_006 YGWSFYFGAFSFIIAEIVGVVAVHIYIEKH-QQLRAKSHSEFLKKSTFARLPPYRYRFRR
          180       190       200        210       220       230   

          240       250       260       270                        
pF1KE5 EAWRRGRSPSDISSDVSIQMTQNYPPAIKYPDHLHISTSPC                   
                                                                   
NP_006 RSSSRSTEPRSRDLSPISKGFHTIPSTDISMFTLSRDPSKITMGTLLNSDRDHAFLQFHN
           240       250       260       270       280       290   

>>NP_114101 (OMIM: 606900) voltage-dependent calcium cha  (425 aa)
 initn: 391 init1: 119 opt: 322  Z-score: 396.4  bits: 81.8 E(85289): 2.4e-15
Smith-Waterman score: 360; 32.0% identity (61.3% similar) in 225 aa overlap (4-206:15-233)

                          10          20        30                 
pF1KE5            MSHCSSRALTLLSSV--FGACGLLLVGIAVSTDYWLYM-----------
                     : . . .::..:  :.: ::.   ::.:::::::            
NP_114 MESLKRWNEERGLWCEKGVQVLLTTVGAFAAFGLMT--IAISTDYWLYTRALICNTTNLT
               10        20        30          40        50        

            40           50           60        70        80       
pF1KE5 ---EEGTVLPQ---NQTTEVKMA---LHAGLWRVCFFAGREKGRCVASEYFLEPEINLVT
          ..::  :.   . ..: :      :.::::.: . : ..: ::  ..: : . .   
NP_114 AGGDDGT--PHRGGGGASEKKDPGGLTHSGLWRICCLEGLKRGVCVKINHFPE-DTDYDH
       60          70        80        90       100        110     

        90       100       110       120       130       140       
pF1KE5 ENTENILKTVRTATPFPMVSLFLVFTAFVISNIGHIRPQRTILAFVSGIFFILSGLSLVV
       ...: .:..::... ::..: .:.. . :    ...  ..  . . .::.:. .::: ..
NP_114 DSAEYLLRVVRASSIFPILSAILLLLGGVCVAASRVYKSKRNIILGAGILFVAAGLSNII
         120       130       140       150       160       170     

       150       160       170       180       190       200       
pF1KE5 GLVLYISSINDEVMNRPSSSEQYFHYRYGWSFAFAASSFLLKEGAGVMSVYLFTKRYAEE
       :...:::.   :   .  . :.  :: ::::: :.. ::.: :  ::..: .. .:  : 
NP_114 GVIVYISANAGEPGPK-RDEEKKNHYSYGWSFYFGGLSFILAEVIGVLAVNIYIERSREA
         180       190        200       210       220       230    

       210       220       230       240       250       260       
pF1KE5 EMYRPHPAFYRPRLSDCSDYSGQFLQPEAWRRGRSPSDISSDVSIQMTQNYPPAIKYPDH
                                                                   
NP_114 HCQSRSDLLKAGGGAGGSGGSGPSAILRLPSYRFRYRRRSRSSSRSSEPSPSRDASPGGP
          240       250       260       270       280       290    

>>XP_016884020 (OMIM: 602911,614256) PREDICTED: voltage-  (237 aa)
 initn: 254 init1: 129 opt: 235  Z-score: 293.9  bits: 62.0 E(85289): 1.2e-09
Smith-Waterman score: 235; 29.5% identity (58.9% similar) in 190 aa overlap (97-274:15-198)

         70        80        90       100       110       120      
pF1KE5 REKGRCVASEYFLEPEINLVTENTENILKTVRTATPFPMVSLFLVFTAFVISNIGHIRPQ
                                     ::... ::..:..:.: . .    ...   
XP_016                 MGLNWKNQALGCWAVRASSIFPILSVILLFMGGLCIAASEFYKT
                               10        20        30        40    

        130       140       150       160       170        180     
pF1KE5 RTILAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPSSSEQYFH-YRYGWSFAFAASS
       :  . . .::::. .::: ..:...:::.   .    ::.:..  . : ::::: :.: :
XP_016 RHNIILSAGIFFVSAGLSNIIGIIVYISANAGD----PSKSDSKKNSYSYGWSFYFGALS
           50        60        70            80        90       100

         190       200             210            220       230    
pF1KE5 FLLKEGAGVMSVYLFTKRY------AEEEMYRPHPAF-----YRPRLSDCSDYSGQFLQP
       :.. : .::..:..:  :.      :.   :    :.     :: : .  :  :..  .:
XP_016 FIIAEMVGVLAVHMFIDRHKQLRATARATDYLQASAITRIPSYRYRYQRRSRSSSRSTEP
              110       120       130       140       150       160

          240       250       260       270                        
pF1KE5 EAWRRGRSPSDISSDVSIQMTQNYPPAIKYPDHLHISTSPC                   
        .  :  ::  :..  ..  :.    ...  : :. .:.:                    
XP_016 -SHSRDASPVGIKGFNTLPSTEISMYTLSR-DPLKAATTPTATYNSDRDNSFLQVHNCIQ
               170       180        190       200       210        

XP_016 KENKDSLHSNTANRRTTPV
      220       230       

>>NP_066924 (OMIM: 603718,607626) claudin-1 [Homo sapien  (211 aa)
 initn:  93 init1:  50 opt: 138  Z-score: 176.2  bits: 40.0 E(85289): 0.0045
Smith-Waterman score: 138; 20.6% identity (52.5% similar) in 223 aa overlap (20-227:5-210)

               10        20        30        40               50   
pF1KE5 MSHCSSRALTLLSSVFGACGLLLVGIAVSTDYWLYMEEGTVLPQ-------NQTTEVKMA
                          :: :.:. ..   :.    .:.:::       ...  . .:
NP_066                MANAGLQLLGFILAFLGWIGAIVSTALPQWRIYSYAGDNIVTAQA
                              10        20        30        40     

            60        70        80        90       100       110   
pF1KE5 LHAGLWRVCFFAGREKGRCVASEYFLEPEINLVTENTENILKTVRTATPFPMVSLFLVFT
       .. :::  :   .  . .: . . .:            :. .:....  . .:...:   
NP_066 MYEGLWMSCVSQSTGQIQCKVFDSLL------------NLSSTLQATRALMVVGILLGVI
          50        60        70                    80        90   

           120               130       140       150       160     
pF1KE5 AFVISNIGHI--------RPQRTILAFVSGIFFILSGLSLVVGLVLYISSINDEVMNRPS
       :. ....:          . :.  .: ..: .:.:.::...:. . : . : .: ..  .
NP_066 AIFVATVGMKCMKCLEDDEVQKMRMAVIGGAIFLLAGLAILVATAWYGNRIVQEFYDPMT
           100       110       120       130       140       150   

         170       180       190       200       210       220     
pF1KE5 SSEQYFHYRYGWSFAFAASSFLLKEGAGVMSVYLFTKRYAEEEMYRPHPAFYRPRLSDCS
         .  ...  .   ..::.:. :  ::  .      .. .     ::.:   .:  :. .
NP_066 PVNARYEFGQALFTGWAAASLCLLGGA--LLCCSCPRKTTSYPTPRPYP---KPAPSSGK
           160       170       180         190       200           

         230       240       250       260       270     
pF1KE5 DYSGQFLQPEAWRRGRSPSDISSDVSIQMTQNYPPAIKYPDHLHISTSPC
       ::                                                
NP_066 DYV                                               
      210                                                




275 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Mon Nov  7 23:52:04 2016 done: Mon Nov  7 23:52:04 2016
 Total Scan time:  5.410 Total Display time: -0.010

Function used was FASTA [36.3.4 Apr, 2011]
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