FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE4296, 3140 aa 1>>>pF1KE4296 3140 - 3140 aa - 3140 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 13.4438+/-0.00152; mu= -7.9454+/- 0.093 mean_var=598.0238+/-119.537, 0's: 0 Z-trim(112.0): 36 B-trim: 43 in 1/53 Lambda= 0.052446 statistics sampled from 12820 (12834) to 12820 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.672), E-opt: 0.2 (0.394), width: 16 Scan time: 11.200 The best scores are: opt bits E(32554) CCDS43206.1 HTT gene_id:3064|Hs108|chr4 (3142) 20552 1572.9 0 >>CCDS43206.1 HTT gene_id:3064|Hs108|chr4 (3142 aa) initn: 20466 init1: 20466 opt: 20552 Z-score: 8420.4 bits: 1572.9 E(32554): 0 Smith-Waterman score: 20552; 99.9% identity (99.9% similar) in 3142 aa overlap (1-3140:1-3142) 10 20 30 40 50 pF1KE4 MATLEKLMKAFESLKSFQQQQQQQQQQQQQQQQQQQ--PPPPPPPPPPPQLPQPPPQAQP :::::::::::::::::::::::::::::::::::: :::::::::::::::::::::: CCDS43 MATLEKLMKAFESLKSFQQQQQQQQQQQQQQQQQQQQQPPPPPPPPPPPQLPQPPPQAQP 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE4 LLPQPQPPPPPPPPPPGPAVAEEPLHRPKKELSATKKDRVNHCLTICENIVAQSVRNSPE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LLPQPQPPPPPPPPPPGPAVAEEPLHRPKKELSATKKDRVNHCLTICENIVAQSVRNSPE 70 80 90 100 110 120 120 130 140 150 160 170 pF1KE4 FQKLLGIAMELFLLCSDDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 FQKLLGIAMELFLLCSDDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAP 130 140 150 160 170 180 180 190 200 210 220 230 pF1KE4 RSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRTSKRPEESVQETLAAAVPKIMASFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 RSLRAALWRFAELAHLVRPQKCRPYLVNLLPCLTRTSKRPEESVQETLAAAVPKIMASFG 190 200 210 220 230 240 240 250 260 270 280 290 pF1KE4 NFANDNEIKVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYSWLLNVLLGLLV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 NFANDNEIKVLLKAFIANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYSWLLNVLLGLLV 250 260 270 280 290 300 300 310 320 330 340 350 pF1KE4 PVEDEHSTLLILGVLLTLRYLVPLLQQQVKDTSLKGSFGVTRKEMEVSPSAEQLVQVYEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 PVEDEHSTLLILGVLLTLRYLVPLLQQQVKDTSLKGSFGVTRKEMEVSPSAEQLVQVYEL 310 320 330 340 350 360 360 370 380 390 400 410 pF1KE4 TLHHTQHQDHNVVTGALELLQQLFRTPPPELLQTLTAVGGIGQLTAAKEESGGRSRSGSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 TLHHTQHQDHNVVTGALELLQQLFRTPPPELLQTLTAVGGIGQLTAAKEESGGRSRSGSI 370 380 390 400 410 420 420 430 440 450 460 470 pF1KE4 VELIAGGGSSCSPVLSRKQKGKVLLGEEEALEDDSESRSDVSSSALTASVKDEISGELAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 VELIAGGGSSCSPVLSRKQKGKVLLGEEEALEDDSESRSDVSSSALTASVKDEISGELAA 430 440 450 460 470 480 480 490 500 510 520 530 pF1KE4 SSGVSTPGSAGHDIITEQPRSQHTLQADSVDLASCDLTSSATDGDEEDILSHSSSQVSAV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 SSGVSTPGSAGHDIITEQPRSQHTLQADSVDLASCDLTSSATDGDEEDILSHSSSQVSAV 490 500 510 520 530 540 540 550 560 570 580 590 pF1KE4 PSDPAMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLDGTDNQYLGLQIGQPQD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 PSDPAMDLNDGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLDGTDNQYLGLQIGQPQD 550 560 570 580 590 600 600 610 620 630 640 650 pF1KE4 EDEEATGILPDEASEAFRNSSMALQQAHLLKNMSHCRQPSDSSVDKFVLRDEATEPGDQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 EDEEATGILPDEASEAFRNSSMALQQAHLLKNMSHCRQPSDSSVDKFVLRDEATEPGDQE 610 620 630 640 650 660 660 670 680 690 700 710 pF1KE4 NKPCRIKGDIGQSTDDDSAPLVHCVRLLSASFLLTGGKNVLVPDRDVRVSVKALALSCVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 NKPCRIKGDIGQSTDDDSAPLVHCVRLLSASFLLTGGKNVLVPDRDVRVSVKALALSCVG 670 680 690 700 710 720 720 730 740 750 760 770 pF1KE4 AAVALHPESFFSKLYKVPLDTTEYPEEQYVSDILNYIDHGDPQVRGATAILCGTLICSIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 AAVALHPESFFSKLYKVPLDTTEYPEEQYVSDILNYIDHGDPQVRGATAILCGTLICSIL 730 740 750 760 770 780 780 790 800 810 820 830 pF1KE4 SRSRFHVGDWMGTIRTLTGNTFSLADCIPLLRKTLKDESSVTCKLACTAVRNCVMSLCSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 SRSRFHVGDWMGTIRTLTGNTFSLADCIPLLRKTLKDESSVTCKLACTAVRNCVMSLCSS 790 800 810 820 830 840 840 850 860 870 880 890 pF1KE4 SYSELGLQLIIDVLTLRNSSYWLVRTELLETLAEIDFRLVSFLEAKAENLHRGAHHYTGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 SYSELGLQLIIDVLTLRNSSYWLVRTELLETLAEIDFRLVSFLEAKAENLHRGAHHYTGL 850 860 870 880 890 900 900 910 920 930 940 950 pF1KE4 LKLQERVLNNVVIHLLGDEDPRVRHVAAASLIRLVPKLFYKCDQGQADPVVAVARDQSSV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LKLQERVLNNVVIHLLGDEDPRVRHVAAASLIRLVPKLFYKCDQGQADPVVAVARDQSSV 910 920 930 940 950 960 960 970 980 990 1000 1010 pF1KE4 YLKLLMHETQPPSHFSVSTITRIYRGYNLLPSITDVTMENNLSRVIAAVSHELITSTTRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 YLKLLMHETQPPSHFSVSTITRIYRGYNLLPSITDVTMENNLSRVIAAVSHELITSTTRA 970 980 990 1000 1010 1020 1020 1030 1040 1050 1060 1070 pF1KE4 LTFGCCEALCLLSTAFPVCIWSLGWHCGVPPLSASDESRKSCTVGMATMILTLLSSAWFP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LTFGCCEALCLLSTAFPVCIWSLGWHCGVPPLSASDESRKSCTVGMATMILTLLSSAWFP 1030 1040 1050 1060 1070 1080 1080 1090 1100 1110 1120 1130 pF1KE4 LDLSAHQDALILAGNLLAASAPKSLRSSWASEEEANPAATKQEEVWPALGDRALVPMVEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LDLSAHQDALILAGNLLAASAPKSLRSSWASEEEANPAATKQEEVWPALGDRALVPMVEQ 1090 1100 1110 1120 1130 1140 1140 1150 1160 1170 1180 1190 pF1KE4 LFSHLLKVINICAHVLDDVAPGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEQASVPLSP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LFSHLLKVINICAHVLDDVAPGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEQASVPLSP 1150 1160 1170 1180 1190 1200 1200 1210 1220 1230 1240 1250 pF1KE4 KKGSEASAASRQSDTSGPVTTSKSSSLGSFYHLPSYLKLHDVLKATHANYKVTLDLQNST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KKGSEASAASRQSDTSGPVTTSKSSSLGSFYHLPSYLKLHDVLKATHANYKVTLDLQNST 1210 1220 1230 1240 1250 1260 1260 1270 1280 1290 1300 1310 pF1KE4 EKFGGFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFSREPMMATVCVQQLLKTLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 EKFGGFLRSALDVLSQILELATLQDIGKCVEEILGYLKSCFSREPMMATVCVQQLLKTLF 1270 1280 1290 1300 1310 1320 1320 1330 1340 1350 1360 1370 pF1KE4 GTNLASQFDGLSSNPSKSQGRAQRLGSSSVRPGLYHYCFMAPYTHFTQALADASLRNMVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 GTNLASQFDGLSSNPSKSQGRAQRLGSSSVRPGLYHYCFMAPYTHFTQALADASLRNMVQ 1330 1340 1350 1360 1370 1380 1380 1390 1400 1410 1420 1430 pF1KE4 AEQENDTSGWFDVLQKVSTQLKTNLTSVTKNRADKNAIHNHIRLFEPLVIKALKQYTTTT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 AEQENDTSGWFDVLQKVSTQLKTNLTSVTKNRADKNAIHNHIRLFEPLVIKALKQYTTTT 1390 1400 1410 1420 1430 1440 1440 1450 1460 1470 1480 1490 pF1KE4 CVQLQKQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 CVQLQKQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFF 1450 1460 1470 1480 1490 1500 1500 1510 1520 1530 1540 1550 pF1KE4 LVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LVLLSYERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADA 1510 1520 1530 1540 1550 1560 1560 1570 1580 1590 1600 1610 pF1KE4 GKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADIILPMLAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 GKELETQKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADIILPMLAK 1570 1580 1590 1600 1610 1620 1620 1630 1640 1650 1660 1670 pF1KE4 QQMHIDSHEALGVLNTLFEILAPSSLRPVDMLLRSMFVTPNTMASVSTVQLWISGILAIL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 QQMHIDSHEALGVLNTLFEILAPSSLRPVDMLLRSMFVTPNTMASVSTVQLWISGILAIL 1630 1640 1650 1660 1670 1680 1680 1690 1700 1710 1720 1730 pF1KE4 RVLISQSTEDIVLSRIQELSFSPYLISCTVINRLRDGDSTSTLEEHSEGKQIKNLPEETF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 RVLISQSTEDIVLSRIQELSFSPYLISCTVINRLRDGDSTSTLEEHSEGKQIKNLPEETF 1690 1700 1710 1720 1730 1740 1740 1750 1760 1770 1780 1790 pF1KE4 SRFLLQLVGILLEDIVTKQLKVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAAT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 SRFLLQLVGILLEDIVTKQLKVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAAT 1750 1760 1770 1780 1790 1800 1800 1810 1820 1830 1840 1850 pF1KE4 RLFRSDGCGGSFYTLDSLNLRARSMITTHPALVLLWCQILLLVNHTDYRWWAEVQQTPKR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 RLFRSDGCGGSFYTLDSLNLRARSMITTHPALVLLWCQILLLVNHTDYRWWAEVQQTPKR 1810 1820 1830 1840 1850 1860 1860 1870 1880 1890 1900 1910 pF1KE4 HSLSSTKLLSPQMSGEEEDSDLAAKLGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 HSLSSTKLLSPQMSGEEEDSDLAAKLGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLI 1870 1880 1890 1900 1910 1920 1920 1930 1940 1950 1960 1970 pF1KE4 VNHIQDLISLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSTPTMLKKTLQCLEGI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 VNHIQDLISLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSTPTMLKKTLQCLEGI 1930 1940 1950 1960 1970 1980 1980 1990 2000 2010 2020 2030 pF1KE4 HLSQSGAVLTLYVDRLLCTPFRVLARMVDILACRRVEMLLAANLQSSMAQLPMEELNRIQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 HLSQSGAVLTLYVDRLLCTPFRVLARMVDILACRRVEMLLAANLQSSMAQLPMEELNRIQ 1990 2000 2010 2020 2030 2040 2040 2050 2060 2070 2080 2090 pF1KE4 EYLQSSGLAQRHQRLYSLLDRFRLSTMQDSLSPSPPVSSHPLDGDGHVSLETVSPDKDWY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 EYLQSSGLAQRHQRLYSLLDRFRLSTMQDSLSPSPPVSSHPLDGDGHVSLETVSPDKDWY 2050 2060 2070 2080 2090 2100 2100 2110 2120 2130 2140 2150 pF1KE4 VHLVKSQCWTRSDSALLEGAELVNRIPAEDMNAFMMNSEFNLSLLAPCLSLGMSEISGGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 VHLVKSQCWTRSDSALLEGAELVNRIPAEDMNAFMMNSEFNLSLLAPCLSLGMSEISGGQ 2110 2120 2130 2140 2150 2160 2160 2170 2180 2190 2200 2210 pF1KE4 KSALFEAAREVTLARVSGTVQQLPAVHHVFQPELPAEPAAYWSKLNDLFGDAALYQSLPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 KSALFEAAREVTLARVSGTVQQLPAVHHVFQPELPAEPAAYWSKLNDLFGDAALYQSLPT 2170 2180 2190 2200 2210 2220 2220 2230 2240 2250 2260 2270 pF1KE4 LARALAQYLVVVSKLPSHLHLPPEKEKDIVKFVVATLEALSWHLIHEQIPLSLDLQAGLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 LARALAQYLVVVSKLPSHLHLPPEKEKDIVKFVVATLEALSWHLIHEQIPLSLDLQAGLD 2230 2240 2250 2260 2270 2280 2280 2290 2300 2310 2320 2330 pF1KE4 CCCLALQLPGLWSVVSSTEFVTHACSLIHCVHFILEAVAVQPGEQLLSPERRTNTPKAIS ::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::: CCDS43 CCCLALQLPGLWSVVSSTEFVTHACSLIYCVHFILEAVAVQPGEQLLSPERRTNTPKAIS 2290 2300 2310 2320 2330 2340 2340 2350 2360 2370 2380 2390 pF1KE4 EEEEEVDPNTQNPKYITAACEMVAEMVESLQSVLALGHKRNSGVPAFLTPLLRNIIISLA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 EEEEEVDPNTQNPKYITAACEMVAEMVESLQSVLALGHKRNSGVPAFLTPLLRNIIISLA 2350 2360 2370 2380 2390 2400 2400 2410 2420 2430 2440 2450 pF1KE4 RLPLVNSYTRVPPLVWKLGWSPKPGGDFGTAFPEIPVEFLQEKEVFKEFIYRINTLGWTS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 RLPLVNSYTRVPPLVWKLGWSPKPGGDFGTAFPEIPVEFLQEKEVFKEFIYRINTLGWTS 2410 2420 2430 2440 2450 2460 2460 2470 2480 2490 2500 2510 pF1KE4 RTQFEETWATLLGVLVTQPLVMEQEESPPEEDTERTQINVLAVQAITSLVLSAMTVPVAG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 RTQFEETWATLLGVLVTQPLVMEQEESPPEEDTERTQINVLAVQAITSLVLSAMTVPVAG 2470 2480 2490 2500 2510 2520 2520 2530 2540 2550 2560 2570 pF1KE4 NPAVSCLEQQPRNKPLKALDTRFGRKLSIIRGIVEQEIQAMVSKRENIATHHLYQAWDPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 NPAVSCLEQQPRNKPLKALDTRFGRKLSIIRGIVEQEIQAMVSKRENIATHHLYQAWDPV 2530 2540 2550 2560 2570 2580 2580 2590 2600 2610 2620 2630 pF1KE4 PSLSPATTGALISHEKLLLQINPERELGSMSYKLGQVSIHSVWLGNSITPLREEEWDEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 PSLSPATTGALISHEKLLLQINPERELGSMSYKLGQVSIHSVWLGNSITPLREEEWDEEE 2590 2600 2610 2620 2630 2640 2640 2650 2660 2670 2680 2690 pF1KE4 EEEADAPAPSSPPTSPVNSRKHRAGVDIHSCSQFLLELYSRWILPSSSARRTPAILISEV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 EEEADAPAPSSPPTSPVNSRKHRAGVDIHSCSQFLLELYSRWILPSSSARRTPAILISEV 2650 2660 2670 2680 2690 2700 2700 2710 2720 2730 2740 2750 pF1KE4 VRSLLVVSDLFTERNQFELMYVTLTELRRVHPSEDEILAQYLVPATCKAAAVLGMDKAVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 VRSLLVVSDLFTERNQFELMYVTLTELRRVHPSEDEILAQYLVPATCKAAAVLGMDKAVA 2710 2720 2730 2740 2750 2760 2760 2770 2780 2790 2800 2810 pF1KE4 EPVSRLLESTLRSSHLPSRVGALHGILYVLECDLLDDTAKQLIPVISDYLLSNLKGIAHC :::::::::::::::::::::::::.:::::::::::::::::::::::::::::::::: CCDS43 EPVSRLLESTLRSSHLPSRVGALHGVLYVLECDLLDDTAKQLIPVISDYLLSNLKGIAHC 2770 2780 2790 2800 2810 2820 2820 2830 2840 2850 2860 2870 pF1KE4 VNIHSQQHVLVMCATAFYLIENYPLDVGPEFSASIIQMCGVMLSGSEESTPSIIYHCALR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 VNIHSQQHVLVMCATAFYLIENYPLDVGPEFSASIIQMCGVMLSGSEESTPSIIYHCALR 2830 2840 2850 2860 2870 2880 2880 2890 2900 2910 2920 2930 pF1KE4 GLERLLLSEQLSRLDAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKVSPGRTSD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 GLERLLLSEQLSRLDAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKVSPGRTSD 2890 2900 2910 2920 2930 2940 2940 2950 2960 2970 2980 2990 pF1KE4 PNPAAPDSESVIVAMERVSVLFDRIRKGFPCEARVVARILPQFLDDFFPPQDIMNKVIGE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 PNPAAPDSESVIVAMERVSVLFDRIRKGFPCEARVVARILPQFLDDFFPPQDIMNKVIGE 2950 2960 2970 2980 2990 3000 3000 3010 3020 3030 3040 3050 pF1KE4 FLSNQQPYPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQRAPVAMATWSLSCFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 FLSNQQPYPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQRAPVAMATWSLSCFF 3010 3020 3030 3040 3050 3060 3060 3070 3080 3090 3100 3110 pF1KE4 VSASTSPWVAAILPHVISRMGKLEQVDVNLFCLVATDFYRHQIEEELDRRAFQSVLEVVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS43 VSASTSPWVAAILPHVISRMGKLEQVDVNLFCLVATDFYRHQIEEELDRRAFQSVLEVVA 3070 3080 3090 3100 3110 3120 3120 3130 3140 pF1KE4 APGSPYHRLLTCLRNVHKVTTC :::::::::::::::::::::: CCDS43 APGSPYHRLLTCLRNVHKVTTC 3130 3140 3140 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 20:43:46 2016 done: Mon Nov 7 20:43:48 2016 Total Scan time: 11.200 Total Display time: 0.500 Function used was FASTA [36.3.4 Apr, 2011]