FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5156, 113 aa 1>>>pF1KE5156 113 - 113 aa - 113 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.4387+/-0.000321; mu= -1.2042+/- 0.020 mean_var=180.0985+/-37.719, 0's: 0 Z-trim(120.8): 218 B-trim: 33 in 1/57 Lambda= 0.095569 statistics sampled from 36229 (36576) to 36229 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.804), E-opt: 0.2 (0.429), width: 16 Scan time: 3.620 The best scores are: opt bits E(85289) NP_001166947 (OMIM: 615950,615959) striated muscle ( 113) 767 116.8 7.7e-27 XP_016858651 (OMIM: 615950,615959) PREDICTED: stri ( 170) 767 116.9 1e-26 XP_016858650 (OMIM: 615950,615959) PREDICTED: stri ( 180) 761 116.1 1.9e-26 XP_016858648 (OMIM: 615950,615959) PREDICTED: stri (1830) 753 116.0 2.1e-25 XP_006712256 (OMIM: 615950,615959) PREDICTED: stri (2418) 753 116.1 2.6e-25 XP_005246297 (OMIM: 615950,615959) PREDICTED: stri (2418) 753 116.1 2.6e-25 XP_016858647 (OMIM: 615950,615959) PREDICTED: stri (2418) 753 116.1 2.6e-25 XP_005246298 (OMIM: 615950,615959) PREDICTED: stri (2418) 753 116.1 2.6e-25 XP_005246296 (OMIM: 615950,615959) PREDICTED: stri (2475) 753 116.1 2.6e-25 XP_005246299 (OMIM: 615950,615959) PREDICTED: stri (2480) 753 116.1 2.6e-25 XP_006712252 (OMIM: 615950,615959) PREDICTED: stri (3163) 753 116.2 3.1e-25 XP_005246294 (OMIM: 615950,615959) PREDICTED: stri (3173) 753 116.2 3.1e-25 XP_016858646 (OMIM: 615950,615959) PREDICTED: stri (3175) 753 116.2 3.2e-25 XP_011508785 (OMIM: 615950,615959) PREDICTED: stri (3183) 753 116.2 3.2e-25 NP_005867 (OMIM: 615950,615959) striated muscle pr (3267) 753 116.2 3.2e-25 XP_011508781 (OMIM: 615950,615959) PREDICTED: stri (3277) 753 116.2 3.2e-25 >>NP_001166947 (OMIM: 615950,615959) striated muscle pre (113 aa) initn: 767 init1: 767 opt: 767 Z-score: 602.8 bits: 116.8 E(85289): 7.7e-27 Smith-Waterman score: 767; 100.0% identity (100.0% similar) in 113 aa overlap (1-113:1-113) 10 20 30 40 50 60 pF1KE5 MKPSPSQNRRSSDTGSKAPPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MKPSPSQNRRSSDTGSKAPPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPV 10 20 30 40 50 60 70 80 90 100 110 pF1KE5 RPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEVRGE ::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 RPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEVRGE 70 80 90 100 110 >>XP_016858651 (OMIM: 615950,615959) PREDICTED: striated (170 aa) initn: 767 init1: 767 opt: 767 Z-score: 600.6 bits: 116.9 E(85289): 1e-26 Smith-Waterman score: 767; 100.0% identity (100.0% similar) in 113 aa overlap (1-113:58-170) 10 20 30 pF1KE5 MKPSPSQNRRSSDTGSKAPPTFKVSLMDQS :::::::::::::::::::::::::::::: XP_016 FSSPITSDEEYLSPPEEFPEPGETWPRTPTMKPSPSQNRRSSDTGSKAPPTFKVSLMDQS 30 40 50 60 70 80 40 50 60 70 80 90 pF1KE5 VREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGF 90 100 110 120 130 140 100 110 pF1KE5 YTCKAVNEYGARQCEARLEVRGE ::::::::::::::::::::::: XP_016 YTCKAVNEYGARQCEARLEVRGE 150 160 170 >>XP_016858650 (OMIM: 615950,615959) PREDICTED: striated (180 aa) initn: 761 init1: 761 opt: 761 Z-score: 595.8 bits: 116.1 E(85289): 1.9e-26 Smith-Waterman score: 761; 100.0% identity (100.0% similar) in 112 aa overlap (1-112:58-169) 10 20 30 pF1KE5 MKPSPSQNRRSSDTGSKAPPTFKVSLMDQS :::::::::::::::::::::::::::::: XP_016 FSSPITSDEEYLSPPEEFPEPGETWPRTPTMKPSPSQNRRSSDTGSKAPPTFKVSLMDQS 30 40 50 60 70 80 40 50 60 70 80 90 pF1KE5 VREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGF 90 100 110 120 130 140 100 110 pF1KE5 YTCKAVNEYGARQCEARLEVRGE :::::::::::::::::::::: XP_016 YTCKAVNEYGARQCEARLEVRGRGRGGRGDGAV 150 160 170 180 >>XP_016858648 (OMIM: 615950,615959) PREDICTED: striated (1830 aa) initn: 753 init1: 753 opt: 753 Z-score: 577.0 bits: 116.0 E(85289): 2.1e-25 Smith-Waterman score: 753; 100.0% identity (100.0% similar) in 111 aa overlap (1-111:58-168) 10 20 30 pF1KE5 MKPSPSQNRRSSDTGSKAPPTFKVSLMDQS :::::::::::::::::::::::::::::: XP_016 FSSPITSDEEYLSPPEEFPEPGETWPRTPTMKPSPSQNRRSSDTGSKAPPTFKVSLMDQS 30 40 50 60 70 80 40 50 60 70 80 90 pF1KE5 VREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGF 90 100 110 120 130 140 100 110 pF1KE5 YTCKAVNEYGARQCEARLEVRGE ::::::::::::::::::::: XP_016 YTCKAVNEYGARQCEARLEVRAHPESRSLAVLAPLQDVDVGAGEMALFECLVAGPTDVEV 150 160 170 180 190 200 >>XP_006712256 (OMIM: 615950,615959) PREDICTED: striated (2418 aa) initn: 753 init1: 753 opt: 753 Z-score: 575.4 bits: 116.1 E(85289): 2.6e-25 Smith-Waterman score: 753; 100.0% identity (100.0% similar) in 111 aa overlap (1-111:1-111) 10 20 30 40 50 60 pF1KE5 MKPSPSQNRRSSDTGSKAPPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MKPSPSQNRRSSDTGSKAPPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPV 10 20 30 40 50 60 70 80 90 100 110 pF1KE5 RPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEVRGE ::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 RPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEVRAHPESRSLA 70 80 90 100 110 120 XP_006 VLAPLQDVDVGAGEMALFECLVAGPTDVEVDWLCRGRLLQPALLKCKMHFDGRKCKLLLT 130 140 150 160 170 180 >>XP_005246297 (OMIM: 615950,615959) PREDICTED: striated (2418 aa) initn: 753 init1: 753 opt: 753 Z-score: 575.4 bits: 116.1 E(85289): 2.6e-25 Smith-Waterman score: 753; 100.0% identity (100.0% similar) in 111 aa overlap (1-111:1-111) 10 20 30 40 50 60 pF1KE5 MKPSPSQNRRSSDTGSKAPPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MKPSPSQNRRSSDTGSKAPPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPV 10 20 30 40 50 60 70 80 90 100 110 pF1KE5 RPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEVRGE ::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEVRAHPESRSLA 70 80 90 100 110 120 XP_005 VLAPLQDVDVGAGEMALFECLVAGPTDVEVDWLCRGRLLQPALLKCKMHFDGRKCKLLLT 130 140 150 160 170 180 >>XP_016858647 (OMIM: 615950,615959) PREDICTED: striated (2418 aa) initn: 753 init1: 753 opt: 753 Z-score: 575.4 bits: 116.1 E(85289): 2.6e-25 Smith-Waterman score: 753; 100.0% identity (100.0% similar) in 111 aa overlap (1-111:1-111) 10 20 30 40 50 60 pF1KE5 MKPSPSQNRRSSDTGSKAPPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MKPSPSQNRRSSDTGSKAPPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPV 10 20 30 40 50 60 70 80 90 100 110 pF1KE5 RPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEVRGE ::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 RPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEVRAHPESRSLA 70 80 90 100 110 120 XP_016 VLAPLQDVDVGAGEMALFECLVAGPTDVEVDWLCRGRLLQPALLKCKMHFDGRKCKLLLT 130 140 150 160 170 180 >>XP_005246298 (OMIM: 615950,615959) PREDICTED: striated (2418 aa) initn: 753 init1: 753 opt: 753 Z-score: 575.4 bits: 116.1 E(85289): 2.6e-25 Smith-Waterman score: 753; 100.0% identity (100.0% similar) in 111 aa overlap (1-111:1-111) 10 20 30 40 50 60 pF1KE5 MKPSPSQNRRSSDTGSKAPPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MKPSPSQNRRSSDTGSKAPPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPV 10 20 30 40 50 60 70 80 90 100 110 pF1KE5 RPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEVRGE ::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 RPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVNEYGARQCEARLEVRAHPESRSLA 70 80 90 100 110 120 XP_005 VLAPLQDVDVGAGEMALFECLVAGPTDVEVDWLCRGRLLQPALLKCKMHFDGRKCKLLLT 130 140 150 160 170 180 >>XP_005246296 (OMIM: 615950,615959) PREDICTED: striated (2475 aa) initn: 753 init1: 753 opt: 753 Z-score: 575.3 bits: 116.1 E(85289): 2.6e-25 Smith-Waterman score: 753; 100.0% identity (100.0% similar) in 111 aa overlap (1-111:58-168) 10 20 30 pF1KE5 MKPSPSQNRRSSDTGSKAPPTFKVSLMDQS :::::::::::::::::::::::::::::: XP_005 FSSPITSDEEYLSPPEEFPEPGETWPRTPTMKPSPSQNRRSSDTGSKAPPTFKVSLMDQS 30 40 50 60 70 80 40 50 60 70 80 90 pF1KE5 VREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGF 90 100 110 120 130 140 100 110 pF1KE5 YTCKAVNEYGARQCEARLEVRGE ::::::::::::::::::::: XP_005 YTCKAVNEYGARQCEARLEVRAHPESRSLAVLAPLQDVDVGAGEMALFECLVAGPTDVEV 150 160 170 180 190 200 >>XP_005246299 (OMIM: 615950,615959) PREDICTED: striated (2480 aa) initn: 753 init1: 753 opt: 753 Z-score: 575.3 bits: 116.1 E(85289): 2.6e-25 Smith-Waterman score: 753; 100.0% identity (100.0% similar) in 111 aa overlap (1-111:63-173) 10 20 30 pF1KE5 MKPSPSQNRRSSDTGSKAPPTFKVSLMDQS :::::::::::::::::::::::::::::: XP_005 FSSPITSDEEYLSPPEEFPEPGETWPRTPTMKPSPSQNRRSSDTGSKAPPTFKVSLMDQS 40 50 60 70 80 90 40 50 60 70 80 90 pF1KE5 VREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGF 100 110 120 130 140 150 100 110 pF1KE5 YTCKAVNEYGARQCEARLEVRGE ::::::::::::::::::::: XP_005 YTCKAVNEYGARQCEARLEVRAHPESRSLAVLAPLQDVDVGAGEMALFECLVAGPTDVEV 160 170 180 190 200 210 113 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 22:03:01 2016 done: Mon Nov 7 22:03:02 2016 Total Scan time: 3.620 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]