FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5819, 1063 aa 1>>>pF1KE5819 1063 - 1063 aa - 1063 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 9.2660+/-0.00105; mu= 4.5359+/- 0.063 mean_var=225.5790+/-45.983, 0's: 0 Z-trim(111.6): 15 B-trim: 3 in 1/52 Lambda= 0.085394 statistics sampled from 12468 (12476) to 12468 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.717), E-opt: 0.2 (0.383), width: 16 Scan time: 4.560 The best scores are: opt bits E(32554) CCDS11772.1 RNF213 gene_id:57674|Hs108|chr17 (1063) 7201 901.0 0 CCDS58606.1 RNF213 gene_id:57674|Hs108|chr17 (5207) 6841 857.1 0 >>CCDS11772.1 RNF213 gene_id:57674|Hs108|chr17 (1063 aa) initn: 7201 init1: 7201 opt: 7201 Z-score: 4806.0 bits: 901.0 E(32554): 0 Smith-Waterman score: 7201; 99.8% identity (99.8% similar) in 1063 aa overlap (1-1063:1-1063) 10 20 30 40 50 60 pF1KE5 MECPSCQHVSKEETPKFCSQCGERLPPAAPIADSENNNSTMASASEGEMECGQELKEEGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MECPSCQHVSKEETPKFCSQCGERLPPAAPIADSENNNSTMASASEGEMECGQELKEEGG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 PCLFPGSDSWQENPEEPCSKASWTVQESKKKKRKKKKKGNKSASSELASLPLSPASPCHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 PCLFPGSDSWQENPEEPCSKASWTVQESKKKKRKKKKKGNKSASSELASLPLSPASPCHL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 TLLSNPWPQDTALPHSQAQQSGPTGQPSQPPGTATTPLEGDGLSAPTEVGDSPLQAQALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 TLLSNPWPQDTALPHSQAQQSGPTGQPSQPPGTATTPLEGDGLSAPTEVGDSPLQAQALG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 EAGVATGSEAQSSPQFQDHTEGEDQDASIPSGGRGLSQEGTGPPTSAGEGHSRTEDAAQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 EAGVATGSEAQSSPQFQDHTEGEDQDASIPSGGRGLSQEGTGPPTSAGEGHSRTEDAAQE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 LLLPESKGGSSEPGTELQTTEQQAGASASTAVDAVAEPANAVKGAGKEMKEKTQRMKQPP ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: CCDS11 LLLPESKGGSSEPGTELQTTEQQAGASASMAVDAVAEPANAVKGAGKEMKEKTQRMKQPP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 ATTPPFKTHCQEAETKTKDETAAAEEKVGKNEQGEPEDLKKPEGKNRSAAAVKNEKEQKN :::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::: CCDS11 ATTPPFKTHCQEAETKTKDEMAAAEEKVGKNEQGEPEDLKKPEGKNRSAAAVKNEKEQKN 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 QEADVQEVKASTLSPGGGVTVFFHAIISLHFPFNPDLHKVFIRGGEEFGESKWDSNICEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 QEADVQEVKASTLSPGGGVTVFFHAIISLHFPFNPDLHKVFIRGGEEFGESKWDSNICEL 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 HYTRDLGHDRVLVEGIVCISKKHLDKYIPYKYVIYNGESFEYEFIYKHQQKKGEYVNRCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 HYTRDLGHDRVLVEGIVCISKKHLDKYIPYKYVIYNGESFEYEFIYKHQQKKGEYVNRCL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 FIKSSLLGSGDWHQYYDIVYMKPHGRLQKVMNHITDGPRKDLVKGKQIAAALMLDSTFSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 FIKSSLLGSGDWHQYYDIVYMKPHGRLQKVMNHITDGPRKDLVKGKQIAAALMLDSTFSI 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 LQTWDTINLNSFFTQFEQFCFVLQQPMIYEGQAQLWTDLQYREKEVKRYLWQHLKKHVVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 LQTWDTINLNSFFTQFEQFCFVLQQPMIYEGQAQLWTDLQYREKEVKRYLWQHLKKHVVP 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE5 LPDGKSTDFLPVDCPVRSKLKTGLIVLFVVEKIELLLEGSLDWLCHLLTSDASSPDEFHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 LPDGKSTDFLPVDCPVRSKLKTGLIVLFVVEKIELLLEGSLDWLCHLLTSDASSPDEFHR 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE5 DLSHILGIPQSWRLYLVNLCQRCMDTRTYTWLGALPVLHCCMELAPRHKDAWRQPEDTWA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 DLSHILGIPQSWRLYLVNLCQRCMDTRTYTWLGALPVLHCCMELAPRHKDAWRQPEDTWA 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE5 ALEGLSFSPFREQMLDTSSLLQFMREKQHLLSIDEPLFRSWFSLLPLSHLVMYMENFIEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 ALEGLSFSPFREQMLDTSSLLQFMREKQHLLSIDEPLFRSWFSLLPLSHLVMYMENFIEH 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE5 LGRFPAHILDCLSGIYYRLPGLEQVLNTQDVQDVQNVQNILEMLLRLLDTYRDKIPEEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 LGRFPAHILDCLSGIYYRLPGLEQVLNTQDVQDVQNVQNILEMLLRLLDTYRDKIPEEAL 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE5 SPSYLTVCLKLHEAICSSTKLLKFYELPALSAEIVCRMIRLLSLVDSAGQRDETGNNSVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 SPSYLTVCLKLHEAICSSTKLLKFYELPALSAEIVCRMIRLLSLVDSAGQRDETGNNSVQ 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE5 TVFQGTLAATKRWLREVFTKNMLTSSGASFTYVKEIEVWRRLVEIQFPAEHGWKESLLGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 TVFQGTLAATKRWLREVFTKNMLTSSGASFTYVKEIEVWRRLVEIQFPAEHGWKESLLGD 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KE5 MEWRLTKEEPLSQITAYCNSCWDTKGLEDSVAKTFEKCIIEAVSSACQVNNLSSWETDSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS11 MEWRLTKEEPLSQITAYCNSCWDTKGLEDSVAKTFEKCIIEAVSSACQVNNLSSWETDSG 970 980 990 1000 1010 1020 1030 1040 1050 1060 pF1KE5 SQLCSAMTQLRAMKHPLGLSSSANSEIGKWAPSSLAKGNGAEI ::::::::::::::::::::::::::::::::::::::::::: CCDS11 SQLCSAMTQLRAMKHPLGLSSSANSEIGKWAPSSLAKGNGAEI 1030 1040 1050 1060 >>CCDS58606.1 RNF213 gene_id:57674|Hs108|chr17 (5207 aa) initn: 6841 init1: 6841 opt: 6841 Z-score: 4556.5 bits: 857.1 E(32554): 0 Smith-Waterman score: 6841; 99.8% identity (99.8% similar) in 1008 aa overlap (1-1008:1-1008) 10 20 30 40 50 60 pF1KE5 MECPSCQHVSKEETPKFCSQCGERLPPAAPIADSENNNSTMASASEGEMECGQELKEEGG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 MECPSCQHVSKEETPKFCSQCGERLPPAAPIADSENNNSTMASASEGEMECGQELKEEGG 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 PCLFPGSDSWQENPEEPCSKASWTVQESKKKKRKKKKKGNKSASSELASLPLSPASPCHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 PCLFPGSDSWQENPEEPCSKASWTVQESKKKKRKKKKKGNKSASSELASLPLSPASPCHL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 TLLSNPWPQDTALPHSQAQQSGPTGQPSQPPGTATTPLEGDGLSAPTEVGDSPLQAQALG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 TLLSNPWPQDTALPHSQAQQSGPTGQPSQPPGTATTPLEGDGLSAPTEVGDSPLQAQALG 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 EAGVATGSEAQSSPQFQDHTEGEDQDASIPSGGRGLSQEGTGPPTSAGEGHSRTEDAAQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 EAGVATGSEAQSSPQFQDHTEGEDQDASIPSGGRGLSQEGTGPPTSAGEGHSRTEDAAQE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 LLLPESKGGSSEPGTELQTTEQQAGASASTAVDAVAEPANAVKGAGKEMKEKTQRMKQPP ::::::::::::::::::::::::::::: :::::::::::::::::::::::::::::: CCDS58 LLLPESKGGSSEPGTELQTTEQQAGASASMAVDAVAEPANAVKGAGKEMKEKTQRMKQPP 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 ATTPPFKTHCQEAETKTKDETAAAEEKVGKNEQGEPEDLKKPEGKNRSAAAVKNEKEQKN :::::::::::::::::::: ::::::::::::::::::::::::::::::::::::::: CCDS58 ATTPPFKTHCQEAETKTKDEMAAAEEKVGKNEQGEPEDLKKPEGKNRSAAAVKNEKEQKN 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 QEADVQEVKASTLSPGGGVTVFFHAIISLHFPFNPDLHKVFIRGGEEFGESKWDSNICEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 QEADVQEVKASTLSPGGGVTVFFHAIISLHFPFNPDLHKVFIRGGEEFGESKWDSNICEL 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 HYTRDLGHDRVLVEGIVCISKKHLDKYIPYKYVIYNGESFEYEFIYKHQQKKGEYVNRCL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 HYTRDLGHDRVLVEGIVCISKKHLDKYIPYKYVIYNGESFEYEFIYKHQQKKGEYVNRCL 430 440 450 460 470 480 490 500 510 520 530 540 pF1KE5 FIKSSLLGSGDWHQYYDIVYMKPHGRLQKVMNHITDGPRKDLVKGKQIAAALMLDSTFSI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 FIKSSLLGSGDWHQYYDIVYMKPHGRLQKVMNHITDGPRKDLVKGKQIAAALMLDSTFSI 490 500 510 520 530 540 550 560 570 580 590 600 pF1KE5 LQTWDTINLNSFFTQFEQFCFVLQQPMIYEGQAQLWTDLQYREKEVKRYLWQHLKKHVVP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 LQTWDTINLNSFFTQFEQFCFVLQQPMIYEGQAQLWTDLQYREKEVKRYLWQHLKKHVVP 550 560 570 580 590 600 610 620 630 640 650 660 pF1KE5 LPDGKSTDFLPVDCPVRSKLKTGLIVLFVVEKIELLLEGSLDWLCHLLTSDASSPDEFHR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 LPDGKSTDFLPVDCPVRSKLKTGLIVLFVVEKIELLLEGSLDWLCHLLTSDASSPDEFHR 610 620 630 640 650 660 670 680 690 700 710 720 pF1KE5 DLSHILGIPQSWRLYLVNLCQRCMDTRTYTWLGALPVLHCCMELAPRHKDAWRQPEDTWA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 DLSHILGIPQSWRLYLVNLCQRCMDTRTYTWLGALPVLHCCMELAPRHKDAWRQPEDTWA 670 680 690 700 710 720 730 740 750 760 770 780 pF1KE5 ALEGLSFSPFREQMLDTSSLLQFMREKQHLLSIDEPLFRSWFSLLPLSHLVMYMENFIEH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 ALEGLSFSPFREQMLDTSSLLQFMREKQHLLSIDEPLFRSWFSLLPLSHLVMYMENFIEH 730 740 750 760 770 780 790 800 810 820 830 840 pF1KE5 LGRFPAHILDCLSGIYYRLPGLEQVLNTQDVQDVQNVQNILEMLLRLLDTYRDKIPEEAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 LGRFPAHILDCLSGIYYRLPGLEQVLNTQDVQDVQNVQNILEMLLRLLDTYRDKIPEEAL 790 800 810 820 830 840 850 860 870 880 890 900 pF1KE5 SPSYLTVCLKLHEAICSSTKLLKFYELPALSAEIVCRMIRLLSLVDSAGQRDETGNNSVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 SPSYLTVCLKLHEAICSSTKLLKFYELPALSAEIVCRMIRLLSLVDSAGQRDETGNNSVQ 850 860 870 880 890 900 910 920 930 940 950 960 pF1KE5 TVFQGTLAATKRWLREVFTKNMLTSSGASFTYVKEIEVWRRLVEIQFPAEHGWKESLLGD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 TVFQGTLAATKRWLREVFTKNMLTSSGASFTYVKEIEVWRRLVEIQFPAEHGWKESLLGD 910 920 930 940 950 960 970 980 990 1000 1010 1020 pF1KE5 MEWRLTKEEPLSQITAYCNSCWDTKGLEDSVAKTFEKCIIEAVSSACQVNNLSSWETDSG :::::::::::::::::::::::::::::::::::::::::::::::: CCDS58 MEWRLTKEEPLSQITAYCNSCWDTKGLEDSVAKTFEKCIIEAVSSACQSQTSILQGFSYS 970 980 990 1000 1010 1020 1030 1040 1050 1060 pF1KE5 SQLCSAMTQLRAMKHPLGLSSSANSEIGKWAPSSLAKGNGAEI CCDS58 DLRKFGIVLSAVITKSWPRTADNFDDILKHLLTLADVKHVFRLCGTDEKILANVTEDAKR 1030 1040 1050 1060 1070 1080 1063 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 06:54:57 2016 done: Tue Nov 8 06:54:58 2016 Total Scan time: 4.560 Total Display time: 0.050 Function used was FASTA [36.3.4 Apr, 2011]