FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5566, 439 aa 1>>>pF1KE5566 439 - 439 aa - 439 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 5.8899+/-0.000395; mu= 14.3745+/- 0.025 mean_var=79.3843+/-16.469, 0's: 0 Z-trim(112.7): 32 B-trim: 24 in 1/52 Lambda= 0.143948 statistics sampled from 21746 (21769) to 21746 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.631), E-opt: 0.2 (0.255), width: 16 Scan time: 7.830 The best scores are: opt bits E(85289) NP_001171730 (OMIM: 609134) E3 ubiquitin-protein l ( 439) 3002 633.4 3.6e-181 XP_016866085 (OMIM: 609134) PREDICTED: E3 ubiquiti (1754) 2926 617.9 6.5e-176 XP_005249022 (OMIM: 609134) PREDICTED: E3 ubiquiti (1755) 2926 617.9 6.5e-176 NP_056070 (OMIM: 609134) E3 ubiquitin-protein liga (1755) 2846 601.3 6.5e-171 XP_016866086 (OMIM: 609134) PREDICTED: E3 ubiquiti (1260) 2773 586.0 1.8e-166 XP_016866084 (OMIM: 609134) PREDICTED: E3 ubiquiti (1781) 2773 586.1 2.4e-166 XP_011512740 (OMIM: 609134) PREDICTED: E3 ubiquiti (1782) 2773 586.1 2.4e-166 XP_016866083 (OMIM: 609134) PREDICTED: E3 ubiquiti (1782) 2693 569.5 2.4e-161 NP_777576 (OMIM: 243800,605981) E3 ubiquitin-prote (1749) 1433 307.8 1.4e-82 XP_016858848 (OMIM: 613831) PREDICTED: E3 ubiquiti (1247) 306 73.7 3e-12 XP_016858847 (OMIM: 613831) PREDICTED: E3 ubiquiti (1478) 306 73.7 3.5e-12 XP_011508906 (OMIM: 613831) PREDICTED: E3 ubiquiti (1514) 306 73.8 3.6e-12 XP_016858846 (OMIM: 613831) PREDICTED: E3 ubiquiti (1514) 306 73.8 3.6e-12 XP_016858845 (OMIM: 613831) PREDICTED: E3 ubiquiti (1612) 306 73.8 3.8e-12 NP_742067 (OMIM: 613831) E3 ubiquitin-protein liga (1888) 306 73.8 4.3e-12 XP_006712334 (OMIM: 613831) PREDICTED: E3 ubiquiti (1891) 306 73.8 4.3e-12 XP_006712332 (OMIM: 613831) PREDICTED: E3 ubiquiti (1892) 306 73.8 4.3e-12 XP_005246357 (OMIM: 613831) PREDICTED: E3 ubiquiti (1899) 306 73.8 4.3e-12 XP_006712331 (OMIM: 613831) PREDICTED: E3 ubiquiti (1902) 306 73.8 4.3e-12 XP_005246356 (OMIM: 613831) PREDICTED: E3 ubiquiti (1903) 306 73.8 4.3e-12 XP_006712333 (OMIM: 613831) PREDICTED: E3 ubiquiti (1855) 287 69.9 6.5e-11 >>NP_001171730 (OMIM: 609134) E3 ubiquitin-protein ligas (439 aa) initn: 3002 init1: 3002 opt: 3002 Z-score: 3373.6 bits: 633.4 E(85289): 3.6e-181 Smith-Waterman score: 3002; 100.0% identity (100.0% similar) in 439 aa overlap (1-439:1-439) 10 20 30 40 50 60 pF1KE5 MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHYVPKIYCRGPNPFPQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHYVPKIYCRGPNPFPQK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 EDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFKVGEPTYSCRDCAVDPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 EDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFKVGEPTYSCRDCAVDPT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 CVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHELNTSEIEEEEDPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 CVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHELNTSEIEEEEDPL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 VHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVEKSDTYYCMLFNDEVHTYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 VHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVEKSDTYYCMLFNDEVHTYE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 QVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCEQAKSVIVRNTSRQTKPLKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCEQAKSVIVRNTSRQTKPLKV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 QVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGLQEGPDGENSSLVDRLMLSDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 QVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGLQEGPDGENSSLVDRLMLSDS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 KLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYERLQSDYVTDDHDREFSVADLSVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 KLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYERLQSDYVTDDHDREFSVADLSVQ 370 380 390 400 410 420 430 pF1KE5 IFTVPSLFSISAGRSGSPL ::::::::::::::::::: NP_001 IFTVPSLFSISAGRSGSPL 430 >>XP_016866085 (OMIM: 609134) PREDICTED: E3 ubiquitin-pr (1754 aa) initn: 2926 init1: 2926 opt: 2926 Z-score: 3279.2 bits: 617.9 E(85289): 6.5e-176 Smith-Waterman score: 2926; 100.0% identity (100.0% similar) in 427 aa overlap (1-427:1-427) 10 20 30 40 50 60 pF1KE5 MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHYVPKIYCRGPNPFPQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHYVPKIYCRGPNPFPQK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 EDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFKVGEPTYSCRDCAVDPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFKVGEPTYSCRDCAVDPT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 CVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHELNTSEIEEEEDPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 CVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHELNTSEIEEEEDPL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 VHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVEKSDTYYCMLFNDEVHTYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVEKSDTYYCMLFNDEVHTYE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 QVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCEQAKSVIVRNTSRQTKPLKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCEQAKSVIVRNTSRQTKPLKV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 QVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGLQEGPDGENSSLVDRLMLSDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 QVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGLQEGPDGENSSLVDRLMLSDS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 KLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYERLQSDYVTDDHDREFSVADLSVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYERLQSDYVTDDHDREFSVADLSVQ 370 380 390 400 410 420 430 pF1KE5 IFTVPSLFSISAGRSGSPL ::::::: XP_016 IFTVPSLARMLITEENLMSIIIKTFMDHLRHRDAQGRFQFERYTALQAFKFRRVQSLILD 430 440 450 460 470 480 >>XP_005249022 (OMIM: 609134) PREDICTED: E3 ubiquitin-pr (1755 aa) initn: 2926 init1: 2926 opt: 2926 Z-score: 3279.2 bits: 617.9 E(85289): 6.5e-176 Smith-Waterman score: 2926; 100.0% identity (100.0% similar) in 427 aa overlap (1-427:1-427) 10 20 30 40 50 60 pF1KE5 MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHYVPKIYCRGPNPFPQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHYVPKIYCRGPNPFPQK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 EDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFKVGEPTYSCRDCAVDPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 EDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFKVGEPTYSCRDCAVDPT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 CVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHELNTSEIEEEEDPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 CVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHELNTSEIEEEEDPL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 VHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVEKSDTYYCMLFNDEVHTYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 VHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVEKSDTYYCMLFNDEVHTYE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 QVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCEQAKSVIVRNTSRQTKPLKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCEQAKSVIVRNTSRQTKPLKV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 QVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGLQEGPDGENSSLVDRLMLSDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 QVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGLQEGPDGENSSLVDRLMLSDS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 KLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYERLQSDYVTDDHDREFSVADLSVQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_005 KLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYERLQSDYVTDDHDREFSVADLSVQ 370 380 390 400 410 420 430 pF1KE5 IFTVPSLFSISAGRSGSPL ::::::: XP_005 IFTVPSLARMLITEENLMSIIIKTFMDHLRHRDAQGRFQFERYTALQAFKFRRVQSLILD 430 440 450 460 470 480 >>NP_056070 (OMIM: 609134) E3 ubiquitin-protein ligase U (1755 aa) initn: 2846 init1: 2846 opt: 2846 Z-score: 3189.4 bits: 601.3 E(85289): 6.5e-171 Smith-Waterman score: 2846; 96.7% identity (98.8% similar) in 427 aa overlap (1-427:1-427) 10 20 30 40 50 60 pF1KE5 MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHYVPKIYCRGPNPFPQK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHYVPKIYCRGPNPFPQK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 EDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFKVGEPTYSCRDCAVDPT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 EDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFKVGEPTYSCRDCAVDPT 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 CVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHELNTSEIEEEEDPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 CVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHELNTSEIEEEEDPL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 VHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVEKSDTYYCMLFNDEVHTYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 VHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVEKSDTYYCMLFNDEVHTYE 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 QVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCEQAKSVIVRNTSRQTKPLKV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 QVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCEQAKSVIVRNTSRQTKPLKV 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 QVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGLQEGPDGENSSLVDRLMLSDS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_056 QVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGLQEGPDGENSSLVDRLMLSDS 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 KLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYERLQSDYVTDDHDREFSVADLSVQ ::::::::::::::::::::::::::::::::::::..:: :.. :::.: ::. :::: NP_056 KLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYQQLQRDFMEDDHERAVSVTALSVQ 370 380 390 400 410 420 430 pF1KE5 IFTVPSLFSISAGRSGSPL .::.:.: NP_056 FFTAPTLARMLITEENLMSIIIKTFMDHLRHRDAQGRFQFERYTALQAFKFRRVQSLILD 430 440 450 460 470 480 >>XP_016866086 (OMIM: 609134) PREDICTED: E3 ubiquitin-pr (1260 aa) initn: 2773 init1: 2773 opt: 2773 Z-score: 3109.6 bits: 586.0 E(85289): 1.8e-166 Smith-Waterman score: 2773; 100.0% identity (100.0% similar) in 402 aa overlap (26-427:53-454) 10 20 30 40 50 pF1KE5 MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHYVPKIYCRGPN :::::::::::::::::::::::::::::: XP_016 AAPVGRNRLLDVLEQPDPDLGKQLCRPSPCGKWLQATDLTREVYQHLAHYVPKIYCRGPN 30 40 50 60 70 80 60 70 80 90 100 110 pF1KE5 PFPQKEDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFKVGEPTYSCRDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PFPQKEDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFKVGEPTYSCRDC 90 100 110 120 130 140 120 130 140 150 160 170 pF1KE5 AVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHELNTSEIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHELNTSEIEE 150 160 170 180 190 200 180 190 200 210 220 230 pF1KE5 EEDPLVHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVEKSDTYYCMLFNDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EEDPLVHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVEKSDTYYCMLFNDE 210 220 230 240 250 260 240 250 260 270 280 290 pF1KE5 VHTYEQVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCEQAKSVIVRNTSRQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VHTYEQVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCEQAKSVIVRNTSRQT 270 280 290 300 310 320 300 310 320 330 340 350 pF1KE5 KPLKVQVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGLQEGPDGENSSLVDRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KPLKVQVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGLQEGPDGENSSLVDRL 330 340 350 360 370 380 360 370 380 390 400 410 pF1KE5 MLSDSKLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYERLQSDYVTDDHDREFSVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MLSDSKLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYERLQSDYVTDDHDREFSVA 390 400 410 420 430 440 420 430 pF1KE5 DLSVQIFTVPSLFSISAGRSGSPL :::::::::::: XP_016 DLSVQIFTVPSLARMLITEENLMSIIIKTFMDHLRHRDAQGRFQFERYTALQAFKFRRVQ 450 460 470 480 490 500 >>XP_016866084 (OMIM: 609134) PREDICTED: E3 ubiquitin-pr (1781 aa) initn: 2773 init1: 2773 opt: 2773 Z-score: 3107.3 bits: 586.1 E(85289): 2.4e-166 Smith-Waterman score: 2773; 100.0% identity (100.0% similar) in 402 aa overlap (26-427:53-454) 10 20 30 40 50 pF1KE5 MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHYVPKIYCRGPN :::::::::::::::::::::::::::::: XP_016 AAPVGRNRLLDVLEQPDPDLGKQLCRPSPCGKWLQATDLTREVYQHLAHYVPKIYCRGPN 30 40 50 60 70 80 60 70 80 90 100 110 pF1KE5 PFPQKEDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFKVGEPTYSCRDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PFPQKEDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFKVGEPTYSCRDC 90 100 110 120 130 140 120 130 140 150 160 170 pF1KE5 AVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHELNTSEIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHELNTSEIEE 150 160 170 180 190 200 180 190 200 210 220 230 pF1KE5 EEDPLVHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVEKSDTYYCMLFNDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EEDPLVHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVEKSDTYYCMLFNDE 210 220 230 240 250 260 240 250 260 270 280 290 pF1KE5 VHTYEQVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCEQAKSVIVRNTSRQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VHTYEQVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCEQAKSVIVRNTSRQT 270 280 290 300 310 320 300 310 320 330 340 350 pF1KE5 KPLKVQVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGLQEGPDGENSSLVDRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KPLKVQVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGLQEGPDGENSSLVDRL 330 340 350 360 370 380 360 370 380 390 400 410 pF1KE5 MLSDSKLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYERLQSDYVTDDHDREFSVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 MLSDSKLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYERLQSDYVTDDHDREFSVA 390 400 410 420 430 440 420 430 pF1KE5 DLSVQIFTVPSLFSISAGRSGSPL :::::::::::: XP_016 DLSVQIFTVPSLARMLITEENLMSIIIKTFMDHLRHRDAQGRFQFERYTALQAFKFRRVQ 450 460 470 480 490 500 >>XP_011512740 (OMIM: 609134) PREDICTED: E3 ubiquitin-pr (1782 aa) initn: 2773 init1: 2773 opt: 2773 Z-score: 3107.3 bits: 586.1 E(85289): 2.4e-166 Smith-Waterman score: 2773; 100.0% identity (100.0% similar) in 402 aa overlap (26-427:53-454) 10 20 30 40 50 pF1KE5 MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHYVPKIYCRGPN :::::::::::::::::::::::::::::: XP_011 AAPVGRNRLLDVLEQPDPDLGKQLCRPSPCGKWLQATDLTREVYQHLAHYVPKIYCRGPN 30 40 50 60 70 80 60 70 80 90 100 110 pF1KE5 PFPQKEDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFKVGEPTYSCRDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PFPQKEDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFKVGEPTYSCRDC 90 100 110 120 130 140 120 130 140 150 160 170 pF1KE5 AVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHELNTSEIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 AVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHELNTSEIEE 150 160 170 180 190 200 180 190 200 210 220 230 pF1KE5 EEDPLVHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVEKSDTYYCMLFNDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 EEDPLVHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVEKSDTYYCMLFNDE 210 220 230 240 250 260 240 250 260 270 280 290 pF1KE5 VHTYEQVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCEQAKSVIVRNTSRQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 VHTYEQVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCEQAKSVIVRNTSRQT 270 280 290 300 310 320 300 310 320 330 340 350 pF1KE5 KPLKVQVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGLQEGPDGENSSLVDRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 KPLKVQVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGLQEGPDGENSSLVDRL 330 340 350 360 370 380 360 370 380 390 400 410 pF1KE5 MLSDSKLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYERLQSDYVTDDHDREFSVA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MLSDSKLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYERLQSDYVTDDHDREFSVA 390 400 410 420 430 440 420 430 pF1KE5 DLSVQIFTVPSLFSISAGRSGSPL :::::::::::: XP_011 DLSVQIFTVPSLARMLITEENLMSIIIKTFMDHLRHRDAQGRFQFERYTALQAFKFRRVQ 450 460 470 480 490 500 >>XP_016866083 (OMIM: 609134) PREDICTED: E3 ubiquitin-pr (1782 aa) initn: 2693 init1: 2693 opt: 2693 Z-score: 3017.5 bits: 569.5 E(85289): 2.4e-161 Smith-Waterman score: 2693; 96.5% identity (98.8% similar) in 402 aa overlap (26-427:53-454) 10 20 30 40 50 pF1KE5 MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHYVPKIYCRGPN :::::::::::::::::::::::::::::: XP_016 AAPVGRNRLLDVLEQPDPDLGKQLCRPSPCGKWLQATDLTREVYQHLAHYVPKIYCRGPN 30 40 50 60 70 80 60 70 80 90 100 110 pF1KE5 PFPQKEDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFKVGEPTYSCRDC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 PFPQKEDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFKVGEPTYSCRDC 90 100 110 120 130 140 120 130 140 150 160 170 pF1KE5 AVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHELNTSEIEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 AVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHELNTSEIEE 150 160 170 180 190 200 180 190 200 210 220 230 pF1KE5 EEDPLVHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVEKSDTYYCMLFNDE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 EEDPLVHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVEKSDTYYCMLFNDE 210 220 230 240 250 260 240 250 260 270 280 290 pF1KE5 VHTYEQVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCEQAKSVIVRNTSRQT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 VHTYEQVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCEQAKSVIVRNTSRQT 270 280 290 300 310 320 300 310 320 330 340 350 pF1KE5 KPLKVQVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGLQEGPDGENSSLVDRL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_016 KPLKVQVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGLQEGPDGENSSLVDRL 330 340 350 360 370 380 360 370 380 390 400 410 pF1KE5 MLSDSKLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYERLQSDYVTDDHDREFSVA :::::::::::::::::::::::::::::::::::::::::..:: :.. :::.: ::. XP_016 MLSDSKLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYQQLQRDFMEDDHERAVSVT 390 400 410 420 430 440 420 430 pF1KE5 DLSVQIFTVPSLFSISAGRSGSPL ::::.::.:.: XP_016 ALSVQFFTAPTLARMLITEENLMSIIIKTFMDHLRHRDAQGRFQFERYTALQAFKFRRVQ 450 460 470 480 490 500 >>NP_777576 (OMIM: 243800,605981) E3 ubiquitin-protein l (1749 aa) initn: 1332 init1: 870 opt: 1433 Z-score: 1603.5 bits: 307.8 E(85289): 1.4e-82 Smith-Waterman score: 1433; 48.8% identity (78.9% similar) in 412 aa overlap (17-427:18-427) 10 20 30 40 50 pF1KE5 MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAHYVPKIYCRGPNPFPQ : . ...:. : : .:. .:::. ::.:: .: . NP_777 MADEEAGGTERMEISAELPQTPQRLASWWDQQVDFYTAFLHHLAQLVPEIYFAEMDPDLE 10 20 30 40 50 60 60 70 80 90 100 110 pF1KE5 KEDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRVFKVGEPTYSCRDCAVDP :.. .: .. :.:::: :::: . . ::.... .::::::: :: ::::::::.:: NP_777 KQEESVQMSIFTPLEWYLFGEDPDICLEKLKHSGA-FQLCGRVFKSGETTYSCRDCAIDP 70 80 90 100 110 120 130 140 150 160 170 pF1KE5 TCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEGPYCQKHELNTSEIEEEEDP ::::::.:: :.:..:::.: :: :::::::::::::: ::.: .:: . . .: . NP_777 TCVLCMDCFQDSVHKNHRYKMHTSTGGGFCDCGDTEAWKTGPFCVNHEPGRAGTIKE-NS 120 130 140 150 160 170 180 190 200 210 220 230 pF1KE5 LVHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADLEMVEKSDTYYCMLFNDEVHTY :.:.::... .:: ...:.::. ::.:.::: .:.. ::.. :::.::::: :.: NP_777 RCPLNEEVIVQARKIFPSVIKYVVEMTIWEEEKELPPELQIREKNERYYCVLFNDEHHSY 180 190 200 210 220 230 240 250 260 270 280 290 pF1KE5 EQVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGDFQYCEQAKSVIVRNTSRQTK-PL ..:::.::.:..: :: .:..:..:::.:. : . :..:: : .. .. :: NP_777 DHVIYSLQRALDCELAEAQLHTTAIDKEGRRAVKAGAYAACQEAKEDIKSHSENVSQHPL 240 250 260 270 280 290 300 310 320 330 340 350 pF1KE5 KVQVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRILCQVGLQEGPDGENSSLVDRLMLS .:.:.:: :.:::.:.:.: ::...:..::. .:.:.::. :.: ::.:: :..:::: NP_777 HVEVLHSEIMAHQKFALRLGSWMNKIMSYSSDFRQIFCQACLREEPDSENPCLISRLMLW 300 310 320 330 340 350 360 370 380 390 400 410 pF1KE5 DSKLWKGARSVYHQLFMSSLLMDLKYKKLFAVRFAKNYERLQSDYVTDDHDREFSVADLS :.::.::::.. :.:..::..:...::::::..:.: :..::..:..::::: .:.. :: NP_777 DAKLYKGARKILHELIFSSFFMEMEYKKLFAMEFVKYYKQLQKEYISDDHDRSISITALS 360 370 380 390 400 410 420 430 pF1KE5 VQIFTVPSLFSISAGRSGSPL ::.::::.: NP_777 VQMFTVPTLARHLIEEQNVISVITETLLEVLPEYLDRNNKFNFQGYSQDKLGRVYAVICD 420 430 440 450 460 470 >>XP_016858848 (OMIM: 613831) PREDICTED: E3 ubiquitin-pr (1247 aa) initn: 285 init1: 257 opt: 306 Z-score: 340.8 bits: 73.7 E(85289): 3e-12 Smith-Waterman score: 308; 24.7% identity (54.2% similar) in 373 aa overlap (73-423:91-452) 50 60 70 80 90 pF1KE5 AHYVPKIYCRGPNPFPQKEDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANK---PSHLC .:: : . :. .. : . :. :: XP_016 AERPLAAAAGGEDAAAAGGGGGPGAAEEEALEWCKCLLAGGGGYDEFCAAVRAYDPAALC 70 80 90 100 110 120 100 110 120 130 140 150 pF1KE5 GRVFKVGEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKE : :. .. .: :: :...: :: ::: . : : . : : .:: :::::... .: XP_016 GLVWTANFVAYRCRTCGISPCMSLCAECFHQGDHTGHDFNMFRSQAGGACDCGDSNVMRE 130 140 150 160 170 180 160 170 180 190 200 210 pF1KE5 GPYCQKHEL-NTSEIEEEEDPLVHLSEDVIARTYNIFAITFR--YAVEILTWEKESELPA . .:..:.. ..:.: :. .:: :. : . .: : .:..: XP_016 SGFCKRHQIKSSSNIPCVPKDLLMMSEFVLPRFIFCLIQYLREGYNEPAADGPSEKDLNK 190 200 210 220 230 240 220 230 240 250 260 270 pF1KE5 DLEMVEKSDTYYCML--FNDEVHTY-EQVIYTLQKAVNCTQKEAIGFATTVDRDGRR--- :...: . .. : .. ... ::. . :. . :. ..: . : .. .. XP_016 VLQLLEPQISFLEDLTKMGGAMRSVLTQVLTNQQNYKDLTS--GLGENACVKKSHEKYLI 250 260 270 280 290 280 290 300 310 320 330 pF1KE5 SVRYGDFQYCEQAKSVIVRNTSRQTKPLKVQVMHSSIVAHQNFGLKLLSWLGSIIGYSDG ... . . : :. :.. : :. : :: . : : ..: : . : :.: XP_016 ALKSSGLTYPEDKLVYGVQEPSAGTSSLAVQ---GFIGATGTLGQVDSSDEDDQDG-SQG 300 310 320 330 340 350 340 350 360 370 380 pF1KE5 LRRILCQVGLQEGPDGENSSLVDRL----MLSDSKLWKGARSVYHQL--FMSSLLMDLKY : . .: :. : ...:..: : .: . .: ... :. ..: : .: XP_016 LGK-RKRVKLSSGT--KDQSIMDVLKHKSFLEELLFWTIKYEFPQKMVTFLLNMLPDQEY 360 370 380 390 400 410 390 400 410 420 430 pF1KE5 KKLFAVRFAKNY----ERLQSDYVTDDHDREFSVADLSVQIFTVPSLFSISAGRSGSPL : :. :...: . :.... .: . . .. .:::.:. XP_016 KVAFTKTFVQHYAFIMKTLKKSHESDTMSNR--IVHISVQLFSNEELARQVTEECQLLDI 420 430 440 450 460 XP_016 MVTVLLYMMESCLIKSELQDEENSLHVVVNCGEALLKNNTYWPLVSDFINILSHQSVAKR 470 480 490 500 510 520 439 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 01:53:49 2016 done: Tue Nov 8 01:53:50 2016 Total Scan time: 7.830 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]