FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE6579, 144 aa 1>>>pF1KE6579 144 - 144 aa - 144 aa Library: /omim/omim.rfq.tfa 60827320 residues in 85289 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.9647+/-0.000266; mu= 1.3952+/- 0.017 mean_var=164.4770+/-34.497, 0's: 0 Z-trim(124.8): 7 B-trim: 1508 in 2/55 Lambda= 0.100005 statistics sampled from 47259 (47268) to 47259 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.857), E-opt: 0.2 (0.554), width: 16 Scan time: 3.780 The best scores are: opt bits E(85289) NP_001094090 (OMIM: 603872) tastin isoform 2 [Homo ( 144) 1012 156.1 1.8e-38 NP_001265253 (OMIM: 603872) tastin isoform 3 [Homo ( 126) 778 122.3 2.3e-28 XP_011536027 (OMIM: 603872) PREDICTED: tastin isof ( 126) 778 122.3 2.3e-28 NP_005471 (OMIM: 603872) tastin isoform 1 [Homo sa ( 778) 786 124.0 4.5e-28 XP_011536025 (OMIM: 603872) PREDICTED: tastin isof ( 823) 786 124.0 4.7e-28 XP_006719244 (OMIM: 603872) PREDICTED: tastin isof ( 868) 786 124.0 4.9e-28 >>NP_001094090 (OMIM: 603872) tastin isoform 2 [Homo sap (144 aa) initn: 1012 init1: 1012 opt: 1012 Z-score: 811.7 bits: 156.1 E(85289): 1.8e-38 Smith-Waterman score: 1012; 100.0% identity (100.0% similar) in 144 aa overlap (1-144:1-144) 10 20 30 40 50 60 pF1KE6 MTTRQATKDPLLRGVSPTPSKIPVRSQKRTPFPTVTSCAVDQENQDPRRWVQKPPLNIQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MTTRQATKDPLLRGVSPTPSKIPVRSQKRTPFPTVTSCAVDQENQDPRRWVQKPPLNIQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 PLVDSAGPRPKARHQAETSQRLVGISQPRNPLEELRPSPRGQNVGPGPPAQTVLVPAPGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PLVDSAGPRPKARHQAETSQRLVGISQPRNPLEELRPSPRGQNVGPGPPAQTVLVPAPGK 70 80 90 100 110 120 130 140 pF1KE6 LFALRRSPFPPAKCHLARCHGLYL :::::::::::::::::::::::: NP_001 LFALRRSPFPPAKCHLARCHGLYL 130 140 >>NP_001265253 (OMIM: 603872) tastin isoform 3 [Homo sap (126 aa) initn: 778 init1: 778 opt: 778 Z-score: 630.1 bits: 122.3 E(85289): 2.3e-28 Smith-Waterman score: 778; 100.0% identity (100.0% similar) in 112 aa overlap (1-112:1-112) 10 20 30 40 50 60 pF1KE6 MTTRQATKDPLLRGVSPTPSKIPVRSQKRTPFPTVTSCAVDQENQDPRRWVQKPPLNIQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 MTTRQATKDPLLRGVSPTPSKIPVRSQKRTPFPTVTSCAVDQENQDPRRWVQKPPLNIQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 PLVDSAGPRPKARHQAETSQRLVGISQPRNPLEELRPSPRGQNVGPGPPAQTVLVPAPGK :::::::::::::::::::::::::::::::::::::::::::::::::::: NP_001 PLVDSAGPRPKARHQAETSQRLVGISQPRNPLEELRPSPRGQNVGPGPPAQTGAMACTCN 70 80 90 100 110 120 130 140 pF1KE6 LFALRRSPFPPAKCHLARCHGLYL NP_001 HSYSGG >>XP_011536027 (OMIM: 603872) PREDICTED: tastin isoform (126 aa) initn: 778 init1: 778 opt: 778 Z-score: 630.1 bits: 122.3 E(85289): 2.3e-28 Smith-Waterman score: 778; 100.0% identity (100.0% similar) in 112 aa overlap (1-112:1-112) 10 20 30 40 50 60 pF1KE6 MTTRQATKDPLLRGVSPTPSKIPVRSQKRTPFPTVTSCAVDQENQDPRRWVQKPPLNIQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MTTRQATKDPLLRGVSPTPSKIPVRSQKRTPFPTVTSCAVDQENQDPRRWVQKPPLNIQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 PLVDSAGPRPKARHQAETSQRLVGISQPRNPLEELRPSPRGQNVGPGPPAQTVLVPAPGK :::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 PLVDSAGPRPKARHQAETSQRLVGISQPRNPLEELRPSPRGQNVGPGPPAQTGAMACTCN 70 80 90 100 110 120 130 140 pF1KE6 LFALRRSPFPPAKCHLARCHGLYL XP_011 HSYSGG >>NP_005471 (OMIM: 603872) tastin isoform 1 [Homo sapien (778 aa) initn: 831 init1: 778 opt: 786 Z-score: 625.0 bits: 124.0 E(85289): 4.5e-28 Smith-Waterman score: 786; 82.9% identity (85.6% similar) in 146 aa overlap (1-138:1-143) 10 20 30 40 50 60 pF1KE6 MTTRQATKDPLLRGVSPTPSKIPVRSQKRTPFPTVTSCAVDQENQDPRRWVQKPPLNIQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP_005 MTTRQATKDPLLRGVSPTPSKIPVRSQKRTPFPTVTSCAVDQENQDPRRWVQKPPLNIQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 PLVDSAGPRPKARHQAETSQRLVGISQPRNPLEELRPSPRGQNVGPGPPAQTVLVPAPGK :::::::::::::::::::::::::::::::::::::::::::::::::::: ::: NP_005 PLVDSAGPRPKARHQAETSQRLVGISQPRNPLEELRPSPRGQNVGPGPPAQT---EAPGT 70 80 90 100 110 130 140 pF1KE6 L--------FALRRSPFPPAKCHLARCHGLYL . .: : .:::.: NP_005 IEFVADPAALATILSGEGVKSCHLGRQPSLAKRVLVRGSQGGTTQRVQGVRASAYLAPRT 120 130 140 150 160 170 >>XP_011536025 (OMIM: 603872) PREDICTED: tastin isoform (823 aa) initn: 831 init1: 778 opt: 786 Z-score: 624.7 bits: 124.0 E(85289): 4.7e-28 Smith-Waterman score: 786; 82.9% identity (85.6% similar) in 146 aa overlap (1-138:1-143) 10 20 30 40 50 60 pF1KE6 MTTRQATKDPLLRGVSPTPSKIPVRSQKRTPFPTVTSCAVDQENQDPRRWVQKPPLNIQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_011 MTTRQATKDPLLRGVSPTPSKIPVRSQKRTPFPTVTSCAVDQENQDPRRWVQKPPLNIQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 PLVDSAGPRPKARHQAETSQRLVGISQPRNPLEELRPSPRGQNVGPGPPAQTVLVPAPGK :::::::::::::::::::::::::::::::::::::::::::::::::::: ::: XP_011 PLVDSAGPRPKARHQAETSQRLVGISQPRNPLEELRPSPRGQNVGPGPPAQT---EAPGT 70 80 90 100 110 130 140 pF1KE6 L--------FALRRSPFPPAKCHLARCHGLYL . .: : .:::.: XP_011 IEFVADPAALATILSGEGVKSCHLGRQPSLAKRVLVRGSQGGTTQRVQGVRASAYLAPRT 120 130 140 150 160 170 >>XP_006719244 (OMIM: 603872) PREDICTED: tastin isoform (868 aa) initn: 831 init1: 778 opt: 786 Z-score: 624.4 bits: 124.0 E(85289): 4.9e-28 Smith-Waterman score: 786; 82.9% identity (85.6% similar) in 146 aa overlap (1-138:1-143) 10 20 30 40 50 60 pF1KE6 MTTRQATKDPLLRGVSPTPSKIPVRSQKRTPFPTVTSCAVDQENQDPRRWVQKPPLNIQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: XP_006 MTTRQATKDPLLRGVSPTPSKIPVRSQKRTPFPTVTSCAVDQENQDPRRWVQKPPLNIQR 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE6 PLVDSAGPRPKARHQAETSQRLVGISQPRNPLEELRPSPRGQNVGPGPPAQTVLVPAPGK :::::::::::::::::::::::::::::::::::::::::::::::::::: ::: XP_006 PLVDSAGPRPKARHQAETSQRLVGISQPRNPLEELRPSPRGQNVGPGPPAQT---EAPGT 70 80 90 100 110 130 140 pF1KE6 L--------FALRRSPFPPAKCHLARCHGLYL . .: : .:::.: XP_006 IEFVADPAALATILSGEGVKSCHLGRQPSLAKRVLVRGSQGGTTQRVQGVRASAYLAPRT 120 130 140 150 160 170 144 residues in 1 query sequences 60827320 residues in 85289 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 14:33:45 2016 done: Tue Nov 8 14:33:45 2016 Total Scan time: 3.780 Total Display time: -0.020 Function used was FASTA [36.3.4 Apr, 2011]