FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE5651, 523 aa 1>>>pF1KE5651 523 - 523 aa - 523 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 7.4215+/-0.000817; mu= 10.6120+/- 0.049 mean_var=158.5223+/-31.828, 0's: 0 Z-trim(112.8): 11 B-trim: 9 in 1/50 Lambda= 0.101866 statistics sampled from 13490 (13501) to 13490 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.745), E-opt: 0.2 (0.415), width: 16 Scan time: 3.440 The best scores are: opt bits E(32554) CCDS33164.1 EIF2B4 gene_id:8890|Hs108|chr2 ( 523) 3396 510.9 1.5e-144 CCDS46244.1 EIF2B4 gene_id:8890|Hs108|chr2 ( 522) 3379 508.4 8.3e-144 CCDS82432.1 EIF2B4 gene_id:8890|Hs108|chr2 ( 544) 3341 502.8 4.1e-142 CCDS46245.1 EIF2B4 gene_id:8890|Hs108|chr2 ( 543) 3324 500.3 2.3e-141 >>CCDS33164.1 EIF2B4 gene_id:8890|Hs108|chr2 (523 aa) initn: 3396 init1: 3396 opt: 3396 Z-score: 2708.8 bits: 510.9 E(32554): 1.5e-144 Smith-Waterman score: 3396; 100.0% identity (100.0% similar) in 523 aa overlap (1-523:1-523) 10 20 30 40 50 60 pF1KE5 MAAVAVAVREDSGSGMKAELPPGPGAVGREMTKEEKLQLRKEKKQQKKKRKEEKGAEPET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 MAAVAVAVREDSGSGMKAELPPGPGAVGREMTKEEKLQLRKEKKQQKKKRKEEKGAEPET 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 GSAVSAAQCQVGPTRELPESGIQLGTPREKVPAGRSKAELRAERRAKQEAERALKQARKG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 GSAVSAAQCQVGPTRELPESGIQLGTPREKVPAGRSKAELRAERRAKQEAERALKQARKG 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE5 EQGGPPPKASPSTAGETPSGVKRLPEYPQVDDLLLRRLVKKPERQQVPTRKDYGSKVSLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 EQGGPPPKASPSTAGETPSGVKRLPEYPQVDDLLLRRLVKKPERQQVPTRKDYGSKVSLF 130 140 150 160 170 180 190 200 210 220 230 240 pF1KE5 SHLPQYSRQNSLTQFMSIPSSVIHPAMVRLGLQYSQGLVSGSNARCIALLRALQQVIQDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 SHLPQYSRQNSLTQFMSIPSSVIHPAMVRLGLQYSQGLVSGSNARCIALLRALQQVIQDY 190 200 210 220 230 240 250 260 270 280 290 300 pF1KE5 TTPPNEELSRDLVNKLKPYMSFLTQCRPLSASMHNAIKFLNKEITSVGSSKREEEAKSEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 TTPPNEELSRDLVNKLKPYMSFLTQCRPLSASMHNAIKFLNKEITSVGSSKREEEAKSEL 250 260 270 280 290 300 310 320 330 340 350 360 pF1KE5 RAAIDRYVQEKIVLAAQAISRFAYQKISNGDVILVYGCSSLVSRILQEAWTEGRRFRVVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 RAAIDRYVQEKIVLAAQAISRFAYQKISNGDVILVYGCSSLVSRILQEAWTEGRRFRVVV 310 320 330 340 350 360 370 380 390 400 410 420 pF1KE5 VDSRPWLEGRHTLRSLVHAGVPASYLLIPAASYVLPEVSKVLLGAHALLANGSVMSRVGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 VDSRPWLEGRHTLRSLVHAGVPASYLLIPAASYVLPEVSKVLLGAHALLANGSVMSRVGT 370 380 390 400 410 420 430 440 450 460 470 480 pF1KE5 AQLALVARAHNVPVLVCCETYKFCERVQTDAFVSNELDDPDDLQCKRGEHVALANWQNHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS33 AQLALVARAHNVPVLVCCETYKFCERVQTDAFVSNELDDPDDLQCKRGEHVALANWQNHA 430 440 450 460 470 480 490 500 510 520 pF1KE5 SLRLLNLVYDVTPPELVDLVITELGMIPCSSVPVVLRVKSSDQ ::::::::::::::::::::::::::::::::::::::::::: CCDS33 SLRLLNLVYDVTPPELVDLVITELGMIPCSSVPVVLRVKSSDQ 490 500 510 520 >>CCDS46244.1 EIF2B4 gene_id:8890|Hs108|chr2 (522 aa) initn: 2979 init1: 2979 opt: 3379 Z-score: 2695.3 bits: 508.4 E(32554): 8.3e-144 Smith-Waterman score: 3379; 99.8% identity (99.8% similar) in 523 aa overlap (1-523:1-522) 10 20 30 40 50 60 pF1KE5 MAAVAVAVREDSGSGMKAELPPGPGAVGREMTKEEKLQLRKEKKQQKKKRKEEKGAEPET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 MAAVAVAVREDSGSGMKAELPPGPGAVGREMTKEEKLQLRKEKKQQKKKRKEEKGAEPET 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE5 GSAVSAAQCQVGPTRELPESGIQLGTPREKVPAGRSKAELRAERRAKQEAERALKQARKG :::::::::: ::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 GSAVSAAQCQ-GPTRELPESGIQLGTPREKVPAGRSKAELRAERRAKQEAERALKQARKG 70 80 90 100 110 130 140 150 160 170 180 pF1KE5 EQGGPPPKASPSTAGETPSGVKRLPEYPQVDDLLLRRLVKKPERQQVPTRKDYGSKVSLF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 EQGGPPPKASPSTAGETPSGVKRLPEYPQVDDLLLRRLVKKPERQQVPTRKDYGSKVSLF 120 130 140 150 160 170 190 200 210 220 230 240 pF1KE5 SHLPQYSRQNSLTQFMSIPSSVIHPAMVRLGLQYSQGLVSGSNARCIALLRALQQVIQDY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 SHLPQYSRQNSLTQFMSIPSSVIHPAMVRLGLQYSQGLVSGSNARCIALLRALQQVIQDY 180 190 200 210 220 230 250 260 270 280 290 300 pF1KE5 TTPPNEELSRDLVNKLKPYMSFLTQCRPLSASMHNAIKFLNKEITSVGSSKREEEAKSEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 TTPPNEELSRDLVNKLKPYMSFLTQCRPLSASMHNAIKFLNKEITSVGSSKREEEAKSEL 240 250 260 270 280 290 310 320 330 340 350 360 pF1KE5 RAAIDRYVQEKIVLAAQAISRFAYQKISNGDVILVYGCSSLVSRILQEAWTEGRRFRVVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 RAAIDRYVQEKIVLAAQAISRFAYQKISNGDVILVYGCSSLVSRILQEAWTEGRRFRVVV 300 310 320 330 340 350 370 380 390 400 410 420 pF1KE5 VDSRPWLEGRHTLRSLVHAGVPASYLLIPAASYVLPEVSKVLLGAHALLANGSVMSRVGT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 VDSRPWLEGRHTLRSLVHAGVPASYLLIPAASYVLPEVSKVLLGAHALLANGSVMSRVGT 360 370 380 390 400 410 430 440 450 460 470 480 pF1KE5 AQLALVARAHNVPVLVCCETYKFCERVQTDAFVSNELDDPDDLQCKRGEHVALANWQNHA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 AQLALVARAHNVPVLVCCETYKFCERVQTDAFVSNELDDPDDLQCKRGEHVALANWQNHA 420 430 440 450 460 470 490 500 510 520 pF1KE5 SLRLLNLVYDVTPPELVDLVITELGMIPCSSVPVVLRVKSSDQ ::::::::::::::::::::::::::::::::::::::::::: CCDS46 SLRLLNLVYDVTPPELVDLVITELGMIPCSSVPVVLRVKSSDQ 480 490 500 510 520 >>CCDS82432.1 EIF2B4 gene_id:8890|Hs108|chr2 (544 aa) initn: 3341 init1: 3341 opt: 3341 Z-score: 2664.9 bits: 502.8 E(32554): 4.1e-142 Smith-Waterman score: 3341; 100.0% identity (100.0% similar) in 513 aa overlap (11-523:32-544) 10 20 30 40 pF1KE5 MAAVAVAVREDSGSGMKAELPPGPGAVGREMTKEEKLQLR :::::::::::::::::::::::::::::: CCDS82 PTQQPAAPSTRAPKPSRSLSGSLCALFSDADSGSGMKAELPPGPGAVGREMTKEEKLQLR 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE5 KEKKQQKKKRKEEKGAEPETGSAVSAAQCQVGPTRELPESGIQLGTPREKVPAGRSKAEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 KEKKQQKKKRKEEKGAEPETGSAVSAAQCQVGPTRELPESGIQLGTPREKVPAGRSKAEL 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE5 RAERRAKQEAERALKQARKGEQGGPPPKASPSTAGETPSGVKRLPEYPQVDDLLLRRLVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 RAERRAKQEAERALKQARKGEQGGPPPKASPSTAGETPSGVKRLPEYPQVDDLLLRRLVK 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE5 KPERQQVPTRKDYGSKVSLFSHLPQYSRQNSLTQFMSIPSSVIHPAMVRLGLQYSQGLVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 KPERQQVPTRKDYGSKVSLFSHLPQYSRQNSLTQFMSIPSSVIHPAMVRLGLQYSQGLVS 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE5 GSNARCIALLRALQQVIQDYTTPPNEELSRDLVNKLKPYMSFLTQCRPLSASMHNAIKFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 GSNARCIALLRALQQVIQDYTTPPNEELSRDLVNKLKPYMSFLTQCRPLSASMHNAIKFL 250 260 270 280 290 300 290 300 310 320 330 340 pF1KE5 NKEITSVGSSKREEEAKSELRAAIDRYVQEKIVLAAQAISRFAYQKISNGDVILVYGCSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 NKEITSVGSSKREEEAKSELRAAIDRYVQEKIVLAAQAISRFAYQKISNGDVILVYGCSS 310 320 330 340 350 360 350 360 370 380 390 400 pF1KE5 LVSRILQEAWTEGRRFRVVVVDSRPWLEGRHTLRSLVHAGVPASYLLIPAASYVLPEVSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 LVSRILQEAWTEGRRFRVVVVDSRPWLEGRHTLRSLVHAGVPASYLLIPAASYVLPEVSK 370 380 390 400 410 420 410 420 430 440 450 460 pF1KE5 VLLGAHALLANGSVMSRVGTAQLALVARAHNVPVLVCCETYKFCERVQTDAFVSNELDDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 VLLGAHALLANGSVMSRVGTAQLALVARAHNVPVLVCCETYKFCERVQTDAFVSNELDDP 430 440 450 460 470 480 470 480 490 500 510 520 pF1KE5 DDLQCKRGEHVALANWQNHASLRLLNLVYDVTPPELVDLVITELGMIPCSSVPVVLRVKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS82 DDLQCKRGEHVALANWQNHASLRLLNLVYDVTPPELVDLVITELGMIPCSSVPVVLRVKS 490 500 510 520 530 540 pF1KE5 SDQ ::: CCDS82 SDQ >>CCDS46245.1 EIF2B4 gene_id:8890|Hs108|chr2 (543 aa) initn: 2979 init1: 2979 opt: 3324 Z-score: 2651.4 bits: 500.3 E(32554): 2.3e-141 Smith-Waterman score: 3324; 99.8% identity (99.8% similar) in 513 aa overlap (11-523:32-543) 10 20 30 40 pF1KE5 MAAVAVAVREDSGSGMKAELPPGPGAVGREMTKEEKLQLR :::::::::::::::::::::::::::::: CCDS46 PTQQPAAPSTRAPKPSRSLSGSLCALFSDADSGSGMKAELPPGPGAVGREMTKEEKLQLR 10 20 30 40 50 60 50 60 70 80 90 100 pF1KE5 KEKKQQKKKRKEEKGAEPETGSAVSAAQCQVGPTRELPESGIQLGTPREKVPAGRSKAEL :::::::::::::::::::::::::::::: ::::::::::::::::::::::::::::: CCDS46 KEKKQQKKKRKEEKGAEPETGSAVSAAQCQ-GPTRELPESGIQLGTPREKVPAGRSKAEL 70 80 90 100 110 120 110 120 130 140 150 160 pF1KE5 RAERRAKQEAERALKQARKGEQGGPPPKASPSTAGETPSGVKRLPEYPQVDDLLLRRLVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 RAERRAKQEAERALKQARKGEQGGPPPKASPSTAGETPSGVKRLPEYPQVDDLLLRRLVK 130 140 150 160 170 180 170 180 190 200 210 220 pF1KE5 KPERQQVPTRKDYGSKVSLFSHLPQYSRQNSLTQFMSIPSSVIHPAMVRLGLQYSQGLVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 KPERQQVPTRKDYGSKVSLFSHLPQYSRQNSLTQFMSIPSSVIHPAMVRLGLQYSQGLVS 190 200 210 220 230 240 230 240 250 260 270 280 pF1KE5 GSNARCIALLRALQQVIQDYTTPPNEELSRDLVNKLKPYMSFLTQCRPLSASMHNAIKFL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 GSNARCIALLRALQQVIQDYTTPPNEELSRDLVNKLKPYMSFLTQCRPLSASMHNAIKFL 250 260 270 280 290 300 290 300 310 320 330 340 pF1KE5 NKEITSVGSSKREEEAKSELRAAIDRYVQEKIVLAAQAISRFAYQKISNGDVILVYGCSS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 NKEITSVGSSKREEEAKSELRAAIDRYVQEKIVLAAQAISRFAYQKISNGDVILVYGCSS 310 320 330 340 350 360 350 360 370 380 390 400 pF1KE5 LVSRILQEAWTEGRRFRVVVVDSRPWLEGRHTLRSLVHAGVPASYLLIPAASYVLPEVSK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 LVSRILQEAWTEGRRFRVVVVDSRPWLEGRHTLRSLVHAGVPASYLLIPAASYVLPEVSK 370 380 390 400 410 420 410 420 430 440 450 460 pF1KE5 VLLGAHALLANGSVMSRVGTAQLALVARAHNVPVLVCCETYKFCERVQTDAFVSNELDDP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 VLLGAHALLANGSVMSRVGTAQLALVARAHNVPVLVCCETYKFCERVQTDAFVSNELDDP 430 440 450 460 470 480 470 480 490 500 510 520 pF1KE5 DDLQCKRGEHVALANWQNHASLRLLNLVYDVTPPELVDLVITELGMIPCSSVPVVLRVKS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS46 DDLQCKRGEHVALANWQNHASLRLLNLVYDVTPPELVDLVITELGMIPCSSVPVVLRVKS 490 500 510 520 530 540 pF1KE5 SDQ ::: CCDS46 SDQ 523 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Nov 8 05:33:59 2016 done: Tue Nov 8 05:34:00 2016 Total Scan time: 3.440 Total Display time: 0.040 Function used was FASTA [36.3.4 Apr, 2011]