FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KE2714, 221 aa 1>>>pF1KE2714 221 - 221 aa - 221 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.0392+/-0.000744; mu= 4.2816+/- 0.046 mean_var=176.5709+/-35.437, 0's: 0 Z-trim(115.7): 3 B-trim: 15 in 1/52 Lambda= 0.096519 statistics sampled from 16297 (16300) to 16297 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.795), E-opt: 0.2 (0.501), width: 16 Scan time: 1.040 The best scores are: opt bits E(32554) CCDS48022.1 MVB12B gene_id:89853|Hs108|chr9 ( 221) 1521 222.6 1.6e-58 CCDS35142.1 MVB12B gene_id:89853|Hs108|chr9 ( 319) 1521 222.7 2.1e-58 >>CCDS48022.1 MVB12B gene_id:89853|Hs108|chr9 (221 aa) initn: 1521 init1: 1521 opt: 1521 Z-score: 1164.2 bits: 222.6 E(32554): 1.6e-58 Smith-Waterman score: 1521; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221) 10 20 30 40 50 60 pF1KE2 MRSCFCVRRSRDPPPPQPPPPPPQRGTDQSTMPEVKDLSEALPETSMDPITGVGVVASRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 MRSCFCVRRSRDPPPPQPPPPPPQRGTDQSTMPEVKDLSEALPETSMDPITGVGVVASRN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 RAPTGYDVVAQTADGVDADLWKDGLFKSKVTRYLCFTRSFSKENSHLGNVLVDMKLIDIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 RAPTGYDVVAQTADGVDADLWKDGLFKSKVTRYLCFTRSFSKENSHLGNVLVDMKLIDIK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 DTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDSTEAAICDIRIMGRTKQAPPQYTFIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS48 DTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDSTEAAICDIRIMGRTKQAPPQYTFIG 130 140 150 160 170 180 190 200 210 220 pF1KE2 ELNSMGIWYRMGRVPRNHDSSQPTTPSQSSAASTPAPNLPR ::::::::::::::::::::::::::::::::::::::::: CCDS48 ELNSMGIWYRMGRVPRNHDSSQPTTPSQSSAASTPAPNLPR 190 200 210 220 >>CCDS35142.1 MVB12B gene_id:89853|Hs108|chr9 (319 aa) initn: 1521 init1: 1521 opt: 1521 Z-score: 1161.9 bits: 222.7 E(32554): 2.1e-58 Smith-Waterman score: 1521; 100.0% identity (100.0% similar) in 221 aa overlap (1-221:1-221) 10 20 30 40 50 60 pF1KE2 MRSCFCVRRSRDPPPPQPPPPPPQRGTDQSTMPEVKDLSEALPETSMDPITGVGVVASRN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 MRSCFCVRRSRDPPPPQPPPPPPQRGTDQSTMPEVKDLSEALPETSMDPITGVGVVASRN 10 20 30 40 50 60 70 80 90 100 110 120 pF1KE2 RAPTGYDVVAQTADGVDADLWKDGLFKSKVTRYLCFTRSFSKENSHLGNVLVDMKLIDIK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 RAPTGYDVVAQTADGVDADLWKDGLFKSKVTRYLCFTRSFSKENSHLGNVLVDMKLIDIK 70 80 90 100 110 120 130 140 150 160 170 180 pF1KE2 DTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDSTEAAICDIRIMGRTKQAPPQYTFIG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS35 DTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDSTEAAICDIRIMGRTKQAPPQYTFIG 130 140 150 160 170 180 190 200 210 220 pF1KE2 ELNSMGIWYRMGRVPRNHDSSQPTTPSQSSAASTPAPNLPR ::::::::::::::::::::::::::::::::::::::::: CCDS35 ELNSMGIWYRMGRVPRNHDSSQPTTPSQSSAASTPAPNLPRHISLTLPATFRGRNSTRTD 190 200 210 220 230 240 CCDS35 YEYQHSNLYAISAMDGVPFMISEKFSCVPESMQPFDLLGITIKSLAEIEKEYEYSFRTEQ 250 260 270 280 290 300 221 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Tue Jan 30 11:05:29 2018 done: Tue Jan 30 11:05:29 2018 Total Scan time: 1.040 Total Display time: 0.020 Function used was FASTA [36.3.4 Apr, 2011]