FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB6210, 722 aa 1>>>pF1KB6210 722 - 722 aa - 722 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 15.3510+/-0.00107; mu= -23.3631+/- 0.064 mean_var=770.5160+/-175.777, 0's: 0 Z-trim(118.8): 95 B-trim: 0 in 0/54 Lambda= 0.046204 statistics sampled from 19751 (19845) to 19751 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.839), E-opt: 0.2 (0.61), width: 16 Scan time: 3.700 The best scores are: opt bits E(32554) CCDS9568.1 ZNF219 gene_id:51222|Hs108|chr14 ( 722) 5159 359.3 1.2e-98 >>CCDS9568.1 ZNF219 gene_id:51222|Hs108|chr14 (722 aa) initn: 5159 init1: 5159 opt: 5159 Z-score: 1884.4 bits: 359.3 E(32554): 1.2e-98 Smith-Waterman score: 5159; 99.9% identity (99.9% similar) in 722 aa overlap (1-722:1-722) 10 20 30 40 50 60 pF1KB6 MEGSRPRAPSGHLAPSPPAFDGELDLQRYSNGPAVSAGSLGMGAVSWSESRAGERRFPCP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 MEGSRPRAPSGHLAPSPPAFDGELDLQRYSNGPAVSAGSLGMGAVSWSESRAGERRFPCP 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB6 VCGKRFRFNSILALHLRAHPGAQAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 VCGKRFRFNSILALHLRAHPGAQAFQCPHCGHRAAQRALLRSHLRTHQPERPRSPAARLL 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB6 LELEERALLREARLGRARSSGGMQATPATEGLARPQAPSSSAFRCPYCKGKFRTSAERER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 LELEERALLREARLGRARSSGGMQATPATEGLARPQAPSSSAFRCPYCKGKFRTSAERER 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB6 HLHILHRPWKCGLCSFGSSQEEELLHHSLTAHGAPERPLAATSAAPPPQPQPQPPPQPEP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 HLHILHRPWKCGLCSFGSSQEEELLHHSLTAHGAPERPLAATSAAPPPQPQPQPPPQPEP 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB6 RSVPQPEPEPEPEREATPTTAPAAPEEPPAPPEFRCQVCGQSFTQSWFLKGHMRKHKASF ::::::::::::::::::: :::::::::::::::::::::::::::::::::::::::: CCDS95 RSVPQPEPEPEPEREATPTPAPAAPEEPPAPPEFRCQVCGQSFTQSWFLKGHMRKHKASF 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB6 DHACPVCGRCFKEPWFLKNHMKVHASKLGPLRAPGPASGPARAPQPPDLGLLAYEPLGPA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 DHACPVCGRCFKEPWFLKNHMKVHASKLGPLRAPGPASGPARAPQPPDLGLLAYEPLGPA 310 320 330 340 350 360 370 380 390 400 410 420 pF1KB6 LLLAPAPTPAERREPPSLLGYLSLRAGEGRPNGEGAEPGPGRSFGGFRPLSSALPARARR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 LLLAPAPTPAERREPPSLLGYLSLRAGEGRPNGEGAEPGPGRSFGGFRPLSSALPARARR 370 380 390 400 410 420 430 440 450 460 470 480 pF1KB6 HRAEEPEEEEEVVEAEEETWARGRSLGSLASLHPRPGEGPGHSASAAGAQARSTATQEEN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 HRAEEPEEEEEVVEAEEETWARGRSLGSLASLHPRPGEGPGHSASAAGAQARSTATQEEN 430 440 450 460 470 480 490 500 510 520 530 540 pF1KB6 GLLVGGTRPEGGRGATGKDCPFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 GLLVGGTRPEGGRGATGKDCPFCGKSFRSAHHLKVHLRVHTGERPYKCPHCDYAGTQSGS 490 500 510 520 530 540 550 560 570 580 590 600 pF1KB6 LKYHLQRHHREQRSGAGPGPPPEPPPPSQRGSAPQSGAKPSPQPATWVEGASSPRPPSSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 LKYHLQRHHREQRSGAGPGPPPEPPPPSQRGSAPQSGAKPSPQPATWVEGASSPRPPSSG 550 560 570 580 590 600 610 620 630 640 650 660 pF1KB6 AGPGSRRKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGPGGALHRCLFCPFATGAPEL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 AGPGSRRKPASPGRTLRNGRGGEAEPLDLSLRAGPGGEAGPGGALHRCLFCPFATGAPEL 610 620 630 640 650 660 670 680 690 700 710 720 pF1KB6 MALHLQVHHSRRARGRRPPQADASPPYARVPSGETPPSPSQEGEEGSGLSRPGEAGLGGQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS95 MALHLQVHHSRRARGRRPPQADASPPYARVPSGETPPSPSQEGEEGSGLSRPGEAGLGGQ 670 680 690 700 710 720 pF1KB6 ER :: CCDS95 ER 722 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Mon Nov 7 18:50:58 2016 done: Mon Nov 7 18:50:58 2016 Total Scan time: 3.700 Total Display time: 0.000 Function used was FASTA [36.3.4 Apr, 2011]