Result of FASTA (ccds) for
pFN21AE1584
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KE1584, 92 aa
1>>>pF1KE1584 92 - 92 aa - 92 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 4.5997+/-0.000535; mu= 12.8760+/- 0.032
mean_var=55.3377+/-10.862, 0's: 0 Z-trim(113.4): 48 B-trim: 288 in 2/48
Lambda= 0.172410
statistics sampled from 14011 (14066) to 14011 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.809), E-opt: 0.2 (0.432), width: 16
Scan time: 1.420
The best scores are: opt bits E(32554)
CCDS11308.1 CCL4 gene_id:6351|Hs108|chr17 ( 92) 624 161.9 5e-41
CCDS32627.2 CCL4L2 gene_id:9560|Hs108|chr17 ( 87) 546 142.5 3.3e-35
CCDS77002.1 CCL4L2 gene_id:9560|Hs108|chr17 ( 96) 429 113.4 2e-26
CCDS77001.1 CCL4L2 gene_id:9560|Hs108|chr17 ( 103) 421 111.5 8.6e-26
CCDS32626.1 CCL3L3 gene_id:414062|Hs108|chr17 ( 93) 418 110.7 1.3e-25
CCDS76999.1 CCL4L2 gene_id:9560|Hs108|chr17 ( 64) 414 109.6 2e-25
CCDS77004.1 CCL4L2 gene_id:9560|Hs108|chr17 ( 64) 414 109.6 2e-25
CCDS77003.1 CCL4L2 gene_id:9560|Hs108|chr17 ( 86) 414 109.7 2.5e-25
CCDS77000.1 CCL4L2 gene_id:9560|Hs108|chr17 ( 103) 414 109.7 2.9e-25
CCDS11307.1 CCL3 gene_id:6348|Hs108|chr17 ( 92) 395 105.0 7e-24
CCDS11300.1 CCL5 gene_id:6352|Hs108|chr17 ( 91) 324 87.3 1.4e-18
CCDS32624.1 CCL14 gene_id:6358|Hs108|chr17 ( 93) 306 82.8 3.2e-17
CCDS11306.1 CCL18 gene_id:6362|Hs108|chr17 ( 89) 282 76.8 2e-15
CCDS45652.1 CCL14 gene_id:6358|Hs108|chr17 ( 109) 280 76.4 3.2e-15
CCDS11281.1 CCL13 gene_id:6357|Hs108|chr17 ( 98) 264 72.4 4.7e-14
CCDS11278.1 CCL7 gene_id:6354|Hs108|chr17 ( 99) 258 70.9 1.3e-13
CCDS11303.1 CCL16 gene_id:6360|Hs108|chr17 ( 120) 246 68.0 1.2e-12
CCDS11280.1 CCL8 gene_id:6355|Hs108|chr17 ( 99) 240 66.4 3e-12
CCDS11279.1 CCL11 gene_id:6356|Hs108|chr17 ( 97) 239 66.2 3.5e-12
CCDS11277.1 CCL2 gene_id:6347|Hs108|chr17 ( 99) 233 64.7 1e-11
CCDS5578.1 CCL26 gene_id:10344|Hs108|chr7 ( 94) 230 63.9 1.6e-11
>>CCDS11308.1 CCL4 gene_id:6351|Hs108|chr17 (92 aa)
initn: 624 init1: 624 opt: 624 Z-score: 850.1 bits: 161.9 E(32554): 5e-41
Smith-Waterman score: 624; 98.9% identity (100.0% similar) in 92 aa overlap (1-92:1-92)
10 20 30 40 50 60
pF1KE1 MKLCVTVLSLLMLVAAFCSPALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MKLCVTVLSLLMLVAAFCSPALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
10 20 30 40 50 60
70 80 90
pF1KE1 PAVVFQTKRSKQVCADPSETWVQEYVYDLELN
:::::::::::::::::::.::::::::::::
CCDS11 PAVVFQTKRSKQVCADPSESWVQEYVYDLELN
70 80 90
>>CCDS32627.2 CCL4L2 gene_id:9560|Hs108|chr17 (87 aa)
initn: 552 init1: 414 opt: 546 Z-score: 745.6 bits: 142.5 E(32554): 3.3e-35
Smith-Waterman score: 546; 90.2% identity (93.5% similar) in 92 aa overlap (1-92:1-87)
10 20 30 40 50 60
pF1KE1 MKLCVTVLSLLMLVAAFCSPALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
:::::::::::.::::::: ::::::::::::::::::::::::::::::::::::::::
CCDS32 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
10 20 30 40 50 60
70 80 90
pF1KE1 PAVVFQTKRSKQVCADPSETWVQEYVYDLELN
:::: .:::::::::.::::::::::::
CCDS32 PAVV-----GKQVCADPSESWVQEYVYDLELN
70 80
>>CCDS77002.1 CCL4L2 gene_id:9560|Hs108|chr17 (96 aa)
initn: 414 init1: 414 opt: 429 Z-score: 587.7 bits: 113.4 E(32554): 2e-26
Smith-Waterman score: 429; 81.5% identity (85.2% similar) in 81 aa overlap (1-81:1-81)
10 20 30 40 50 60
pF1KE1 MKLCVTVLSLLMLVAAFCSPALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
:::::::::::.::::::: ::::::::::::::::::::::::::::::::::::::::
CCDS77 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
10 20 30 40 50 60
70 80 90
pF1KE1 PAVVFQTKRSKQVCADPSETWVQEYVYDLELN
:::: : .. : : :
CCDS77 PAVVAAPGRIPSTRAAPHGPWSGRGRCLPQARDKAR
70 80 90
>>CCDS77001.1 CCL4L2 gene_id:9560|Hs108|chr17 (103 aa)
initn: 421 init1: 421 opt: 421 Z-score: 576.5 bits: 111.5 E(32554): 8.6e-26
Smith-Waterman score: 421; 90.0% identity (95.7% similar) in 70 aa overlap (1-70:1-70)
10 20 30 40 50 60
pF1KE1 MKLCVTVLSLLMLVAAFCSPALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
:::::::::::.::::::: ::::::::::::::::::::::::::::::::::::::::
CCDS77 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
10 20 30 40 50 60
70 80 90
pF1KE1 PAVVFQTKRSKQVCADPSETWVQEYVYDLELN
::::.. . :
CCDS77 PAVVYRESASSAAPGRIPSTRAAPHGPWSGRGRCLPQARDKAR
70 80 90 100
>>CCDS32626.1 CCL3L3 gene_id:414062|Hs108|chr17 (93 aa)
initn: 413 init1: 378 opt: 418 Z-score: 573.1 bits: 110.7 E(32554): 1.3e-25
Smith-Waterman score: 418; 58.7% identity (90.2% similar) in 92 aa overlap (1-92:1-92)
10 20 30 40 50 60
pF1KE1 MKLCVTVLSLLMLVAAFCSPALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
:.. ...:..:. . :.:. .::::...: :::::::::.:..:.::..::.:::: ::.
CCDS32 MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK
10 20 30 40 50 60
70 80 90
pF1KE1 PAVVFQTKRSKQVCADPSETWVQEYVYDLELN
:.:.: :::..:::::::: :::.:: ::::.
CCDS32 PSVIFLTKRGRQVCADPSEEWVQKYVSDLELSA
70 80 90
>>CCDS76999.1 CCL4L2 gene_id:9560|Hs108|chr17 (64 aa)
initn: 414 init1: 414 opt: 414 Z-score: 570.0 bits: 109.6 E(32554): 2e-25
Smith-Waterman score: 414; 96.9% identity (98.4% similar) in 64 aa overlap (1-64:1-64)
10 20 30 40 50 60
pF1KE1 MKLCVTVLSLLMLVAAFCSPALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
:::::::::::.::::::: ::::::::::::::::::::::::::::::::::::::::
CCDS76 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
10 20 30 40 50 60
70 80 90
pF1KE1 PAVVFQTKRSKQVCADPSETWVQEYVYDLELN
::::
CCDS76 PAVV
>>CCDS77004.1 CCL4L2 gene_id:9560|Hs108|chr17 (64 aa)
initn: 414 init1: 414 opt: 414 Z-score: 570.0 bits: 109.6 E(32554): 2e-25
Smith-Waterman score: 414; 96.9% identity (98.4% similar) in 64 aa overlap (1-64:1-64)
10 20 30 40 50 60
pF1KE1 MKLCVTVLSLLMLVAAFCSPALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
:::::::::::.::::::: ::::::::::::::::::::::::::::::::::::::::
CCDS77 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
10 20 30 40 50 60
70 80 90
pF1KE1 PAVVFQTKRSKQVCADPSETWVQEYVYDLELN
::::
CCDS77 PAVV
>>CCDS77003.1 CCL4L2 gene_id:9560|Hs108|chr17 (86 aa)
initn: 414 init1: 414 opt: 414 Z-score: 568.2 bits: 109.7 E(32554): 2.5e-25
Smith-Waterman score: 414; 96.9% identity (98.4% similar) in 64 aa overlap (1-64:1-64)
10 20 30 40 50 60
pF1KE1 MKLCVTVLSLLMLVAAFCSPALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
:::::::::::.::::::: ::::::::::::::::::::::::::::::::::::::::
CCDS77 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
10 20 30 40 50 60
70 80 90
pF1KE1 PAVVFQTKRSKQVCADPSETWVQEYVYDLELN
::::
CCDS77 PAVVAAPHGPWSGRGRCLPQARDKAR
70 80
>>CCDS77000.1 CCL4L2 gene_id:9560|Hs108|chr17 (103 aa)
initn: 414 init1: 414 opt: 414 Z-score: 567.1 bits: 109.7 E(32554): 2.9e-25
Smith-Waterman score: 414; 96.9% identity (98.4% similar) in 64 aa overlap (1-64:1-64)
10 20 30 40 50 60
pF1KE1 MKLCVTVLSLLMLVAAFCSPALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
:::::::::::.::::::: ::::::::::::::::::::::::::::::::::::::::
CCDS77 MKLCVTVLSLLVLVAAFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
10 20 30 40 50 60
70 80 90
pF1KE1 PAVVFQTKRSKQVCADPSETWVQEYVYDLELN
::::
CCDS77 PAVVEWKLQGVCFQCCSGKDPIHQSCPTWTMVRQRKMPTTGKG
70 80 90 100
>>CCDS11307.1 CCL3 gene_id:6348|Hs108|chr17 (92 aa)
initn: 388 init1: 366 opt: 395 Z-score: 542.3 bits: 105.0 E(32554): 7e-24
Smith-Waterman score: 395; 57.6% identity (88.0% similar) in 92 aa overlap (1-92:1-91)
10 20 30 40 50 60
pF1KE1 MKLCVTVLSLLMLVAAFCSPALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCSQ
:.. ...:..:. . :.:. .:: ...: :::::::::.:..:.::..::.:::: ::.
CCDS11 MQVSTAALAVLLCTMALCNQ-FSASLAADTPTACCFSYTSRQIPQNFIADYFETSSQCSK
10 20 30 40 50
70 80 90
pF1KE1 PAVVFQTKRSKQVCADPSETWVQEYVYDLELN
:.:.: ::::.:::::::: :::.:: ::::.
CCDS11 PGVIFLTKRSRQVCADPSEEWVQKYVSDLELSA
60 70 80 90
92 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Mon Nov 7 16:32:37 2016 done: Mon Nov 7 16:32:37 2016
Total Scan time: 1.420 Total Display time: -0.020
Function used was FASTA [36.3.4 Apr, 2011]